BLASTX nr result

ID: Coptis24_contig00008291 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00008291
         (358 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316847.1| predicted protein [Populus trichocarpa] gi|2...   193   1e-47
ref|XP_003539623.1| PREDICTED: probable LRR receptor-like serine...   189   2e-46
ref|XP_002334523.1| predicted protein [Populus trichocarpa] gi|2...   189   2e-46
ref|XP_002332762.1| predicted protein [Populus trichocarpa] gi|2...   189   2e-46
ref|XP_003596262.1| Receptor-like serine/threonine kinase [Medic...   188   3e-46

>ref|XP_002316847.1| predicted protein [Populus trichocarpa] gi|222859912|gb|EEE97459.1|
            predicted protein [Populus trichocarpa]
          Length = 1015

 Score =  193 bits (491), Expect = 1e-47
 Identities = 92/118 (77%), Positives = 108/118 (91%)
 Frame = -2

Query: 357  APEYAMRGYLTEKADVYSFGIVALEIVSGQSNTNFRPKEEFVYLLDWAYVLQEQGDLLEL 178
            APEYAMRGYLT+KADVYSFG+V LEIVSG+SNTN+RPKEEFVYLLDWAYVLQEQG+LLEL
Sbjct: 843  APEYAMRGYLTDKADVYSFGVVVLEIVSGKSNTNYRPKEEFVYLLDWAYVLQEQGNLLEL 902

Query: 177  VDPSLGANFSEKEAMKMLNIGLLCSNPSRILRPAMSAVVSMLEDHSPVQAPLVVRGSM 4
            VDP+LG+N+SE+EAM+MLN+ LLC+NPS  LRP MS+ VSM+E   PVQAP+V RG+M
Sbjct: 903  VDPNLGSNYSEEEAMRMLNLALLCTNPSPSLRPLMSSAVSMIEGQIPVQAPIVKRGTM 960


>ref|XP_003539623.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase
            At1g53430-like [Glycine max]
          Length = 1007

 Score =  189 bits (481), Expect = 2e-46
 Identities = 90/116 (77%), Positives = 106/116 (91%)
 Frame = -2

Query: 357  APEYAMRGYLTEKADVYSFGIVALEIVSGQSNTNFRPKEEFVYLLDWAYVLQEQGDLLEL 178
            APEYAMRGYLT+KADVYSFGIVALEIVSG+SNTN+RPKEEFVYLLDWAYVLQEQG+LLEL
Sbjct: 838  APEYAMRGYLTDKADVYSFGIVALEIVSGKSNTNYRPKEEFVYLLDWAYVLQEQGNLLEL 897

Query: 177  VDPSLGANFSEKEAMKMLNIGLLCSNPSRILRPAMSAVVSMLEDHSPVQAPLVVRG 10
            VDPSLG+ +S +EAM+ML + LLC+NPS  LRP MS+VVSML+  +P+QAP++ RG
Sbjct: 898  VDPSLGSKYSSEEAMRMLQLALLCTNPSPTLRPCMSSVVSMLDGKTPIQAPIIKRG 953


>ref|XP_002334523.1| predicted protein [Populus trichocarpa] gi|222872797|gb|EEF09928.1|
           predicted protein [Populus trichocarpa]
          Length = 183

 Score =  189 bits (480), Expect = 2e-46
 Identities = 90/118 (76%), Positives = 106/118 (89%)
 Frame = -2

Query: 357 APEYAMRGYLTEKADVYSFGIVALEIVSGQSNTNFRPKEEFVYLLDWAYVLQEQGDLLEL 178
           APEYAMRGYLT+KADVYSFG+V LEIVSG+SNTN+RPKEEFVYLLDWAYVLQEQG+LLEL
Sbjct: 45  APEYAMRGYLTDKADVYSFGVVVLEIVSGKSNTNYRPKEEFVYLLDWAYVLQEQGNLLEL 104

Query: 177 VDPSLGANFSEKEAMKMLNIGLLCSNPSRILRPAMSAVVSMLEDHSPVQAPLVVRGSM 4
           VDPSLG+N+S+ EA++MLN+ LLC+NPS  LRP+MS+ V MLE   PVQAP+V R +M
Sbjct: 105 VDPSLGSNYSKTEALRMLNLALLCTNPSPTLRPSMSSAVKMLEGQIPVQAPIVKRSTM 162


>ref|XP_002332762.1| predicted protein [Populus trichocarpa] gi|222833105|gb|EEE71582.1|
            predicted protein [Populus trichocarpa]
          Length = 872

 Score =  189 bits (480), Expect = 2e-46
 Identities = 90/118 (76%), Positives = 106/118 (89%)
 Frame = -2

Query: 357  APEYAMRGYLTEKADVYSFGIVALEIVSGQSNTNFRPKEEFVYLLDWAYVLQEQGDLLEL 178
            APEYAMRGYLT+KADVYSFG+V LEIVSG+SNTN+RPKEEFVYLLDWAYVLQEQG+LLEL
Sbjct: 685  APEYAMRGYLTDKADVYSFGVVVLEIVSGKSNTNYRPKEEFVYLLDWAYVLQEQGNLLEL 744

Query: 177  VDPSLGANFSEKEAMKMLNIGLLCSNPSRILRPAMSAVVSMLEDHSPVQAPLVVRGSM 4
            VDPSLG+N+S+ EA++MLN+ LLC+NPS  LRP+MS+ V MLE   PVQAP+V R +M
Sbjct: 745  VDPSLGSNYSKTEALRMLNLALLCTNPSPTLRPSMSSAVKMLEGQIPVQAPIVKRSTM 802


>ref|XP_003596262.1| Receptor-like serine/threonine kinase [Medicago truncatula]
            gi|355485310|gb|AES66513.1| Receptor-like
            serine/threonine kinase [Medicago truncatula]
          Length = 1011

 Score =  188 bits (478), Expect = 3e-46
 Identities = 89/119 (74%), Positives = 106/119 (89%)
 Frame = -2

Query: 357  APEYAMRGYLTEKADVYSFGIVALEIVSGQSNTNFRPKEEFVYLLDWAYVLQEQGDLLEL 178
            APEYAMRGYLT+KADVYSFG+VALEIVSG SNTN+RPKEEFVYLLDWAYVLQEQG+LLEL
Sbjct: 836  APEYAMRGYLTDKADVYSFGVVALEIVSGMSNTNYRPKEEFVYLLDWAYVLQEQGNLLEL 895

Query: 177  VDPSLGANFSEKEAMKMLNIGLLCSNPSRILRPAMSAVVSMLEDHSPVQAPLVVRGSMT 1
            VDP+LG+ +S +EAM+ML + LLC+NPS  LRP MS+VVSMLE ++P+QAP++ R   T
Sbjct: 896  VDPTLGSKYSSEEAMRMLQLALLCTNPSPTLRPPMSSVVSMLEGNTPIQAPIIKRSDST 954


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