BLASTX nr result

ID: Coptis24_contig00008589 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00008589
         (1829 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320851.1| predicted protein [Populus trichocarpa] gi|2...   603   e-170
ref|XP_002273414.1| PREDICTED: mitochondrial substrate carrier f...   603   e-170
ref|XP_002509930.1| Grave disease carrier protein, putative [Ric...   601   e-169
ref|XP_004133837.1| PREDICTED: mitochondrial substrate carrier f...   598   e-168
ref|XP_002532663.1| Grave disease carrier protein, putative [Ric...   597   e-168

>ref|XP_002320851.1| predicted protein [Populus trichocarpa] gi|222861624|gb|EEE99166.1|
            predicted protein [Populus trichocarpa]
          Length = 354

 Score =  603 bits (1556), Expect = e-170
 Identities = 306/355 (86%), Positives = 325/355 (91%), Gaps = 4/355 (1%)
 Frame = +3

Query: 417  MASED----ESAVSKIVVNLAEEAKLAREGVKAPGHAIFSICKSLVAGGVAGGLSRTAVA 584
            MASED    ESAV+ IV NLAEEAKLAREGVKAP HAI SICKSLVAGGVAGG+SRTAVA
Sbjct: 1    MASEDVKTSESAVTTIV-NLAEEAKLAREGVKAPSHAILSICKSLVAGGVAGGVSRTAVA 59

Query: 585  PLERLKILLQVQNPHSIKYNGTVQGLKYIWRSEGFRGLFKGNGTNCARIVPNSAVKFFSY 764
            PLERLKILLQVQNPH+IKYNGT+QGLKYIWR+EGFRGLFKGNGTNCARIVPNSAVKFFSY
Sbjct: 60   PLERLKILLQVQNPHNIKYNGTIQGLKYIWRTEGFRGLFKGNGTNCARIVPNSAVKFFSY 119

Query: 765  EEASRGILWLYRQQPGNEDASLTPLLRLGAGACAGIIAMSATYPMDMVRGRLTVQTEKSP 944
            E+ASRGIL LY+QQ GNEDA LTPLLRLGAGACAGIIAMSATYPMDMVRGRLTVQT+KSP
Sbjct: 120  EQASRGILSLYQQQTGNEDAQLTPLLRLGAGACAGIIAMSATYPMDMVRGRLTVQTDKSP 179

Query: 945  YQYRGMFHALSTVLREEGPRALYKGWLPSVIGVVPYVGLNFAVYESLKDWLIKSRPFGLV 1124
            YQYRGMFHALSTVLR+EGPRALYKGWLPSVIGVVPYVGLNFAVYESLKDWL+K+RPFGLV
Sbjct: 180  YQYRGMFHALSTVLRQEGPRALYKGWLPSVIGVVPYVGLNFAVYESLKDWLVKARPFGLV 239

Query: 1125 QDTELSVPTRLXXXXXXXXXXXXXXYPLDVIRRRMQMVGWNNASSVLTGDGRSKAPLEYT 1304
            +D+ELSV TRL              YPLDVIRRRMQMVGW +A+S++TGDGRSKAPLEY 
Sbjct: 240  EDSELSVTTRLACGAAAGTIGQTVAYPLDVIRRRMQMVGWKDAASIVTGDGRSKAPLEYN 299

Query: 1305 GMIDAFRKTVRHEGFGALYKGLVPNSVKVVPSIAIAFVTYETVKDILGVEMRISD 1469
            GMID FRKTVRHEGFGALYKGLVPNSVKVVPSIAIAFVTYE VKD+LGVE+RISD
Sbjct: 300  GMIDTFRKTVRHEGFGALYKGLVPNSVKVVPSIAIAFVTYEMVKDVLGVEIRISD 354


>ref|XP_002273414.1| PREDICTED: mitochondrial substrate carrier family protein B [Vitis
            vinifera] gi|297742308|emb|CBI34457.3| unnamed protein
            product [Vitis vinifera]
          Length = 354

 Score =  603 bits (1556), Expect = e-170
 Identities = 303/355 (85%), Positives = 326/355 (91%), Gaps = 4/355 (1%)
 Frame = +3

Query: 417  MASED----ESAVSKIVVNLAEEAKLAREGVKAPGHAIFSICKSLVAGGVAGGLSRTAVA 584
            MASED    E+AVS+IV NLAEEAKLAREGVKAP HA+ S+CKSLVAGGVAGG+SRTAVA
Sbjct: 1    MASEDVKTSEAAVSRIV-NLAEEAKLAREGVKAPSHALLSVCKSLVAGGVAGGVSRTAVA 59

Query: 585  PLERLKILLQVQNPHSIKYNGTVQGLKYIWRSEGFRGLFKGNGTNCARIVPNSAVKFFSY 764
            PLERLKILLQVQNPH+IKYNGT+QGLKYIW+SEGFRGLFKGNGTNCARIVPNSAVKF+SY
Sbjct: 60   PLERLKILLQVQNPHTIKYNGTIQGLKYIWKSEGFRGLFKGNGTNCARIVPNSAVKFYSY 119

Query: 765  EEASRGILWLYRQQPGNEDASLTPLLRLGAGACAGIIAMSATYPMDMVRGRLTVQTEKSP 944
            E+AS+GILWLYRQQPGNE+A LTPLLRLGAGACAGIIAMSATYPMDMVRGRLTVQTEKSP
Sbjct: 120  EQASKGILWLYRQQPGNENAELTPLLRLGAGACAGIIAMSATYPMDMVRGRLTVQTEKSP 179

Query: 945  YQYRGMFHALSTVLREEGPRALYKGWLPSVIGVVPYVGLNFAVYESLKDWLIKSRPFGLV 1124
             QYRG+FHALSTVLREEG RALYKGWLPSVIGV+PYVGLNFAVYESLKDWL+K++PFGLV
Sbjct: 180  RQYRGIFHALSTVLREEGARALYKGWLPSVIGVIPYVGLNFAVYESLKDWLMKAKPFGLV 239

Query: 1125 QDTELSVPTRLXXXXXXXXXXXXXXYPLDVIRRRMQMVGWNNASSVLTGDGRSKAPLEYT 1304
            +D+EL V TRL              YPLDVIRRRMQMVGW +A+SV+TGDGR KAPLEYT
Sbjct: 240  EDSELGVTTRLACGAAAGTVGQTVAYPLDVIRRRMQMVGWKDAASVVTGDGRGKAPLEYT 299

Query: 1305 GMIDAFRKTVRHEGFGALYKGLVPNSVKVVPSIAIAFVTYETVKDILGVEMRISD 1469
            GM+DAFRKTVRHEGFGALYKGLVPNSVKVVPSIAIAFVTYE VKDILGVEMRISD
Sbjct: 300  GMVDAFRKTVRHEGFGALYKGLVPNSVKVVPSIAIAFVTYEMVKDILGVEMRISD 354


>ref|XP_002509930.1| Grave disease carrier protein, putative [Ricinus communis]
            gi|223549829|gb|EEF51317.1| Grave disease carrier
            protein, putative [Ricinus communis]
          Length = 355

 Score =  601 bits (1550), Expect = e-169
 Identities = 301/356 (84%), Positives = 325/356 (91%), Gaps = 5/356 (1%)
 Frame = +3

Query: 417  MASED-----ESAVSKIVVNLAEEAKLAREGVKAPGHAIFSICKSLVAGGVAGGLSRTAV 581
            MASED     E+AVSKIV NLAEEAKLARE +KAP HA+FSICKSL+AGGVAGG+SRTAV
Sbjct: 1    MASEDVKTRSEAAVSKIV-NLAEEAKLAREEIKAPSHALFSICKSLIAGGVAGGVSRTAV 59

Query: 582  APLERLKILLQVQNPHSIKYNGTVQGLKYIWRSEGFRGLFKGNGTNCARIVPNSAVKFFS 761
            APLERLKILLQVQNPHSIKYNGT+QGLKYIWR+EGFRGLFKGNGTNCARIVPNSAVKFFS
Sbjct: 60   APLERLKILLQVQNPHSIKYNGTIQGLKYIWRTEGFRGLFKGNGTNCARIVPNSAVKFFS 119

Query: 762  YEEASRGILWLYRQQPGNEDASLTPLLRLGAGACAGIIAMSATYPMDMVRGRLTVQTEKS 941
            YEEAS+GILW+YRQQ GN+DA LTPLLRLGAGACAGIIAMSATYPMDMVRGRLTVQTE S
Sbjct: 120  YEEASKGILWMYRQQTGNDDAQLTPLLRLGAGACAGIIAMSATYPMDMVRGRLTVQTEAS 179

Query: 942  PYQYRGMFHALSTVLREEGPRALYKGWLPSVIGVVPYVGLNFAVYESLKDWLIKSRPFGL 1121
            P QY+G+FHALSTVL+EEGPRALY+GWLPSVIGVVPYVGLNFAVYESLKDWL+KS+PFGL
Sbjct: 180  PRQYKGIFHALSTVLKEEGPRALYRGWLPSVIGVVPYVGLNFAVYESLKDWLLKSKPFGL 239

Query: 1122 VQDTELSVPTRLXXXXXXXXXXXXXXYPLDVIRRRMQMVGWNNASSVLTGDGRSKAPLEY 1301
            VQD EL V TRL              YPLDVIRRRMQMVGW +A+SV+TGDG++KAPLEY
Sbjct: 240  VQDNELGVATRLACGAAAGTVGQTVAYPLDVIRRRMQMVGWKDAASVITGDGKTKAPLEY 299

Query: 1302 TGMIDAFRKTVRHEGFGALYKGLVPNSVKVVPSIAIAFVTYETVKDILGVEMRISD 1469
            TGM+DAFRKTVRHEGFGALYKGLVPNSVKVVPSIAIAFVTYE VKD+LGVE+RISD
Sbjct: 300  TGMVDAFRKTVRHEGFGALYKGLVPNSVKVVPSIAIAFVTYELVKDVLGVEVRISD 355


>ref|XP_004133837.1| PREDICTED: mitochondrial substrate carrier family protein B-like
            [Cucumis sativus] gi|449480266|ref|XP_004155845.1|
            PREDICTED: mitochondrial substrate carrier family protein
            B-like [Cucumis sativus]
          Length = 354

 Score =  598 bits (1542), Expect = e-168
 Identities = 304/355 (85%), Positives = 325/355 (91%), Gaps = 4/355 (1%)
 Frame = +3

Query: 417  MASED----ESAVSKIVVNLAEEAKLAREGVKAPGHAIFSICKSLVAGGVAGGLSRTAVA 584
            MASED    ESAVS IV NLAEEAKLAREGVKAP +A+ SICKSLVAGGVAGG+SRTAVA
Sbjct: 1    MASEDVKRSESAVSTIV-NLAEEAKLAREGVKAPSYAVLSICKSLVAGGVAGGVSRTAVA 59

Query: 585  PLERLKILLQVQNPHSIKYNGTVQGLKYIWRSEGFRGLFKGNGTNCARIVPNSAVKFFSY 764
            PLERLKILLQVQNPHSIKYNGT+QGLKYIWR+EGFRGLFKGNGTNCARIVPNSAVKFFSY
Sbjct: 60   PLERLKILLQVQNPHSIKYNGTIQGLKYIWRTEGFRGLFKGNGTNCARIVPNSAVKFFSY 119

Query: 765  EEASRGILWLYRQQPGNEDASLTPLLRLGAGACAGIIAMSATYPMDMVRGRLTVQTEKSP 944
            E+ASRGIL+ YR+Q G++DA LTPLLRLGAGACAGIIAMSATYPMDMVRGRLTVQT+KSP
Sbjct: 120  EQASRGILYFYREQTGDQDAQLTPLLRLGAGACAGIIAMSATYPMDMVRGRLTVQTDKSP 179

Query: 945  YQYRGMFHALSTVLREEGPRALYKGWLPSVIGVVPYVGLNFAVYESLKDWLIKSRPFGLV 1124
            YQYRG+FHALSTVLREEGPRALYKGWLPSVIGVVPYVGLNFAVYESLKDWLIK++PFGLV
Sbjct: 180  YQYRGIFHALSTVLREEGPRALYKGWLPSVIGVVPYVGLNFAVYESLKDWLIKNKPFGLV 239

Query: 1125 QDTELSVPTRLXXXXXXXXXXXXXXYPLDVIRRRMQMVGWNNASSVLTGDGRSKAPLEYT 1304
             D+ELSV TRL              YPLDVIRRRMQMVGWNNA+SV+TGDGRSKA LEYT
Sbjct: 240  DDSELSVTTRLACGAAAGTVGQTVAYPLDVIRRRMQMVGWNNAASVVTGDGRSKASLEYT 299

Query: 1305 GMIDAFRKTVRHEGFGALYKGLVPNSVKVVPSIAIAFVTYETVKDILGVEMRISD 1469
            GM+DAFRKTVR+EGF ALYKGLVPNSVKVVPSIAIAFVTYE VKD+LGVE+RISD
Sbjct: 300  GMVDAFRKTVRYEGFRALYKGLVPNSVKVVPSIAIAFVTYEMVKDVLGVEIRISD 354


>ref|XP_002532663.1| Grave disease carrier protein, putative [Ricinus communis]
            gi|223527623|gb|EEF29736.1| Grave disease carrier
            protein, putative [Ricinus communis]
          Length = 354

 Score =  597 bits (1539), Expect = e-168
 Identities = 302/355 (85%), Positives = 326/355 (91%), Gaps = 4/355 (1%)
 Frame = +3

Query: 417  MASED----ESAVSKIVVNLAEEAKLAREGVKAPGHAIFSICKSLVAGGVAGGLSRTAVA 584
            MASED    ESAV+ IV NLAEEAKLAREGVKAP +A+ SICKSLVAGGVAGG+SRTAVA
Sbjct: 1    MASEDVKTTESAVTTIV-NLAEEAKLAREGVKAPSYAVLSICKSLVAGGVAGGVSRTAVA 59

Query: 585  PLERLKILLQVQNPHSIKYNGTVQGLKYIWRSEGFRGLFKGNGTNCARIVPNSAVKFFSY 764
            PLERLKILLQVQNPH+IKYNGT+QGL+YIW++EGFRGLFKGNGTNCARIVPNSAVKFFSY
Sbjct: 60   PLERLKILLQVQNPHNIKYNGTIQGLRYIWKTEGFRGLFKGNGTNCARIVPNSAVKFFSY 119

Query: 765  EEASRGILWLYRQQPGNEDASLTPLLRLGAGACAGIIAMSATYPMDMVRGRLTVQTEKSP 944
            EEAS+GIL+LYRQQ GNEDA LTPLLRLGAGACAGIIAMSATYPMDMVRGRLTVQT+KSP
Sbjct: 120  EEASKGILYLYRQQTGNEDAQLTPLLRLGAGACAGIIAMSATYPMDMVRGRLTVQTDKSP 179

Query: 945  YQYRGMFHALSTVLREEGPRALYKGWLPSVIGVVPYVGLNFAVYESLKDWLIKSRPFGLV 1124
            YQYRGMFHALSTVLREEGPRALYKGWLPSVIGV+PYVGLNFAVYESLK+WLIK++PFGLV
Sbjct: 180  YQYRGMFHALSTVLREEGPRALYKGWLPSVIGVIPYVGLNFAVYESLKEWLIKAKPFGLV 239

Query: 1125 QDTELSVPTRLXXXXXXXXXXXXXXYPLDVIRRRMQMVGWNNASSVLTGDGRSKAPLEYT 1304
            QD++LSV TRL              YPLDVIRRRMQMVGW +ASS++ GDGRSK+ LEYT
Sbjct: 240  QDSDLSVTTRLACGAAAGTVGQTVAYPLDVIRRRMQMVGWKDASSIVIGDGRSKSSLEYT 299

Query: 1305 GMIDAFRKTVRHEGFGALYKGLVPNSVKVVPSIAIAFVTYETVKDILGVEMRISD 1469
            GMIDAFRKTVR+EGFGALYKGLVPNSVKVVPSIAIAFVTYE VKDILGVE+RISD
Sbjct: 300  GMIDAFRKTVRYEGFGALYKGLVPNSVKVVPSIAIAFVTYEVVKDILGVEIRISD 354


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