BLASTX nr result

ID: Coptis24_contig00008275 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00008275
         (640 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303556.1| predicted protein [Populus trichocarpa] gi|2...    76   3e-26
ref|XP_003516684.1| PREDICTED: uncharacterized protein LOC100808...    78   9e-26
ref|XP_002509683.1| conserved hypothetical protein [Ricinus comm...    75   2e-25
ref|XP_003538713.1| PREDICTED: uncharacterized protein LOC100797...    79   3e-25
ref|XP_002299570.1| predicted protein [Populus trichocarpa] gi|2...    75   4e-25

>ref|XP_002303556.1| predicted protein [Populus trichocarpa] gi|222840988|gb|EEE78535.1|
           predicted protein [Populus trichocarpa]
          Length = 596

 Score = 76.3 bits (186), Expect(3) = 3e-26
 Identities = 38/58 (65%), Positives = 43/58 (74%), Gaps = 1/58 (1%)
 Frame = +2

Query: 41  LC-FLP*QYFSTMFKFKGELYLLATDQGFINQPDLVWEKLNEGNGDMVL*QVNLQNLK 211
           LC F    +FSTMFK+ GELYLLATDQG+INQPDLVWEKLNE NGD +    N +  K
Sbjct: 432 LCVFFRNNHFSTMFKYDGELYLLATDQGYINQPDLVWEKLNEVNGDTLFMTGNFKEFK 489



 Score = 45.4 bits (106), Expect(3) = 3e-26
 Identities = 18/28 (64%), Positives = 21/28 (75%)
 Frame = +1

Query: 184 MTGEFTEFKVDNHTNDNWDQQNTMASTA 267
           MTG F EFK ++HTND WD+ N M STA
Sbjct: 481 MTGNFKEFKAESHTNDPWDEHNAMTSTA 508



 Score = 42.7 bits (99), Expect(3) = 3e-26
 Identities = 18/20 (90%), Positives = 19/20 (95%)
 Frame = +3

Query: 3   LFCLLEGLKERELCVFFRNN 62
           LFCL +GLKERELCVFFRNN
Sbjct: 420 LFCLQDGLKERELCVFFRNN 439


>ref|XP_003516684.1| PREDICTED: uncharacterized protein LOC100808340 [Glycine max]
          Length = 726

 Score = 78.2 bits (191), Expect(3) = 9e-26
 Identities = 39/58 (67%), Positives = 44/58 (75%), Gaps = 1/58 (1%)
 Frame = +2

Query: 41  LC-FLP*QYFSTMFKFKGELYLLATDQGFINQPDLVWEKLNEGNGDMVL*QVNLQNLK 211
           LC F    +FSTMFKF+GELYLLATDQG+INQPDLVWEKLNE NGD +    N +  K
Sbjct: 562 LCVFFRNNHFSTMFKFEGELYLLATDQGYINQPDLVWEKLNEVNGDTLFMTGNFKEFK 619



 Score = 42.7 bits (99), Expect(3) = 9e-26
 Identities = 18/20 (90%), Positives = 19/20 (95%)
 Frame = +3

Query: 3   LFCLLEGLKERELCVFFRNN 62
           LFCL +GLKERELCVFFRNN
Sbjct: 550 LFCLQDGLKERELCVFFRNN 569



 Score = 42.0 bits (97), Expect(3) = 9e-26
 Identities = 16/28 (57%), Positives = 20/28 (71%)
 Frame = +1

Query: 184 MTGEFTEFKVDNHTNDNWDQQNTMASTA 267
           MTG F EFKV+NH +  WD+ N + STA
Sbjct: 611 MTGNFKEFKVENHESSTWDENNALTSTA 638


>ref|XP_002509683.1| conserved hypothetical protein [Ricinus communis]
           gi|223549582|gb|EEF51070.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 730

 Score = 75.5 bits (184), Expect(3) = 2e-25
 Identities = 37/58 (63%), Positives = 43/58 (74%), Gaps = 1/58 (1%)
 Frame = +2

Query: 41  LC-FLP*QYFSTMFKFKGELYLLATDQGFINQPDLVWEKLNEGNGDMVL*QVNLQNLK 211
           LC F    +FSTMFK+ GELYLLATDQG++NQPDLVWEKLNE NGD +    N +  K
Sbjct: 573 LCVFFRNNHFSTMFKYDGELYLLATDQGYLNQPDLVWEKLNEVNGDTLFMTGNFKEFK 630



 Score = 43.5 bits (101), Expect(3) = 2e-25
 Identities = 18/28 (64%), Positives = 21/28 (75%)
 Frame = +1

Query: 184 MTGEFTEFKVDNHTNDNWDQQNTMASTA 267
           MTG F EFKV+N  ND W++ N MASTA
Sbjct: 622 MTGNFKEFKVENQGNDTWNEHNAMASTA 649



 Score = 42.7 bits (99), Expect(3) = 2e-25
 Identities = 18/20 (90%), Positives = 19/20 (95%)
 Frame = +3

Query: 3   LFCLLEGLKERELCVFFRNN 62
           LFCL +GLKERELCVFFRNN
Sbjct: 561 LFCLQDGLKERELCVFFRNN 580


>ref|XP_003538713.1| PREDICTED: uncharacterized protein LOC100797239 [Glycine max]
          Length = 723

 Score = 78.6 bits (192), Expect(3) = 3e-25
 Identities = 39/58 (67%), Positives = 44/58 (75%), Gaps = 1/58 (1%)
 Frame = +2

Query: 41  LC-FLP*QYFSTMFKFKGELYLLATDQGFINQPDLVWEKLNEGNGDMVL*QVNLQNLK 211
           LC F    +FSTMFKF+GELYLLATDQG+INQPDLVWEKLNE NGD +    N +  K
Sbjct: 559 LCVFFRNNHFSTMFKFEGELYLLATDQGYINQPDLVWEKLNEVNGDTLFMTSNFKEFK 616



 Score = 42.7 bits (99), Expect(3) = 3e-25
 Identities = 18/20 (90%), Positives = 19/20 (95%)
 Frame = +3

Query: 3   LFCLLEGLKERELCVFFRNN 62
           LFCL +GLKERELCVFFRNN
Sbjct: 547 LFCLQDGLKERELCVFFRNN 566



 Score = 39.7 bits (91), Expect(3) = 3e-25
 Identities = 15/28 (53%), Positives = 19/28 (67%)
 Frame = +1

Query: 184 MTGEFTEFKVDNHTNDNWDQQNTMASTA 267
           MT  F EFKV+NH +  WD+ N + STA
Sbjct: 608 MTSNFKEFKVENHESSTWDENNALTSTA 635


>ref|XP_002299570.1| predicted protein [Populus trichocarpa] gi|222846828|gb|EEE84375.1|
           predicted protein [Populus trichocarpa]
          Length = 686

 Score = 75.1 bits (183), Expect(3) = 4e-25
 Identities = 37/58 (63%), Positives = 43/58 (74%), Gaps = 1/58 (1%)
 Frame = +2

Query: 41  LC-FLP*QYFSTMFKFKGELYLLATDQGFINQPDLVWEKLNEGNGDMVL*QVNLQNLK 211
           LC F    +FSTMFK+ GELYLLATDQG+INQPDLVWEKLNE NGD +    N +  +
Sbjct: 518 LCVFFRNNHFSTMFKYDGELYLLATDQGYINQPDLVWEKLNEVNGDTLFMTGNFKEFR 575



 Score = 42.7 bits (99), Expect(3) = 4e-25
 Identities = 18/20 (90%), Positives = 19/20 (95%)
 Frame = +3

Query: 3   LFCLLEGLKERELCVFFRNN 62
           LFCL +GLKERELCVFFRNN
Sbjct: 506 LFCLQDGLKERELCVFFRNN 525



 Score = 42.7 bits (99), Expect(3) = 4e-25
 Identities = 16/28 (57%), Positives = 22/28 (78%)
 Frame = +1

Query: 184 MTGEFTEFKVDNHTNDNWDQQNTMASTA 267
           MTG F EF+V++H+ND WD+ N + STA
Sbjct: 567 MTGNFKEFRVESHSNDPWDEHNAVTSTA 594


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