BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00008692
         (1432 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004134625.1| PREDICTED: F-box protein SKIP19-like [Cucumi...   186   1e-44
ref|XP_002274093.1| PREDICTED: F-box protein SKIP19 [Vitis vinif...   185   3e-44
sp|Q9S9V9.1|FBL23_ARATH RecName: Full=Putative F-box/LRR-repeat ...   181   4e-43
ref|XP_002874843.1| hypothetical protein ARALYDRAFT_911810 [Arab...   174   7e-41
ref|XP_003593882.1| F-box protein SKIP19 [Medicago truncatula] g...   169   1e-39

>ref|XP_004134625.1| PREDICTED: F-box protein SKIP19-like [Cucumis sativus]
           gi|449490588|ref|XP_004158648.1| PREDICTED: F-box
           protein SKIP19-like [Cucumis sativus]
          Length = 311

 Score =  186 bits (473), Expect = 1e-44
 Identities = 110/257 (42%), Positives = 152/257 (59%), Gaps = 3/257 (1%)
 Frame = +1

Query: 31  KSETSNWLDLPRDVMIIILSKLHTIDILYSVQRVCSSWRKLCKEPQFFCRIV---IPSRW 201
           + E+ NWL+LP DV  +IL KL  ++IL   Q VCSSWRK+C++P  + R++    P  W
Sbjct: 11  EGESRNWLELPVDVTSMILQKLGPVEILTYAQYVCSSWRKICEDPLMW-RVIDMRYPCDW 69

Query: 202 EDCARLGADGLAELVKVAMDRSCGELVEFSLETRKQVVLIDLLFNVVERSNTLKYLRLDT 381
            D        L EL + A+ RSCG+L+ F++E        DLL  + +  N L  LRL  
Sbjct: 70  WDMDY----NLEELCRQAVKRSCGQLIHFNIE---HFGTDDLLLYITQSCNQLSRLRLVY 122

Query: 382 CFTFQSRSLWKQIARKIPLLEELEIHYDSFSVMAIEEVGRSCPNLHYFKLKGELPWYSRG 561
           C       L + ++ K+PLLE+LE+ + SF V  +E +G++CP L   KL  +  +Y R 
Sbjct: 123 CNRISDEGLVEAVS-KLPLLEDLELSFCSFDVETLETLGQNCPGLKSLKLNRQ--FYRRV 179

Query: 562 DCNKMVFAIAESMPQLRRLSLIENGLTNDGLQAILDGCPHLEYLDLRKCLRVNLNFSLLK 741
           +C+K   AIAE+MP LR L +  N LTN GL+AILDGC  LE LDLR C  +NL   L  
Sbjct: 180 ECDKGALAIAENMPNLRHLHIFGNNLTNKGLEAILDGCSALESLDLRHCFNLNLAGQLGA 239

Query: 742 KSSDRIIDVRLPKDAID 792
           K S++I D+RLP D  D
Sbjct: 240 KCSEKIKDLRLPHDPTD 256


>ref|XP_002274093.1| PREDICTED: F-box protein SKIP19 [Vitis vinifera]
           gi|147853333|emb|CAN82327.1| hypothetical protein
           VITISV_041807 [Vitis vinifera]
           gi|297740788|emb|CBI30970.3| unnamed protein product
           [Vitis vinifera]
          Length = 321

 Score =  185 bits (469), Expect = 3e-44
 Identities = 106/256 (41%), Positives = 161/256 (62%)
 Frame = +1

Query: 25  KEKSETSNWLDLPRDVMIIILSKLHTIDILYSVQRVCSSWRKLCKEPQFFCRIVIPSRWE 204
           +E+ E  NW +LPRDV  +ILSKL+ ++IL S Q VCS WRKLC+EP  +  I + +  +
Sbjct: 12  EEEEEERNWQELPRDVTSMILSKLNAVEILSSAQFVCSFWRKLCREPMMWRNIDMHNLGD 71

Query: 205 DCARLGADGLAELVKVAMDRSCGELVEFSLETRKQVVLIDLLFNVVERSNTLKYLRLDTC 384
            C  LG D L E+ + A+DRS G+L+   ++        +LL  +++RS+ +++LRL +C
Sbjct: 72  LCD-LGYD-LEEMARHAVDRSGGQLLSICID---DFATDNLLNYIIDRSSHIRHLRLVSC 126

Query: 385 FTFQSRSLWKQIARKIPLLEELEIHYDSFSVMAIEEVGRSCPNLHYFKLKGELPWYSRGD 564
           +      L + I R +PLL E+++ Y SFS   +E +G+ CP L  F+L  +   +   +
Sbjct: 127 YGISDDGLSEGIKR-LPLLVEIDLCYCSFSKEVLEAIGQCCPRLKSFRLNCQGFRHPHIE 185

Query: 565 CNKMVFAIAESMPQLRRLSLIENGLTNDGLQAILDGCPHLEYLDLRKCLRVNLNFSLLKK 744
           C++   AIA++MP L+ L L  N LTN+GL AILDGC HLE LDLR+C  VNL  +L K+
Sbjct: 186 CDEEALAIAQNMPGLKSLQLFGNKLTNNGLLAILDGCCHLESLDLRQCFNVNLGGNLAKR 245

Query: 745 SSDRIIDVRLPKDAID 792
            +++I  +R P D+ D
Sbjct: 246 CAEQIKILRYPNDSTD 261


>sp|Q9S9V9.1|FBL23_ARATH RecName: Full=Putative F-box/LRR-repeat protein 23
           gi|5732066|gb|AAD48965.1|AF147263_7 contains similarity
           to Medicago truncatula N7 protein (GB:Y17613)
           [Arabidopsis thaliana] gi|7267310|emb|CAB81092.1|
           AT4g05500 [Arabidopsis thaliana]
          Length = 449

 Score =  181 bits (459), Expect = 4e-43
 Identities = 109/258 (42%), Positives = 153/258 (59%), Gaps = 1/258 (0%)
 Frame = +1

Query: 22  MKEKSETSNWLDLPRDVMIIILSKLHTIDILYSVQRVCSSWRKLCKEPQFFCRIVIPSRW 201
           MK+K +  NW +LP  +   IL +L  I+IL + Q+VC  W ++CK+P  + +I I +R 
Sbjct: 173 MKDK-KLRNWAELPSKLTSSILLRLGAIEILQNAQKVCKPWHRVCKDPSMWRKIDIDNR- 230

Query: 202 EDCARLGADGLAELVKVAMDRSCGELVEFSLETRKQVVLIDLLFNVVERSNTLKYLRLDT 381
            D A    D L  + + A+DRS G L+E  +         DL+  + +RS+ LK L L  
Sbjct: 231 NDRAAFKYD-LESMCRHAVDRSHGGLIEIEIW---YYGTNDLIMYIADRSSNLKSLGLVR 286

Query: 382 CFTFQSRSLWKQIARKIPLLEELEIHYDSFSVMAIEEVGRSCPNLHYFKL-KGELPWYSR 558
           CF      + K ++ K+PLLE LE+ Y  FS  ++ ++GRSCPNL   KL +     +S 
Sbjct: 287 CFPITDEGVAKAVS-KVPLLEYLEVSYCLFSGESLRDIGRSCPNLKTLKLNRAPEIMFSN 345

Query: 559 GDCNKMVFAIAESMPQLRRLSLIENGLTNDGLQAILDGCPHLEYLDLRKCLRVNLNFSLL 738
              +    AIAESMP+LR L L+ NGLTN GL AILDGCPHLE+LDLR+C  +NL   L 
Sbjct: 346 SGFDDNAKAIAESMPELRHLQLLGNGLTNKGLNAILDGCPHLEHLDLRQCFNINLVGDLK 405

Query: 739 KKSSDRIIDVRLPKDAID 792
           K+  +RI D+R P D+ D
Sbjct: 406 KRCFERIKDLRCPNDSDD 423



 Score = 77.8 bits (190), Expect = 7e-12
 Identities = 39/68 (57%), Positives = 49/68 (72%)
 Frame = +1

Query: 583 AIAESMPQLRRLSLIENGLTNDGLQAILDGCPHLEYLDLRKCLRVNLNFSLLKKSSDRII 762
           AIAE+MP+LR L L  NGLTN  L+AILD C HL +LDLR+C  +NL   L K+ S+RI 
Sbjct: 24  AIAETMPELRHLKLFGNGLTNLRLEAILDNCVHLVHLDLRRCFNINLLGDLEKRCSERIR 83

Query: 763 DVRLPKDA 786
           D+R P D+
Sbjct: 84  DLRRPDDS 91


>ref|XP_002874843.1| hypothetical protein ARALYDRAFT_911810 [Arabidopsis lyrata subsp.
            lyrata] gi|297320680|gb|EFH51102.1| hypothetical protein
            ARALYDRAFT_911810 [Arabidopsis lyrata subsp. lyrata]
          Length = 610

 Score =  174 bits (440), Expect = 7e-41
 Identities = 108/264 (40%), Positives = 158/264 (59%), Gaps = 4/264 (1%)
 Frame = +1

Query: 16   NTMKEKSETSNWLDLPRDVMIIILSKLHTIDILYSVQRVCSSWRKLCKEPQFFCRIVIPS 195
            +++ +  E  NW +LP ++   IL +L TIDIL + Q+VC SWR++CK+P  + +I +  
Sbjct: 336  SSLVKDEEVRNWAELPPELTSSILGRLGTIDILENAQKVCRSWRRVCKDPSMWRKIDM-- 393

Query: 196  RWEDCARLGADG--LAELVKVAMDRSCGELVEFSLETRKQVVLIDLLFNVVERSNTLKYL 369
              ++   LGA G  L  + + A+DRS G LVE  +         +LL  + +RS+ L+ L
Sbjct: 394  --DNLGDLGAMGYDLEIMCRHAVDRSQGGLVEIDIW---YFGTDELLNYIADRSSNLRTL 448

Query: 370  RLDTCFTFQSRSLWKQIARKIPLLEELEIHYDSFSVMAIEEVGRSCPNLHYFKLKGEL-P 546
            RL  C+        + +  K+PL+E LE+ + S S  +++ VG+SCPNL   KL  E  P
Sbjct: 449  RLIMCYPIADEGFIEAVV-KLPLIEYLELSHCSLSGESLKVVGQSCPNLKTLKLNSEPDP 507

Query: 547  WYSRGDCN-KMVFAIAESMPQLRRLSLIENGLTNDGLQAILDGCPHLEYLDLRKCLRVNL 723
             ++  + N +   AIAESMP+LR L L  N LTN GL AILDGCPHLE+LDLRKC  V+L
Sbjct: 508  KFNDDEFNNEEALAIAESMPELRHLQLFGNILTNVGLNAILDGCPHLEHLDLRKCSNVDL 567

Query: 724  NFSLLKKSSDRIIDVRLPKDAIDG 795
               L K+  +RI D++ P D+  G
Sbjct: 568  TGDLEKRCVERIKDLKRPTDSTAG 591



 Score =  158 bits (399), Expect = 4e-36
 Identities = 99/264 (37%), Positives = 149/264 (56%), Gaps = 10/264 (3%)
 Frame = +1

Query: 28  EKSETSNWLDLPRDVMIIILSKLHTIDILYSVQRVCSSWRKLCKEPQFFCRIVIPSRWE- 204
           E  +  NW +LP ++   IL +L  ++IL + Q+VC SWR++CK+P  + +IVI +    
Sbjct: 2   EDGDYRNWAELPAELTSSILLRLGVVEILENAQKVCRSWRRVCKDPSMWRKIVIDNSGNR 61

Query: 205 DCARLGADGLAELVKVAMDRSCGELVEFSLETRKQVVLIDLL-----FNVVERSNTLKYL 369
           D  +   D +    + A+DRS G L+E  +E      L+D +      ++   S+ L+ L
Sbjct: 62  DIFKYDLDSMC---RHAVDRSQGGLLEIDIEYFGTDKLLDYIADRFSLSLFSISSNLRSL 118

Query: 370 RLDTCFTFQSRSLWKQIARKIPLLEELEIHYDSFSVMAIEEVGRSCPNLHYFKL----KG 537
           RL  C     + + + +  K+PLLE+LE+ Y SFS   +  VG+SCP+L   KL    + 
Sbjct: 119 RLVRCHQITDKGVAEAVV-KLPLLEDLEVSYCSFSGECLSVVGQSCPHLTTLKLNRRPRV 177

Query: 538 ELPWYSRGDCNKMVFAIAESMPQLRRLSLIENGLTNDGLQAILDGCPHLEYLDLRKCLRV 717
           E     R   +    AIAESMP+LR L L+ N LTN GL AILD C HL++LDLR+C  +
Sbjct: 178 EFVINMR---DHNAIAIAESMPELRHLQLLGNALTNTGLNAILDSCTHLDHLDLRQCYNI 234

Query: 718 NLNFSLLKKSSDRIIDVRLPKDAI 789
           NL    +K+  +RI  +R P D+I
Sbjct: 235 NLVEDFMKQCVERIKYLRCPNDSI 258


>ref|XP_003593882.1| F-box protein SKIP19 [Medicago truncatula]
           gi|355482930|gb|AES64133.1| F-box protein SKIP19
           [Medicago truncatula]
          Length = 332

 Score =  169 bits (429), Expect = 1e-39
 Identities = 101/250 (40%), Positives = 150/250 (60%), Gaps = 1/250 (0%)
 Frame = +1

Query: 46  NWLDLPRDVMIIILSKLHTIDILYSVQRVCSSWRKLCKEPQFFCRIVIPSRWEDCARLGA 225
           NWLDLP DV++ I  KLHTID+L+    VC++WRK+ K+P  +  I +P+   D   L +
Sbjct: 24  NWLDLPSDVVLTIFRKLHTIDLLHRAHNVCTTWRKISKDPFLYHTIDMPNIGTD---LSS 80

Query: 226 DGLAELV-KVAMDRSCGELVEFSLETRKQVVLIDLLFNVVERSNTLKYLRLDTCFTFQSR 402
           D   E++ + A+D S G+  + ++E        DLL ++ + +N L+ LRL  C+     
Sbjct: 81  DFYLEILCQRAVDYSSGQATDINIE---YFGTDDLLRHIADSANHLQRLRLLGCYNVTDE 137

Query: 403 SLWKQIARKIPLLEELEIHYDSFSVMAIEEVGRSCPNLHYFKLKGELPWYSRGDCNKMVF 582
            L  ++A K+  LEEL+I   S S   +E +GR CP L  FK   E     R + +   F
Sbjct: 138 GLC-EVAGKLSHLEELDITIHSLSNDPLEAIGRCCPQLKTFKFNIEGFRRPRMEFDDEAF 196

Query: 583 AIAESMPQLRRLSLIENGLTNDGLQAILDGCPHLEYLDLRKCLRVNLNFSLLKKSSDRII 762
           +IA++MP LR L L+ N ++ DGL+AILDGCPHLE LD+R+C  ++L  SL K+  ++I 
Sbjct: 197 SIAKTMPGLRHLMLVGNKMSKDGLRAILDGCPHLESLDIRQCFNLSLRGSLGKRCREQIK 256

Query: 763 DVRLPKDAID 792
            +RLP DA D
Sbjct: 257 YLRLPYDATD 266