BLASTX nr result

ID: Coptis24_contig00008347 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00008347
         (1117 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28019.3| unnamed protein product [Vitis vinifera]              558   e-157
ref|XP_002280568.1| PREDICTED: uncharacterized protein LOC100247...   558   e-157
ref|XP_002324440.1| predicted protein [Populus trichocarpa] gi|2...   544   e-152
ref|XP_004139353.1| PREDICTED: uncharacterized protein LOC101211...   543   e-152
emb|CAN76867.1| hypothetical protein VITISV_012309 [Vitis vinifera]   535   e-150

>emb|CBI28019.3| unnamed protein product [Vitis vinifera]
          Length = 536

 Score =  558 bits (1439), Expect = e-157
 Identities = 276/344 (80%), Positives = 306/344 (88%)
 Frame = +1

Query: 7    TLHGSSDDIGWLQRAPGVPPVEDGTTRFMELLQGIRNGKHTLPNSFVYLLIPGLFSNLSP 186
            TLHGSSDDIGWLQ  PGV PVEDGT RF+ELL+ IRNGKHTLPNS+VYLLIPGLF N  P
Sbjct: 192  TLHGSSDDIGWLQCTPGVAPVEDGTARFLELLREIRNGKHTLPNSYVYLLIPGLFGNHGP 251

Query: 187  LYFVNTKRFFSKMGLACHIAKIHSEAAVEHNAWELKHYIEELYWGSGKHVMLLGHSKGGV 366
            LYFVNTK+FFSKMGLACHIAKIHSEA+VEHNAWELK YIEELYWGSGK V+LLGHSKGGV
Sbjct: 252  LYFVNTKKFFSKMGLACHIAKIHSEASVEHNAWELKQYIEELYWGSGKCVILLGHSKGGV 311

Query: 367  DAAAALSIYWTELKDKVAGLALVQSPYGGTPIASDFLREGQIADQETRRVMEFLICKLIK 546
            DAAAALS+YW++LKDKVAGLALVQSPYGGTP+ASD LREGQIAD+ETRR++EFLICKLIK
Sbjct: 312  DAAAALSMYWSDLKDKVAGLALVQSPYGGTPLASDILREGQIADRETRRILEFLICKLIK 371

Query: 547  GDMRALDDLTYEKRKEFITKHKLPEHIPLISFYSEASTAPGVLATMSHIAHAELPWLPLP 726
            GD++AL+DLTYEKR+EFI  HKLPE IPLISF+SEAS AP VLATMSH+AHAELP LPLP
Sbjct: 372  GDIQALEDLTYEKRREFIMNHKLPECIPLISFHSEASVAPSVLATMSHVAHAELPLLPLP 431

Query: 727  RFGMAFFDSIQASYKVPVVIPLAAAMAVSALHLKLRYGEKSDGLVTCRDAAVPGSVFVHP 906
            RFG    +S     KVPVVIP++A +++ ALHL+LRYGEKSDGLVTCRDA VPGSV V P
Sbjct: 432  RFGSK--ESDVQGCKVPVVIPISAVLSLCALHLQLRYGEKSDGLVTCRDAEVPGSVVVKP 489

Query: 907  DQKLDHAWTVYSSMKQDLSEPNASEMCEAILTLLVEIGKMKKEQ 1038
            D KLDHAW VY S K+DLSEP+A EM EA+LTLLVE+GK KKEQ
Sbjct: 490  DLKLDHAWMVYFSGKKDLSEPDACEMSEALLTLLVELGKTKKEQ 533


>ref|XP_002280568.1| PREDICTED: uncharacterized protein LOC100247423 [Vitis vinifera]
          Length = 431

 Score =  558 bits (1439), Expect = e-157
 Identities = 276/344 (80%), Positives = 306/344 (88%)
 Frame = +1

Query: 7    TLHGSSDDIGWLQRAPGVPPVEDGTTRFMELLQGIRNGKHTLPNSFVYLLIPGLFSNLSP 186
            TLHGSSDDIGWLQ  PGV PVEDGT RF+ELL+ IRNGKHTLPNS+VYLLIPGLF N  P
Sbjct: 87   TLHGSSDDIGWLQCTPGVAPVEDGTARFLELLREIRNGKHTLPNSYVYLLIPGLFGNHGP 146

Query: 187  LYFVNTKRFFSKMGLACHIAKIHSEAAVEHNAWELKHYIEELYWGSGKHVMLLGHSKGGV 366
            LYFVNTK+FFSKMGLACHIAKIHSEA+VEHNAWELK YIEELYWGSGK V+LLGHSKGGV
Sbjct: 147  LYFVNTKKFFSKMGLACHIAKIHSEASVEHNAWELKQYIEELYWGSGKCVILLGHSKGGV 206

Query: 367  DAAAALSIYWTELKDKVAGLALVQSPYGGTPIASDFLREGQIADQETRRVMEFLICKLIK 546
            DAAAALS+YW++LKDKVAGLALVQSPYGGTP+ASD LREGQIAD+ETRR++EFLICKLIK
Sbjct: 207  DAAAALSMYWSDLKDKVAGLALVQSPYGGTPLASDILREGQIADRETRRILEFLICKLIK 266

Query: 547  GDMRALDDLTYEKRKEFITKHKLPEHIPLISFYSEASTAPGVLATMSHIAHAELPWLPLP 726
            GD++AL+DLTYEKR+EFI  HKLPE IPLISF+SEAS AP VLATMSH+AHAELP LPLP
Sbjct: 267  GDIQALEDLTYEKRREFIMNHKLPECIPLISFHSEASVAPSVLATMSHVAHAELPLLPLP 326

Query: 727  RFGMAFFDSIQASYKVPVVIPLAAAMAVSALHLKLRYGEKSDGLVTCRDAAVPGSVFVHP 906
            RFG    +S     KVPVVIP++A +++ ALHL+LRYGEKSDGLVTCRDA VPGSV V P
Sbjct: 327  RFGSK--ESDVQGCKVPVVIPISAVLSLCALHLQLRYGEKSDGLVTCRDAEVPGSVVVKP 384

Query: 907  DQKLDHAWTVYSSMKQDLSEPNASEMCEAILTLLVEIGKMKKEQ 1038
            D KLDHAW VY S K+DLSEP+A EM EA+LTLLVE+GK KKEQ
Sbjct: 385  DLKLDHAWMVYFSGKKDLSEPDACEMSEALLTLLVELGKTKKEQ 428


>ref|XP_002324440.1| predicted protein [Populus trichocarpa] gi|222865874|gb|EEF03005.1|
            predicted protein [Populus trichocarpa]
          Length = 350

 Score =  544 bits (1402), Expect = e-152
 Identities = 267/345 (77%), Positives = 304/345 (88%)
 Frame = +1

Query: 4    KTLHGSSDDIGWLQRAPGVPPVEDGTTRFMELLQGIRNGKHTLPNSFVYLLIPGLFSNLS 183
            KTL GSSDDIGWLQ    + PVEDGT +F+  +   +NG+H LPNSFVYLLIPGLFSN  
Sbjct: 7    KTLRGSSDDIGWLQHTRDMAPVEDGTDQFLFDISD-KNGEHNLPNSFVYLLIPGLFSNHG 65

Query: 184  PLYFVNTKRFFSKMGLACHIAKIHSEAAVEHNAWELKHYIEELYWGSGKHVMLLGHSKGG 363
            PLYFV TKRFFSKMGLACHIAKIHSEA+VEHNAWELK YIEELYWGSGK V+LLGHSKGG
Sbjct: 66   PLYFVGTKRFFSKMGLACHIAKIHSEASVEHNAWELKQYIEELYWGSGKRVILLGHSKGG 125

Query: 364  VDAAAALSIYWTELKDKVAGLALVQSPYGGTPIASDFLREGQIADQETRRVMEFLICKLI 543
            VDAAAALSIY ++LK+KVAGLALVQSPY GTPIASD LREGQIAD+ETRR+ME LICK+I
Sbjct: 126  VDAAAALSIYSSDLKNKVAGLALVQSPYAGTPIASDILREGQIADKETRRIMELLICKII 185

Query: 544  KGDMRALDDLTYEKRKEFITKHKLPEHIPLISFYSEASTAPGVLATMSHIAHAELPWLPL 723
            KGD+RAL+DLTY+KR+EFI+KH+L + IPLISF+SEAS APGVLATM+HIAHAELPWLPL
Sbjct: 186  KGDIRALEDLTYDKRREFISKHQLSKEIPLISFHSEASIAPGVLATMTHIAHAELPWLPL 245

Query: 724  PRFGMAFFDSIQASYKVPVVIPLAAAMAVSALHLKLRYGEKSDGLVTCRDAAVPGSVFVH 903
            P+FG    D  QA ++VPVVIP++AAMAV ALHL+LRYGEKSDGLVTCRDA VPGSV V 
Sbjct: 246  PKFGSEASDDFQAGHQVPVVIPVSAAMAVCALHLQLRYGEKSDGLVTCRDAEVPGSVVVR 305

Query: 904  PDQKLDHAWTVYSSMKQDLSEPNASEMCEAILTLLVEIGKMKKEQ 1038
            PD+KLDHAW VYSS K+D SEP + EMCEA+LT+LVE+GKMK+E+
Sbjct: 306  PDRKLDHAWMVYSSRKKDPSEPESCEMCEALLTMLVELGKMKQER 350


>ref|XP_004139353.1| PREDICTED: uncharacterized protein LOC101211085 [Cucumis sativus]
            gi|449516111|ref|XP_004165091.1| PREDICTED:
            uncharacterized protein LOC101227060 [Cucumis sativus]
          Length = 515

 Score =  543 bits (1400), Expect = e-152
 Identities = 263/344 (76%), Positives = 296/344 (86%)
 Frame = +1

Query: 4    KTLHGSSDDIGWLQRAPGVPPVEDGTTRFMELLQGIRNGKHTLPNSFVYLLIPGLFSNLS 183
            KTL GSS+DIGWLQ  PG+PPV DGT RF+ELL  IRNG+H LPNSFVYLLIPGLFSN  
Sbjct: 170  KTLLGSSNDIGWLQTTPGMPPVVDGTARFLELLSDIRNGEHRLPNSFVYLLIPGLFSNHG 229

Query: 184  PLYFVNTKRFFSKMGLACHIAKIHSEAAVEHNAWELKHYIEELYWGSGKHVMLLGHSKGG 363
            PLYFV TK+FFSKMGL CHIAKIHSEA+VEHNAWELK Y+EELYWGSGK VMLLGHSKGG
Sbjct: 230  PLYFVGTKKFFSKMGLTCHIAKIHSEASVEHNAWELKEYVEELYWGSGKRVMLLGHSKGG 289

Query: 364  VDAAAALSIYWTELKDKVAGLALVQSPYGGTPIASDFLREGQIADQETRRVMEFLICKLI 543
            VDAAAALSIY  ELKDKVAGLALVQSPYGGTP+ASDFLR+GQIAD+ETR++ME LICK+I
Sbjct: 290  VDAAAALSIYCNELKDKVAGLALVQSPYGGTPLASDFLRDGQIADKETRKIMELLICKII 349

Query: 544  KGDMRALDDLTYEKRKEFITKHKLPEHIPLISFYSEASTAPGVLATMSHIAHAELPWLPL 723
            KGD+RAL+DLTY+KRKEFI  H LPE++P++SF+SEA  APGVLATM+HIAHAELPWLPL
Sbjct: 350  KGDIRALEDLTYDKRKEFIMNHNLPENVPILSFHSEAQVAPGVLATMTHIAHAELPWLPL 409

Query: 724  PRFGMAFFDSIQASYKVPVVIPLAAAMAVSALHLKLRYGEKSDGLVTCRDAAVPGSVFVH 903
            PR        +Q   +VPVVIPL+A MA+ ALHL+LRYGEKSDGLVTCRDA VPGSV V 
Sbjct: 410  PRSWTESDTVVQGGRRVPVVIPLSAVMALCALHLQLRYGEKSDGLVTCRDAEVPGSVVVR 469

Query: 904  PDQKLDHAWTVYSSMKQDLSEPNASEMCEAILTLLVEIGKMKKE 1035
            P+QKLDH W VYSS K+   +P+A EMCEAILTLLVE+G   K+
Sbjct: 470  PNQKLDHGWMVYSSRKKSTGDPDACEMCEAILTLLVELGMGMKQ 513


>emb|CAN76867.1| hypothetical protein VITISV_012309 [Vitis vinifera]
          Length = 1908

 Score =  535 bits (1378), Expect = e-150
 Identities = 264/330 (80%), Positives = 295/330 (89%)
 Frame = +1

Query: 49   APGVPPVEDGTTRFMELLQGIRNGKHTLPNSFVYLLIPGLFSNLSPLYFVNTKRFFSKMG 228
            +PGV PVEDGT RF+ELL+ IRNGKHTLPNS+VYLLIPGLF N  PLYFVNTK+FFSKMG
Sbjct: 1577 SPGVAPVEDGTARFLELLREIRNGKHTLPNSYVYLLIPGLFXNHGPLYFVNTKKFFSKMG 1636

Query: 229  LACHIAKIHSEAAVEHNAWELKHYIEELYWGSGKHVMLLGHSKGGVDAAAALSIYWTELK 408
            LACHIAKIHSEA+VEHNAWELK YIEELYWGSGK V+LLGHSKGGVDAAAALS+YW++LK
Sbjct: 1637 LACHIAKIHSEASVEHNAWELKQYIEELYWGSGKCVILLGHSKGGVDAAAALSMYWSDLK 1696

Query: 409  DKVAGLALVQSPYGGTPIASDFLREGQIADQETRRVMEFLICKLIKGDMRALDDLTYEKR 588
            DKVAGLALVQSPYGGTP+ASD LREGQIAD+ETRR++EFLICKLIKGD++AL+DLTYEKR
Sbjct: 1697 DKVAGLALVQSPYGGTPLASDILREGQIADRETRRILEFLICKLIKGDIQALEDLTYEKR 1756

Query: 589  KEFITKHKLPEHIPLISFYSEASTAPGVLATMSHIAHAELPWLPLPRFGMAFFDSIQASY 768
            +EFI  HKLPE IPLISF+SEAS AP VLATMSH+AHAELP LPLPRFG    D +Q   
Sbjct: 1757 REFIMNHKLPECIPLISFHSEASVAPSVLATMSHVAHAELPLLPLPRFGSKESD-VQEGC 1815

Query: 769  KVPVVIPLAAAMAVSALHLKLRYGEKSDGLVTCRDAAVPGSVFVHPDQKLDHAWTVYSSM 948
            KVPVVIP++A +++ ALHL+LRYGEKSDGLVTCRDA VPGSV V PD KLDHAW VY S 
Sbjct: 1816 KVPVVIPISAVLSLCALHLQLRYGEKSDGLVTCRDAEVPGSVVVKPDLKLDHAWMVYFSG 1875

Query: 949  KQDLSEPNASEMCEAILTLLVEIGKMKKEQ 1038
            K+DLSEP+A EM EA+LTLLVE+GK KKEQ
Sbjct: 1876 KKDLSEPDACEMSEALLTLLVELGKTKKEQ 1905


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