BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00008447
         (868 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326383.1| predicted protein [Populus trichocarpa] gi|2...   330   3e-88
ref|XP_002267276.1| PREDICTED: ras-related protein RABC2a [Vitis...   328   7e-88
ref|XP_002322909.1| predicted protein [Populus trichocarpa] gi|2...   327   2e-87
ref|NP_568121.1| RAB GTPase-C2A [Arabidopsis thaliana] gi|297810...   322   5e-86
ref|XP_003521418.1| PREDICTED: ras-related protein RABC2a-like [...   317   2e-84

>ref|XP_002326383.1| predicted protein [Populus trichocarpa] gi|222833576|gb|EEE72053.1|
           predicted protein [Populus trichocarpa]
          Length = 213

 Score =  330 bits (845), Expect = 3e-88
 Identities = 163/201 (81%), Positives = 184/201 (91%), Gaps = 2/201 (0%)
 Frame = -2

Query: 768 DYSFKILLIGDSGVGKSSLLVTFISNSVQHLSPTIGVDFKIKQLIVGGKRLKLTIWDTAG 589
           D SFKILLIGDSGVGKSSLLV+FIS+SV+ ++PTIGVDFKIKQL VGGKRLKLTIWDTAG
Sbjct: 13  DLSFKILLIGDSGVGKSSLLVSFISSSVEDIAPTIGVDFKIKQLTVGGKRLKLTIWDTAG 72

Query: 588 QERFRTVTSSYYRAAQGIILVYDVTRRESFTNLADVWAKEVELYSTNQDCIKMLVGNKVD 409
           QERFRT+TSSYYR AQGIILVYDVTRRE+FTNL+DVW KEV+LYSTNQDC+KMLVGNKVD
Sbjct: 73  QERFRTLTSSYYRNAQGIILVYDVTRRETFTNLSDVWTKEVDLYSTNQDCVKMLVGNKVD 132

Query: 408 RDIEREVTREEGIALAQEHKCIFIECSAKTQQNVQQCFEELALKILEVPSLLEEGSTVVK 229
           +D ER+VTR+EG++LA+EH C F+ECSAKT+QNV+QCFEELALKI+EVPSL+EEGST VK
Sbjct: 133 KDSERDVTRDEGMSLAKEHGCTFLECSAKTRQNVEQCFEELALKIMEVPSLMEEGSTAVK 192

Query: 228 RNSLKQKQVHKAPS--GGCCS 172
           RN LKQK     PS  GGCCS
Sbjct: 193 RNILKQKPDQHPPSSGGGCCS 213


>ref|XP_002267276.1| PREDICTED: ras-related protein RABC2a [Vitis vinifera]
           gi|297739985|emb|CBI30167.3| unnamed protein product
           [Vitis vinifera]
          Length = 211

 Score =  328 bits (842), Expect = 7e-88
 Identities = 165/200 (82%), Positives = 184/200 (92%), Gaps = 1/200 (0%)
 Frame = -2

Query: 768 DYSFKILLIGDSGVGKSSLLVTFISNSVQHLSPTIGVDFKIKQLIVGGKRLKLTIWDTAG 589
           D SFKILLIGDS VGKSSLLV+FIS+SV+ L+PTIGVDFKIKQL VGGKRLKLTIWDTAG
Sbjct: 12  DLSFKILLIGDSAVGKSSLLVSFISSSVEDLAPTIGVDFKIKQLTVGGKRLKLTIWDTAG 71

Query: 588 QERFRTVTSSYYRAAQGIILVYDVTRRESFTNLADVWAKEVELYSTNQDCIKMLVGNKVD 409
           QERFRT+TSSYYR AQGIILVYDVTRRESFTNL+DVWAKEVELYSTNQDC+KMLVGNKVD
Sbjct: 72  QERFRTLTSSYYRGAQGIILVYDVTRRESFTNLSDVWAKEVELYSTNQDCVKMLVGNKVD 131

Query: 408 RDIEREVTREEGIALAQEHKCIFIECSAKTQQNVQQCFEELALKILEVPSLLEEGSTVVK 229
           R+ ER V+REEGIALA+EH C+F ECSAKT++NV++CFEELALKI+EVPSLLEEGSTV K
Sbjct: 132 RESERVVSREEGIALAKEHGCLFFECSAKTRENVEKCFEELALKIMEVPSLLEEGSTVGK 191

Query: 228 RNSLKQKQVHK-APSGGCCS 172
           RN LK K  ++  P+GGCCS
Sbjct: 192 RNILKPKPENQPPPTGGCCS 211


>ref|XP_002322909.1| predicted protein [Populus trichocarpa] gi|222867539|gb|EEF04670.1|
           predicted protein [Populus trichocarpa]
          Length = 208

 Score =  327 bits (839), Expect = 2e-87
 Identities = 161/200 (80%), Positives = 186/200 (93%), Gaps = 1/200 (0%)
 Frame = -2

Query: 768 DYSFKILLIGDSGVGKSSLLVTFISNSVQHLSPTIGVDFKIKQLIVGGKRLKLTIWDTAG 589
           D SFKILLIGDSGVGKSSLLV+FIS+SV+ L+PTIGVDFKIKQL VGGKRLKLTIWDTAG
Sbjct: 9   DLSFKILLIGDSGVGKSSLLVSFISSSVEDLAPTIGVDFKIKQLTVGGKRLKLTIWDTAG 68

Query: 588 QERFRTVTSSYYRAAQGIILVYDVTRRESFTNLADVWAKEVELYSTNQDCIKMLVGNKVD 409
           QERFRT+TSSYYR AQGIILVYDVTRRE+FTNL+DVW KEVEL+STNQDC+KMLVGNKVD
Sbjct: 69  QERFRTLTSSYYRNAQGIILVYDVTRRETFTNLSDVWGKEVELFSTNQDCVKMLVGNKVD 128

Query: 408 RDIEREVTREEGIALAQEHKCIFIECSAKTQQNVQQCFEELALKILEVPSLLEEGSTVVK 229
           ++  R+VT++EG+ALA++H C+F+ECSAKT++NV+QCFEELALKI+EVPSLLEEGST VK
Sbjct: 129 KESGRDVTKDEGMALAKQHGCLFLECSAKTRENVEQCFEELALKIMEVPSLLEEGSTAVK 188

Query: 228 RNSLKQK-QVHKAPSGGCCS 172
           RN LKQK + H A +GGCCS
Sbjct: 189 RNILKQKPEHHVASNGGCCS 208


>ref|NP_568121.1| RAB GTPase-C2A [Arabidopsis thaliana]
           gi|297810433|ref|XP_002873100.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
           gi|75098916|sp|O49841.1|RAC2A_ARATH RecName:
           Full=Ras-related protein RABC2a; Short=AtRABC2a;
           AltName: Full=Ras-related protein Rab18B; Short=AtRab18B
           gi|2723477|dbj|BAA24074.1| GTP-binding protein
           [Arabidopsis thaliana] gi|7378638|emb|CAB83314.1| AtRab
           GTP-binding protein [Arabidopsis thaliana]
           gi|26453054|dbj|BAC43603.1| putative AtRab GTP-binding
           protein [Arabidopsis thaliana]
           gi|29824251|gb|AAP04086.1| unknown protein [Arabidopsis
           thaliana] gi|297318937|gb|EFH49359.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
           gi|332003236|gb|AED90619.1| RAB GTPase-C2A [Arabidopsis
           thaliana]
          Length = 210

 Score =  322 bits (826), Expect = 5e-86
 Identities = 160/200 (80%), Positives = 181/200 (90%), Gaps = 1/200 (0%)
 Frame = -2

Query: 768 DYSFKILLIGDSGVGKSSLLVTFISNSVQHLSPTIGVDFKIKQLIVGGKRLKLTIWDTAG 589
           D SFKILLIGDSGVGKSSLLV+FIS+SV+ L+PTIGVDFKIKQL VGGKRLKLTIWDTAG
Sbjct: 11  DLSFKILLIGDSGVGKSSLLVSFISSSVEDLAPTIGVDFKIKQLTVGGKRLKLTIWDTAG 70

Query: 588 QERFRTVTSSYYRAAQGIILVYDVTRRESFTNLADVWAKEVELYSTNQDCIKMLVGNKVD 409
           QERFRT+TSSYYR AQGIILVYDVTRRE+FTNL DVW KE+ELYSTNQ+C++MLVGNKVD
Sbjct: 71  QERFRTLTSSYYRGAQGIILVYDVTRRETFTNLVDVWGKEIELYSTNQECVRMLVGNKVD 130

Query: 408 RDIEREVTREEGIALAQEHKCIFIECSAKTQQNVQQCFEELALKILEVPSLLEEGSTVVK 229
           R+ ER V+REEGIALA+E  C+F+ECSA+T+QNV+QCFEELALKI+EVPSLLEEGS+ VK
Sbjct: 131 RESERGVSREEGIALAKELNCMFLECSARTRQNVEQCFEELALKIMEVPSLLEEGSSAVK 190

Query: 228 RNSLKQKQVHKA-PSGGCCS 172
           RN LKQK  H+     GCCS
Sbjct: 191 RNILKQKPEHQTNTQSGCCS 210


>ref|XP_003521418.1| PREDICTED: ras-related protein RABC2a-like [Glycine max]
          Length = 211

 Score =  317 bits (813), Expect = 2e-84
 Identities = 159/200 (79%), Positives = 181/200 (90%), Gaps = 1/200 (0%)
 Frame = -2

Query: 768 DYSFKILLIGDSGVGKSSLLVTFISNSVQHLSPTIGVDFKIKQLIVGGKRLKLTIWDTAG 589
           D SFKILLIGDSGVGKSSLLV+FIS+SV+ LSPTIGVDFKIK L VGGKRLKLTIWDTAG
Sbjct: 12  DLSFKILLIGDSGVGKSSLLVSFISSSVEDLSPTIGVDFKIKTLTVGGKRLKLTIWDTAG 71

Query: 588 QERFRTVTSSYYRAAQGIILVYDVTRRESFTNLADVWAKEVELYSTNQDCIKMLVGNKVD 409
           QERFRT+ SSYYR AQGIILVYDVTRRE+FTNL++VW+KEVELYSTNQDC+K+LVGNKVD
Sbjct: 72  QERFRTLNSSYYRKAQGIILVYDVTRRETFTNLSEVWSKEVELYSTNQDCVKILVGNKVD 131

Query: 408 RDIEREVTREEGIALAQEHKCIFIECSAKTQQNVQQCFEELALKILEVPSLLEEGSTVVK 229
           RD ER V+REEG+ALA+E  C+ +ECSAKT++NV+QCFEELALKI+E PSLLEEGST VK
Sbjct: 132 RDTERAVSREEGLALAKELGCLLLECSAKTRENVEQCFEELALKIMEAPSLLEEGSTAVK 191

Query: 228 RNSLKQKQVHKA-PSGGCCS 172
           R+ LK KQ  +A  +GGCCS
Sbjct: 192 RSVLKPKQESQASQNGGCCS 211