BLASTX nr result
ID: Coptis24_contig00008308
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00008308
(1095 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002440902.1| hypothetical protein SORBIDRAFT_09g016160 [S... 129 2e-61
ref|XP_002446463.1| hypothetical protein SORBIDRAFT_06g016400 [S... 129 2e-60
ref|NP_001046804.2| Os02g0463700 [Oryza sativa Japonica Group] g... 125 9e-60
ref|XP_002440837.1| hypothetical protein SORBIDRAFT_09g008040 [S... 129 3e-59
ref|XP_002453364.1| hypothetical protein SORBIDRAFT_04g004660 [S... 128 2e-58
>ref|XP_002440902.1| hypothetical protein SORBIDRAFT_09g016160 [Sorghum bicolor]
gi|241946187|gb|EES19332.1| hypothetical protein
SORBIDRAFT_09g016160 [Sorghum bicolor]
Length = 1379
Score = 129 bits (324), Expect(4) = 2e-61
Identities = 62/138 (44%), Positives = 95/138 (68%)
Frame = -1
Query: 807 SKAIIIQRIPEYYRWLAKERTWVRRLSTLKVIGRIYTIHLSEGDIFFLRVLLNHVRGPTS 628
+++++ + +PE+YRW++ + W RR + IGRI + SEG+ ++LRVLLNHVRGPTS
Sbjct: 711 ARSLLYRDMPEHYRWISGRKIWQRRKQKGQ-IGRIVYANPSEGERYYLRVLLNHVRGPTS 769
Query: 627 FHDMLYVNGERCKTFKEAAERLGLLENDDSYRACLEEASRVKMSSALRSLFVTILVYCQP 448
F D+ V G C TF+E+ E+ GL+E D++ CL EA+ +M ALR LF T+LV+C+
Sbjct: 770 FEDLKTVAGILCSTFRESCEKRGLIETDNTIDDCLVEAATFQMPYALRRLFATVLVHCEA 829
Query: 447 TGVRRLWDEFVMAMSEDY 394
T + LW++ +M+EDY
Sbjct: 830 TRICALWEKHKESMAEDY 847
Score = 72.0 bits (175), Expect(4) = 2e-61
Identities = 41/104 (39%), Positives = 59/104 (56%)
Frame = -2
Query: 1094 KGLDCVSLEVRRGPEFDEIQHFVDGRWNCAPEALWKICKFALSKIYPSVERLHIHLPNRQ 915
KG DC S V +EI+ + + R+ PEA+ +I F L + PSV +L HLPN Q
Sbjct: 615 KGHDCASFSVVDAGVINEIRQYRNARYVTPPEAVHRIFGFPLFGVNPSVLQLQCHLPNMQ 674
Query: 914 QLRYYSHQSVSNVLADELNSKTMLTEFFKLYRDDHEARQLLYRE 783
+ +S+ V+ + +S T LTEFF + R+D AR LLYR+
Sbjct: 675 SVIIDETKSLEEVVNNPKSSMTTLTEFFTVCREDSFARSLLYRD 718
Score = 64.3 bits (155), Expect(4) = 2e-61
Identities = 31/43 (72%), Positives = 37/43 (86%)
Frame = -1
Query: 129 KNSGVFFVDGPGGT*KTYLYRAILASIRKDGGIALATATSGIA 1
K S VFFVDGPGGT KT+LY+A+LA++R G IA+ATATSGIA
Sbjct: 935 KKSQVFFVDGPGGTGKTFLYKALLAAVRSKGLIAIATATSGIA 977
Score = 39.7 bits (91), Expect(4) = 2e-61
Identities = 26/86 (30%), Positives = 39/86 (45%)
Frame = -3
Query: 370 EVLHNQVLNDISKLLVLQNRVLSEYDLPPLKKXXXXXXXXXXXLQNELSVVVPHEDLLSI 191
E++ VL DI LL + + +DLP L ++ ELSV V E L
Sbjct: 855 ELVEQMVLRDIRDLLQSMGKDIKNFDLPELSDAADYSNDKMRLVREELSVGVDPEHLQIK 914
Query: 190 DHLNQEQLSAYRAILQVIEEEKQWGF 113
LN+EQL+ + I+ + +K F
Sbjct: 915 GSLNREQLAGFHEIMNHVLNKKSQVF 940
>ref|XP_002446463.1| hypothetical protein SORBIDRAFT_06g016400 [Sorghum bicolor]
gi|241937646|gb|EES10791.1| hypothetical protein
SORBIDRAFT_06g016400 [Sorghum bicolor]
Length = 998
Score = 129 bits (325), Expect(4) = 2e-60
Identities = 65/154 (42%), Positives = 96/154 (62%), Gaps = 2/154 (1%)
Frame = -1
Query: 807 SKAIIIQRIPEYYRWLAKERTWVRRLSTLKVIGRIYTIHLSEGDIFFLRVLLNHVRGPTS 628
++ ++ + PE+YRW++ + W RR IGRI H +EG+ +FLRVLLNHVRG TS
Sbjct: 328 ARTLLYREFPEHYRWISGRKVWQRRKKKAGQIGRIVYAHPAEGERYFLRVLLNHVRGSTS 387
Query: 627 FHDMLYVNGERCKTFKEAAERLGLLENDDSYRACLEEASRVKMSSALRSLFVTILVYCQP 448
+ D+ V+G TF+E E+ GL+E D S L +A +M +ALR LF TILV+C+
Sbjct: 388 YEDLRTVDGITYSTFRETCEKPGLVETDKSLDDALVDAKTFQMPAALRRLFATILVFCEA 447
Query: 447 TGVRRLWDEFVMAMSEDY--PSSNLHVLKYCTIR 352
T +R LW + ++SEDY +SN V++ +R
Sbjct: 448 TNIRELWVKHKESLSEDYKRDNSNSSVVEQMVLR 481
Score = 74.7 bits (182), Expect(4) = 2e-60
Identities = 40/105 (38%), Positives = 62/105 (59%)
Frame = -2
Query: 1094 KGLDCVSLEVRRGPEFDEIQHFVDGRWNCAPEALWKICKFALSKIYPSVERLHIHLPNRQ 915
KG D V +EI+ + D R+ PEA+++I F L +YPSV +L +HLPN Q
Sbjct: 232 KGHDRAEFLVETPGVINEIRRYRDARYISPPEAVYRIFGFHLFGVYPSVLQLQLHLPNMQ 291
Query: 914 QLRYYSHQSVSNVLADELNSKTMLTEFFKLYRDDHEARQLLYREY 780
+ Q++ +V+ ++ ++ T LTE+F + R D AR LLYRE+
Sbjct: 292 SVIIDESQNLQDVINNKSSTMTTLTEYFNMNRTDSFARTLLYREF 336
Score = 62.0 bits (149), Expect(4) = 2e-60
Identities = 30/41 (73%), Positives = 35/41 (85%)
Frame = -1
Query: 123 SGVFFVDGPGGT*KTYLYRAILASIRKDGGIALATATSGIA 1
S VFFVDGPGGT KT+LY+AILA +R +G I +ATATSGIA
Sbjct: 555 SRVFFVDGPGGTGKTFLYKAILARVRSEGLIGIATATSGIA 595
Score = 35.4 bits (80), Expect(4) = 2e-60
Identities = 23/81 (28%), Positives = 34/81 (41%)
Frame = -3
Query: 367 VLHNQVLNDISKLLVLQNRVLSEYDLPPLKKXXXXXXXXXXXLQNELSVVVPHEDLLSID 188
V+ VL DI +L + + YDLP L ++ ELS+ V E L
Sbjct: 474 VVEQMVLRDIRDMLQSMGKDIRNYDLPELNDAVQFSNDMMREVKEELSIQVDQEHLDIYK 533
Query: 187 HLNQEQLSAYRAILQVIEEEK 125
LN EQ + + I+ + K
Sbjct: 534 SLNNEQQAGFDEIVHHVLNNK 554
>ref|NP_001046804.2| Os02g0463700 [Oryza sativa Japonica Group]
gi|255670879|dbj|BAF08718.2| Os02g0463700 [Oryza sativa
Japonica Group]
Length = 1221
Score = 125 bits (313), Expect(4) = 9e-60
Identities = 60/140 (42%), Positives = 91/140 (65%), Gaps = 2/140 (1%)
Frame = -1
Query: 807 SKAIIIQRIPEYYRWLAKE--RTWVRRLSTLKVIGRIYTIHLSEGDIFFLRVLLNHVRGP 634
++ I+ Q PEYY W + + W +R + +GRI H +EG+ ++LRVLLNHV G
Sbjct: 843 ARGILYQDFPEYYTWQTGKGKKFWQKRKIAVHQVGRIVLAHPAEGERYYLRVLLNHVTGA 902
Query: 633 TSFHDMLYVNGERCKTFKEAAERLGLLENDDSYRACLEEASRVKMSSALRSLFVTILVYC 454
T + D+ +G+ +F+EAAE+ GL+E D++ CL EA +M S+LR LF TILV+C
Sbjct: 903 TCYEDLRTFDGKILPSFREAAEKRGLIEADNTLDECLTEAELFRMPSSLRRLFATILVFC 962
Query: 453 QPTGVRRLWDEFVMAMSEDY 394
+P+ +R LW+ + AMSED+
Sbjct: 963 EPSDIRTLWNNHLEAMSEDF 982
Score = 82.0 bits (201), Expect(4) = 9e-60
Identities = 44/108 (40%), Positives = 64/108 (59%), Gaps = 3/108 (2%)
Frame = -2
Query: 1094 KGLDCVSLEVR---RGPEFDEIQHFVDGRWNCAPEALWKICKFALSKIYPSVERLHIHLP 924
KG D S+ V + DEI+ + D RW PEALW+I F LSKI+P+V +L +HLP
Sbjct: 744 KGHDRASVSVNGVDNEGDIDEIRQYRDARWVTPPEALWRIYGFDLSKIHPAVLQLPLHLP 803
Query: 923 NRQQLRYYSHQSVSNVLADELNSKTMLTEFFKLYRDDHEARQLLYREY 780
N + Y Q + VL ++ K+MLT +F+ R EAR +LY+++
Sbjct: 804 NMHMVAYRGKQDIQEVLNEDGAEKSMLTAYFEANRLYKEARGILYQDF 851
Score = 64.3 bits (155), Expect(4) = 9e-60
Identities = 29/39 (74%), Positives = 36/39 (92%)
Frame = -1
Query: 117 VFFVDGPGGT*KTYLYRAILASIRKDGGIALATATSGIA 1
VFFVDGPGGT KT+LY+A+LA++RK G IA+ATATSG+A
Sbjct: 1074 VFFVDGPGGTGKTFLYKALLATVRKQGKIAIATATSGVA 1112
Score = 28.1 bits (61), Expect(4) = 9e-60
Identities = 18/80 (22%), Positives = 35/80 (43%)
Frame = -3
Query: 364 LHNQVLNDISKLLVLQNRVLSEYDLPPLKKXXXXXXXXXXXLQNELSVVVPHEDLLSIDH 185
+ VL +I +L + + + LP + + + E ++ V ED+ +
Sbjct: 992 VQQMVLINIRDMLQSMGKDIRSFPLPEIDELHDTTNGVPREIIEESTIKVDPEDVNLCNS 1051
Query: 184 LNQEQLSAYRAILQVIEEEK 125
LN EQ +AY IL ++ +
Sbjct: 1052 LNTEQRAAYDEILAAVDHNE 1071
>ref|XP_002440837.1| hypothetical protein SORBIDRAFT_09g008040 [Sorghum bicolor]
gi|241946122|gb|EES19267.1| hypothetical protein
SORBIDRAFT_09g008040 [Sorghum bicolor]
Length = 1679
Score = 129 bits (324), Expect(4) = 3e-59
Identities = 65/142 (45%), Positives = 89/142 (62%)
Frame = -1
Query: 807 SKAIIIQRIPEYYRWLAKERTWVRRLSTLKVIGRIYTIHLSEGDIFFLRVLLNHVRGPTS 628
++ I+ + PE+YRW+ ++ W RR IGRI + +EG+ +FLRVLLNHVRG TS
Sbjct: 1010 ARKILYREFPEHYRWITGKKMWQRRKIASAQIGRIVYANPAEGERYFLRVLLNHVRGATS 1069
Query: 627 FHDMLYVNGERCKTFKEAAERLGLLENDDSYRACLEEASRVKMSSALRSLFVTILVYCQP 448
F D+ V G TF+EA E+ GL+E D S CL EA+ +M ALR LF TILV+ +
Sbjct: 1070 FEDLRTVAGVTYSTFREACEKRGLIETDRSIDDCLTEATTFQMPCALRRLFATILVFGEA 1129
Query: 447 TGVRRLWDEFVMAMSEDYPSSN 382
T +R LW++ A+ EDY N
Sbjct: 1130 TNIRGLWEKHKEALGEDYSRDN 1151
Score = 68.2 bits (165), Expect(4) = 3e-59
Identities = 36/111 (32%), Positives = 64/111 (57%), Gaps = 6/111 (5%)
Frame = -2
Query: 1094 KGLDCVSLEVRRGPE------FDEIQHFVDGRWNCAPEALWKICKFALSKIYPSVERLHI 933
KG D S+ V +EI+ + + R+ APEA+ +I F + +YP+V +L +
Sbjct: 908 KGHDQASISVNADQNDTDDGVINEIKQYRNARYISAPEAVHRIFGFPMFGVYPAVLQLQL 967
Query: 932 HLPNRQQLRYYSHQSVSNVLADELNSKTMLTEFFKLYRDDHEARQLLYREY 780
HLPN Q + Y +++ +V+ +++T LTE+F ++ AR++LYRE+
Sbjct: 968 HLPNMQSVTYNEDENLEDVVRRTSSNRTTLTEYFSKNSEEVAARKILYREF 1018
Score = 63.5 bits (153), Expect(4) = 3e-59
Identities = 31/43 (72%), Positives = 36/43 (83%)
Frame = -1
Query: 129 KNSGVFFVDGPGGT*KTYLYRAILASIRKDGGIALATATSGIA 1
K S VFFVDGPGGT KT+LY+A+LA +R G IA+ATATSGIA
Sbjct: 1235 KKSQVFFVDGPGGTGKTFLYKALLARVRSKGLIAIATATSGIA 1277
Score = 37.0 bits (84), Expect(4) = 3e-59
Identities = 22/85 (25%), Positives = 40/85 (47%)
Frame = -3
Query: 367 VLHNQVLNDISKLLVLQNRVLSEYDLPPLKKXXXXXXXXXXXLQNELSVVVPHEDLLSID 188
++ VL DI +L + + +Y LPP+ + ++ E +V V E L +
Sbjct: 1156 IVEQMVLRDIRDMLHSMGKNIRDYGLPPICEIGPTSIDMMKEVREEQNVYVEQEHLDIFN 1215
Query: 187 HLNQEQLSAYRAILQVIEEEKQWGF 113
LN+EQ + I+Q + ++K F
Sbjct: 1216 SLNKEQRQGFDEIIQHVFDKKSQVF 1240
>ref|XP_002453364.1| hypothetical protein SORBIDRAFT_04g004660 [Sorghum bicolor]
gi|241933195|gb|EES06340.1| hypothetical protein
SORBIDRAFT_04g004660 [Sorghum bicolor]
Length = 1145
Score = 128 bits (321), Expect(4) = 2e-58
Identities = 67/144 (46%), Positives = 96/144 (66%), Gaps = 2/144 (1%)
Frame = -1
Query: 807 SKAIIIQRIPEYYRWLAKERTWVRRL--STLKVIGRIYTIHLSEGDIFFLRVLLNHVRGP 634
++ I+ + PEYY+W ++ + W+RR + L+ IGR+ + +EG+ ++LRVLLNHV G
Sbjct: 468 ARGILYRDFPEYYKWDSQGKQWIRRARKNHLRQIGRVVCANPAEGERYYLRVLLNHVVGA 527
Query: 633 TSFHDMLYVNGERCKTFKEAAERLGLLENDDSYRACLEEASRVKMSSALRSLFVTILVYC 454
TSF D+ V+GE TF EAAER GL+E D++ L EA+ M ALR LF TILV+C
Sbjct: 528 TSFIDLRTVSGELLPTFCEAAERRGLIEADNTLHEGLAEATLWMMPYALRRLFATILVFC 587
Query: 453 QPTGVRRLWDEFVMAMSEDYPSSN 382
+P+ V LW++ AMSEDY +N
Sbjct: 588 EPSDVLELWEKHKEAMSEDYRRNN 611
Score = 70.9 bits (172), Expect(4) = 2e-58
Identities = 40/111 (36%), Positives = 58/111 (52%), Gaps = 6/111 (5%)
Frame = -2
Query: 1094 KGLDCVSLEVRRGPE------FDEIQHFVDGRWNCAPEALWKICKFALSKIYPSVERLHI 933
KG D S+ VR + DEI+ + D RW PEALW+I F +S PSV L +
Sbjct: 366 KGHDRASVAVREADKEDNEGNIDEIKQYRDARWVTPPEALWRIYGFDISDRSPSVLSLQL 425
Query: 932 HLPNRQQLRYYSHQSVSNVLADELNSKTMLTEFFKLYRDDHEARQLLYREY 780
HLPN + ++ + V VL ++MLT +F+ AR +LYR++
Sbjct: 426 HLPNMHMVSFHQREGVRRVLNRPGVERSMLTAYFEKNITSEHARGILYRDF 476
Score = 62.4 bits (150), Expect(4) = 2e-58
Identities = 29/40 (72%), Positives = 34/40 (85%)
Frame = -1
Query: 120 GVFFVDGPGGT*KTYLYRAILASIRKDGGIALATATSGIA 1
G+FFVDGPGGT KTYLYRA+LA+IR I +ATATSG+A
Sbjct: 698 GLFFVDGPGGTGKTYLYRALLATIRSQNKIVVATATSGVA 737
Score = 33.5 bits (75), Expect(4) = 2e-58
Identities = 22/77 (28%), Positives = 33/77 (42%)
Frame = -3
Query: 364 LHNQVLNDISKLLVLQNRVLSEYDLPPLKKXXXXXXXXXXXLQNELSVVVPHEDLLSIDH 185
+ VL DI KLL + + Y LP + + E SV +D+
Sbjct: 617 VEQMVLIDIRKLLESMQKDIKMYPLPDIDDTYDPSGNIPREIFEEASVEASIDDMALSKT 676
Query: 184 LNQEQLSAYRAILQVIE 134
LN+EQ +AY I+ I+
Sbjct: 677 LNEEQQAAYNEIMSAID 693