BLASTX nr result

ID: Coptis24_contig00008381 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00008381
         (1237 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273557.1| PREDICTED: MOSC domain-containing protein 1,...   468   e-129
ref|XP_002304601.1| predicted protein [Populus trichocarpa] gi|2...   458   e-126
gb|ABK95960.1| unknown [Populus trichocarpa]                          451   e-124
ref|XP_002528139.1| molybdopterin cofactor sulfurase, putative [...   446   e-123
ref|XP_002460665.1| hypothetical protein SORBIDRAFT_02g032800 [S...   433   e-119

>ref|XP_002273557.1| PREDICTED: MOSC domain-containing protein 1, mitochondrial [Vitis
            vinifera] gi|297738033|emb|CBI27234.3| unnamed protein
            product [Vitis vinifera]
          Length = 311

 Score =  468 bits (1205), Expect = e-129
 Identities = 227/320 (70%), Positives = 258/320 (80%)
 Frame = +1

Query: 109  EKASAMVSSIFGGXXXXXXXXXXXXXXXYPIKSCRGISVPQASITPTGLRWDRQWLVVNS 288
            E+ +A +SSIF                 YPIKSCRGISV QA I+PTG +WDRQWLVVNS
Sbjct: 8    EEPTAKISSIF----------------IYPIKSCRGISVSQAPISPTGFQWDRQWLVVNS 51

Query: 289  KGRAYTQRIEPKLALVQVELPSEAFHEDWEPTSESYLVLKAPGMDILKVSLSKTCEKIEG 468
            KGRAYTQR+EPKLALV+VELP +AF E WEPT  SYLV++APGMD LKV L K C K +G
Sbjct: 52   KGRAYTQRVEPKLALVEVELPKDAFTEGWEPTKSSYLVVRAPGMDALKVCLGKQCAKADG 111

Query: 469  VSVWEWSGSALDEGAEASEWFSNYLGKPSRLVHFNTATEARAVDPDFAPGYRTMFSDGYP 648
            VSVWEWSGSALDEG EA++WFS YLGKPSRLV FN A+E RAVDP FAPG++ MFSD YP
Sbjct: 112  VSVWEWSGSALDEGDEAAQWFSTYLGKPSRLVRFNAASETRAVDPKFAPGFKIMFSDEYP 171

Query: 649  FMLLSQGSLDALNKLLKEPVPVNRFRPNILVDGCESFDEDLWTEIKINKFAFSGVKLCAR 828
            F+L+SQGSLDALN+LLKE VP+NRFRPNILVDGCE F EDLW +++IN F F GVKLC+R
Sbjct: 172  FLLISQGSLDALNELLKESVPINRFRPNILVDGCEPFSEDLWKDLRINGFKFQGVKLCSR 231

Query: 829  CKVPTINQDNGIAGQEPTETLVNFRSDKVLRPTRKQQGKVYFGQNLVCKESLRDGKGKVI 1008
            CKVPTINQ+NGIAG EP+ TL  FRSDKVLRP +KQQGKVYFGQNLVCK+SL  GKGK I
Sbjct: 232  CKVPTINQENGIAGSEPSVTLKEFRSDKVLRPNKKQQGKVYFGQNLVCKDSLTQGKGKAI 291

Query: 1009 KVGDPIYVLKKVSTRVDAAA 1068
             VGD +YVL K S+  +AAA
Sbjct: 292  SVGDCVYVLSKASSPAEAAA 311


>ref|XP_002304601.1| predicted protein [Populus trichocarpa] gi|222842033|gb|EEE79580.1|
            predicted protein [Populus trichocarpa]
          Length = 304

 Score =  458 bits (1179), Expect = e-126
 Identities = 216/319 (67%), Positives = 261/319 (81%)
 Frame = +1

Query: 112  KASAMVSSIFGGXXXXXXXXXXXXXXXYPIKSCRGISVPQASITPTGLRWDRQWLVVNSK 291
            +A+A VSSIF                 YP+KSCRGIS+ QA +TPTG RWDR WLVVN +
Sbjct: 2    EATAKVSSIF----------------IYPVKSCRGISLSQAPLTPTGFRWDRNWLVVNYR 45

Query: 292  GRAYTQRIEPKLALVQVELPSEAFHEDWEPTSESYLVLKAPGMDILKVSLSKTCEKIEGV 471
            GRAYTQR+EPKLALV++ELP EAF E WEPT  S++ +KAPGM +LK+SL K  E  EGV
Sbjct: 46   GRAYTQRVEPKLALVEIELPDEAFSEGWEPTKNSFMKIKAPGMSVLKISLMKPSEVAEGV 105

Query: 472  SVWEWSGSALDEGAEASEWFSNYLGKPSRLVHFNTATEARAVDPDFAPGYRTMFSDGYPF 651
            SVWEWSGSALDEGAEA++WFS+YLGKPS+LV FN A+E R +DP++APG++TMFSD +PF
Sbjct: 106  SVWEWSGSALDEGAEAAKWFSDYLGKPSQLVRFNAASETRLIDPNYAPGHKTMFSDLFPF 165

Query: 652  MLLSQGSLDALNKLLKEPVPVNRFRPNILVDGCESFDEDLWTEIKINKFAFSGVKLCARC 831
            ML+SQGSLDALN+LL+EPVP+NRFRPNILV+GCE F EDLWTEI+I++F F GVKLC+RC
Sbjct: 166  MLISQGSLDALNQLLREPVPINRFRPNILVEGCEPFSEDLWTEIRISRFTFEGVKLCSRC 225

Query: 832  KVPTINQDNGIAGQEPTETLVNFRSDKVLRPTRKQQGKVYFGQNLVCKESLRDGKGKVIK 1011
            KVPTINQD GI G EP ETL+  RSDKVLRP +KQQGK+YFGQNLV KE+  +G GK++ 
Sbjct: 226  KVPTINQDTGIGGTEPNETLMKIRSDKVLRPDKKQQGKIYFGQNLVWKENPSEGHGKIVN 285

Query: 1012 VGDPIYVLKKVSTRVDAAA 1068
            VGDP++VLKKVS+  +AAA
Sbjct: 286  VGDPVFVLKKVSSVAEAAA 304


>gb|ABK95960.1| unknown [Populus trichocarpa]
          Length = 325

 Score =  451 bits (1160), Expect = e-124
 Identities = 212/313 (67%), Positives = 255/313 (81%)
 Frame = +1

Query: 112  KASAMVSSIFGGXXXXXXXXXXXXXXXYPIKSCRGISVPQASITPTGLRWDRQWLVVNSK 291
            +A+A VSSIF                 YP+KSCRGIS+ QA +TPTG RWDR WLVVN +
Sbjct: 2    EATAKVSSIF----------------IYPVKSCRGISLSQAPLTPTGFRWDRNWLVVNYR 45

Query: 292  GRAYTQRIEPKLALVQVELPSEAFHEDWEPTSESYLVLKAPGMDILKVSLSKTCEKIEGV 471
            GRAYTQR+EPKLALV++ELP EAF E WEPT  S++ +KAPGM +LK+SL K  E  EGV
Sbjct: 46   GRAYTQRVEPKLALVEIELPDEAFSEGWEPTKNSFMKIKAPGMSVLKISLMKPSEVAEGV 105

Query: 472  SVWEWSGSALDEGAEASEWFSNYLGKPSRLVHFNTATEARAVDPDFAPGYRTMFSDGYPF 651
            SVWEWSGSALDEGAEA++WFS+YLGKPS+LV FN A+E R +DP++APG++TMFSD +PF
Sbjct: 106  SVWEWSGSALDEGAEAAKWFSDYLGKPSQLVRFNAASETRLIDPNYAPGHKTMFSDLFPF 165

Query: 652  MLLSQGSLDALNKLLKEPVPVNRFRPNILVDGCESFDEDLWTEIKINKFAFSGVKLCARC 831
            ML+SQGSLDALN+LL+EPVP+NRFRPNILV+GCE F EDLWTEI+I++F F GVKLC+RC
Sbjct: 166  MLISQGSLDALNQLLREPVPINRFRPNILVEGCEPFSEDLWTEIRISRFTFEGVKLCSRC 225

Query: 832  KVPTINQDNGIAGQEPTETLVNFRSDKVLRPTRKQQGKVYFGQNLVCKESLRDGKGKVIK 1011
            KVPTINQD GI G EP ETL+  RSDKVLRP +KQQGK+YFGQNLV KE+  +G GK++ 
Sbjct: 226  KVPTINQDTGIGGTEPNETLMKIRSDKVLRPDKKQQGKIYFGQNLVWKENPSEGHGKIVN 285

Query: 1012 VGDPIYVLKKVST 1050
            VGDP++VLKK  T
Sbjct: 286  VGDPVFVLKKRMT 298


>ref|XP_002528139.1| molybdopterin cofactor sulfurase, putative [Ricinus communis]
            gi|223532437|gb|EEF34230.1| molybdopterin cofactor
            sulfurase, putative [Ricinus communis]
          Length = 304

 Score =  446 bits (1147), Expect = e-123
 Identities = 206/292 (70%), Positives = 247/292 (84%)
 Frame = +1

Query: 193  YPIKSCRGISVPQASITPTGLRWDRQWLVVNSKGRAYTQRIEPKLALVQVELPSEAFHED 372
            YPIKSCRGISV QAS+ PTG RWDR WLVVNSKGRAYTQR+EPKLALV+VELP EA  + 
Sbjct: 13   YPIKSCRGISVSQASLAPTGFRWDRNWLVVNSKGRAYTQRVEPKLALVEVELPHEACLDG 72

Query: 373  WEPTSESYLVLKAPGMDILKVSLSKTCEKIEGVSVWEWSGSALDEGAEASEWFSNYLGKP 552
            WEPT+ S++ +KAP M +LK+ L+K  E  + +SVWEWSGSALDEGAEA+ WFS++LGKP
Sbjct: 73   WEPTANSFMEIKAPRMGVLKIPLAKAHEVADNISVWEWSGSALDEGAEAARWFSDFLGKP 132

Query: 553  SRLVHFNTATEARAVDPDFAPGYRTMFSDGYPFMLLSQGSLDALNKLLKEPVPVNRFRPN 732
            SRLV FN A+E RAVDP++A G+R MFSDGYPF+LLSQGSLDALNKLLKEPVPVNRFRPN
Sbjct: 133  SRLVRFNAASETRAVDPNYARGHRVMFSDGYPFLLLSQGSLDALNKLLKEPVPVNRFRPN 192

Query: 733  ILVDGCESFDEDLWTEIKINKFAFSGVKLCARCKVPTINQDNGIAGQEPTETLVNFRSDK 912
            I +DGCE F EDLWTEI+INK+ F GVKLC+RCKVPTI+Q  G+A  EP  TL+  RSD 
Sbjct: 193  IFIDGCEPFSEDLWTEIRINKYTFEGVKLCSRCKVPTIDQATGVASSEPNGTLMKIRSDN 252

Query: 913  VLRPTRKQQGKVYFGQNLVCKESLRDGKGKVIKVGDPIYVLKKVSTRVDAAA 1068
            VLRP++KQQGK+YFGQNLV K++L  GKG ++K+GDP++V+K VS+  +AAA
Sbjct: 253  VLRPSKKQQGKIYFGQNLVWKDNLNGGKGNIVKLGDPVFVVKNVSSAAEAAA 304


>ref|XP_002460665.1| hypothetical protein SORBIDRAFT_02g032800 [Sorghum bicolor]
            gi|241924042|gb|EER97186.1| hypothetical protein
            SORBIDRAFT_02g032800 [Sorghum bicolor]
          Length = 326

 Score =  433 bits (1114), Expect = e-119
 Identities = 209/324 (64%), Positives = 250/324 (77%), Gaps = 3/324 (0%)
 Frame = +1

Query: 106  MEKASAMVSSIFGGXXXXXXXXXXXXXXX--YPIKSCRGISVPQASITPTGLRWDRQWLV 279
            MEKA++ +SS+ GG                 YPIKSCRG++VPQA I  TG RWDRQW+V
Sbjct: 3    MEKAASFLSSLLGGGGGGGGEPAATVKSIFIYPIKSCRGLAVPQAPIASTGFRWDRQWVV 62

Query: 280  VNSKGRAYTQRIEPKLALVQVELPSEAFHEDWEPTSESYLVLKAPGMDILKVSLSKTCEK 459
            VN+KGRAYTQR+EPKLALVQVELP EAF EDW+PT + ++ ++APGMD LK+ L+     
Sbjct: 63   VNAKGRAYTQRVEPKLALVQVELPPEAFDEDWQPTPDDHMAIRAPGMDTLKIPLAAEHAT 122

Query: 460  IEGVSVWEWSGSALDEGAEASEWFSNYLGKPSRLVHFNTATEARAVDPDFAPGYRTMFSD 639
            I+ VSVWEWSGSA DEGAEA+EWFS Y GKPSRLV F  A+E R  DPDFA GY+  F+D
Sbjct: 123  IDDVSVWEWSGSAYDEGAEAAEWFSTYFGKPSRLVRFKEASETRPTDPDFAQGYKIAFND 182

Query: 640  GYPFMLLSQGSLDALNKLLKEPVPVNRFRPNILVDGCESFDEDLWTEIKINKFAFSGVKL 819
             +PF++ SQGSLDALN++LKEPVP+NRFRPNILVDGC  + EDLW  IKIN   F GVKL
Sbjct: 183  CFPFLIASQGSLDALNEILKEPVPMNRFRPNILVDGCHPYSEDLWKTIKINNLTFLGVKL 242

Query: 820  CARCKVPTINQDNGIAGQEPTETLVNFRSDKVLRPTRKQQGKVYFGQNLVCKESLR-DGK 996
            C RCKVPTINQ+NGI G EPTETL+ FRSD+VLRP+ K + +VYFGQNLVCKESL   GK
Sbjct: 243  CNRCKVPTINQENGIPGTEPTETLLTFRSDQVLRPSHKNKRQVYFGQNLVCKESLSGKGK 302

Query: 997  GKVIKVGDPIYVLKKVSTRVDAAA 1068
            GK+IKVGDP+YVL+  ++  +A A
Sbjct: 303  GKIIKVGDPVYVLQAFASSDEAPA 326


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