BLASTX nr result

ID: Coptis24_contig00008215 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00008215
         (1370 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282694.1| PREDICTED: probable cytosolic iron-sulfur pr...   575   e-162
ref|XP_003625815.1| hypothetical protein MTR_7g104550 [Medicago ...   566   e-159
ref|XP_002528743.1| WD-repeat protein, putative [Ricinus communi...   562   e-158
ref|NP_001242180.1| uncharacterized protein LOC100778826 [Glycin...   556   e-156
ref|XP_004149209.1| PREDICTED: probable cytosolic iron-sulfur pr...   552   e-155

>ref|XP_002282694.1| PREDICTED: probable cytosolic iron-sulfur protein assembly protein
            [Vitis vinifera] gi|297740110|emb|CBI30292.3| unnamed
            protein product [Vitis vinifera]
          Length = 344

 Score =  575 bits (1483), Expect = e-162
 Identities = 266/346 (76%), Positives = 301/346 (86%), Gaps = 2/346 (0%)
 Frame = +3

Query: 48   GLSLNEVQKLEGHTDRVWSVAWNPTTGYAGIPAMLASCSGDKTVRIWQQNPSDKLSDPWL 227
            GL L E+Q+LEGH D+VWS+AWNPT+       +LASCSGDKTVRIWQ++PS   +  W 
Sbjct: 7    GLELKEIQRLEGHNDKVWSLAWNPTS------TLLASCSGDKTVRIWQRSPS---TSSWH 57

Query: 228  CKAILDETHTRTVRSCAWSPSGKLLATASFDATTAIWEQVGDDFECVATLEGHENEVKSV 407
            CKA+L+ETHTRTVRSCAWSPSGKLLATASFDATTAIWE +GDDFECV+TLEGHENEVKSV
Sbjct: 58   CKAVLEETHTRTVRSCAWSPSGKLLATASFDATTAIWELIGDDFECVSTLEGHENEVKSV 117

Query: 408  SWNSSGSLLATCSRDKSVWIWEVLPGNEFDCVSVLTGHTQDVKMVQWHPFMDVLFSCGYD 587
            SWN+SGSLLATCSRDKSVWIWEV PGNEF+CVSVL GHTQDVKMVQWHP MDVLFSC YD
Sbjct: 118  SWNASGSLLATCSRDKSVWIWEVQPGNEFECVSVLQGHTQDVKMVQWHPIMDVLFSCSYD 177

Query: 588  NTIKVWADDRDSDDWECLQTLNEANNGHSSTVWALSFNSAGDKMVTCSDDLTLKIWGTDG 767
            NT+K+WA+D DSDDW C+QTL E+NNGH+STVWALSFN  GDKMVTCSDDLT+KIW TD 
Sbjct: 178  NTVKIWAEDGDSDDWHCVQTLGESNNGHTSTVWALSFNPEGDKMVTCSDDLTVKIWDTDS 237

Query: 768  --PMNGDEFAPWRHLCTLSGVHDRTIFSIHWSREGVIASAAADDAIRLFADESDGSVEGP 941
                 G+ +APW+HLCTLSG HDRTIFS HWSREG+IA+ AADDAIR F +  DG V+GP
Sbjct: 238  ITMQAGEGYAPWKHLCTLSGYHDRTIFSAHWSREGIIATGAADDAIRFFVESKDGLVDGP 297

Query: 942  SYKMLLKKEKAHDMDVNAVQWSSKENRLLASASDDGTIKIWELTSL 1079
             YK++LKKE+AHDMD+N+VQWSS ENRLLASASDDGTIKIWEL S+
Sbjct: 298  LYKLMLKKEQAHDMDINSVQWSSGENRLLASASDDGTIKIWELASI 343


>ref|XP_003625815.1| hypothetical protein MTR_7g104550 [Medicago truncatula]
            gi|355500830|gb|AES82033.1| hypothetical protein
            MTR_7g104550 [Medicago truncatula]
          Length = 344

 Score =  566 bits (1459), Expect = e-159
 Identities = 263/344 (76%), Positives = 297/344 (86%), Gaps = 2/344 (0%)
 Frame = +3

Query: 51   LSLNEVQKLEGHTDRVWSVAWNPTTGYAGIPAMLASCSGDKTVRIWQQNPSDKLSDPWLC 230
            L L EVQKLEGHTDRVWS+ WNP TG+AGIP + ASCSGDKTVRIW+QN S  L   + C
Sbjct: 4    LELKEVQKLEGHTDRVWSLDWNPATGHAGIPLVFASCSGDKTVRIWEQNLSTNL---FSC 60

Query: 231  KAILDETHTRTVRSCAWSPSGKLLATASFDATTAIWEQVGDDFECVATLEGHENEVKSVS 410
            KA L+ETHTRTVRSCAWSPSGKLLATASFDATTAIWE VG +FECV+TLEGHENEVKSVS
Sbjct: 61   KATLEETHTRTVRSCAWSPSGKLLATASFDATTAIWENVGGEFECVSTLEGHENEVKSVS 120

Query: 411  WNSSGSLLATCSRDKSVWIWEVLPGNEFDCVSVLTGHTQDVKMVQWHPFMDVLFSCGYDN 590
            WN+SG+LLATCSRDKSVWIWEV PGNEF+CVSVL GHTQDVKMV+WHP  D+LFSC YDN
Sbjct: 121  WNASGTLLATCSRDKSVWIWEVQPGNEFECVSVLQGHTQDVKMVRWHPTEDILFSCSYDN 180

Query: 591  TIKVWADDRDSDDWECLQTLNEANNGHSSTVWALSFNSAGDKMVTCSDDLTLKIWGTD-- 764
             IKVWAD+ DSDDW+C+QTL E NNGH+STVWALSFN++GDKMVTCSDDLTLK+W T+  
Sbjct: 181  NIKVWADEGDSDDWQCVQTLGEPNNGHTSTVWALSFNASGDKMVTCSDDLTLKVWETEHV 240

Query: 765  GPMNGDEFAPWRHLCTLSGVHDRTIFSIHWSREGVIASAAADDAIRLFADESDGSVEGPS 944
            G  +G  FAPWRH+CTL+G HDRTIFS+HWSR G+ AS AADDAIRLF + ++  V+GP 
Sbjct: 241  GMQSGGGFAPWRHVCTLTGYHDRTIFSVHWSRGGIFASGAADDAIRLFVENNESQVDGPL 300

Query: 945  YKMLLKKEKAHDMDVNAVQWSSKENRLLASASDDGTIKIWELTS 1076
            YK+LLKKEKAHDMD+N VQWS  E  LLASASDDGTIK+W+L S
Sbjct: 301  YKLLLKKEKAHDMDINYVQWSHGEKPLLASASDDGTIKVWDLVS 344


>ref|XP_002528743.1| WD-repeat protein, putative [Ricinus communis]
            gi|223531837|gb|EEF33655.1| WD-repeat protein, putative
            [Ricinus communis]
          Length = 349

 Score =  562 bits (1448), Expect = e-158
 Identities = 264/343 (76%), Positives = 296/343 (86%), Gaps = 2/343 (0%)
 Frame = +3

Query: 57   LNEVQKLEGHTDRVWSVAWNPTTGYAGIPAMLASCSGDKTVRIWQQNPSDKLSDPWLCKA 236
            L E+QKL GHTDRVWS+AWNP T + G PA+ ASCSGDKTVRIW+Q+PS    D   CKA
Sbjct: 10   LKEIQKLHGHTDRVWSLAWNPATRFGGAPAVFASCSGDKTVRIWEQSPSSCSFD---CKA 66

Query: 237  ILDETHTRTVRSCAWSPSGKLLATASFDATTAIWEQVGDDFECVATLEGHENEVKSVSWN 416
            +L+ETHTRTVRSCAWSPSGKLLATASFDATTAIWE +G DFECV+TLEGHENEVKSVSWN
Sbjct: 67   VLEETHTRTVRSCAWSPSGKLLATASFDATTAIWENIGGDFECVSTLEGHENEVKSVSWN 126

Query: 417  SSGSLLATCSRDKSVWIWEVLPGNEFDCVSVLTGHTQDVKMVQWHPFMDVLFSCGYDNTI 596
            +SGSLLATCSRDK+VWIWEV+PGNEF+C SVL GHTQDVKMV+WHP +DVLFSC YDNTI
Sbjct: 127  ASGSLLATCSRDKTVWIWEVMPGNEFECASVLQGHTQDVKMVKWHPNIDVLFSCSYDNTI 186

Query: 597  KVWADDRDSDDWECLQTLNEANNGHSSTVWALSFNSAGDKMVTCSDDLTLKIWGTD-GPM 773
            KVWA+D D  DW C+QTL E+NNGH+STVWALSFN+ GDKMVTCSDDLTLKIW TD G M
Sbjct: 187  KVWAEDGDG-DWHCVQTLGESNNGHTSTVWALSFNAEGDKMVTCSDDLTLKIWETDIGRM 245

Query: 774  -NGDEFAPWRHLCTLSGVHDRTIFSIHWSREGVIASAAADDAIRLFADESDGSVEGPSYK 950
             +GD+ A W H+CTLSG HDRTIFS HWSREG+IAS AADD IR F +  D  V GPSY+
Sbjct: 246  VSGDDHASWNHVCTLSGYHDRTIFSAHWSREGIIASGAADDGIRFFVESKDDLVNGPSYR 305

Query: 951  MLLKKEKAHDMDVNAVQWSSKENRLLASASDDGTIKIWELTSL 1079
            +LLKKEKAHDMD+N+VQW+  ENRLLASASDDGTIKIWEL +L
Sbjct: 306  LLLKKEKAHDMDINSVQWAPGENRLLASASDDGTIKIWELATL 348


>ref|NP_001242180.1| uncharacterized protein LOC100778826 [Glycine max]
            gi|255637044|gb|ACU18854.1| unknown [Glycine max]
          Length = 352

 Score =  556 bits (1433), Expect = e-156
 Identities = 255/336 (75%), Positives = 292/336 (86%), Gaps = 2/336 (0%)
 Frame = +3

Query: 51   LSLNEVQKLEGHTDRVWSVAWNPTTGYAGIPAMLASCSGDKTVRIWQQNPSDKLSDPWLC 230
            + L  +Q+LEGHTD+VWS+AWNPTTG+AGIP + ASCSGDKTVRIW+QN S  L   W C
Sbjct: 2    MELKGIQRLEGHTDKVWSLAWNPTTGHAGIPLVFASCSGDKTVRIWEQNLSSGL---WAC 58

Query: 231  KAILDETHTRTVRSCAWSPSGKLLATASFDATTAIWEQVGDDFECVATLEGHENEVKSVS 410
             A+LDETHTRTVRSCAWSPSGKLLATASFDATTAIWE VG DFECV+TLEGHENEVK VS
Sbjct: 59   TAVLDETHTRTVRSCAWSPSGKLLATASFDATTAIWENVGGDFECVSTLEGHENEVKCVS 118

Query: 411  WNSSGSLLATCSRDKSVWIWEVLPGNEFDCVSVLTGHTQDVKMVQWHPFMDVLFSCGYDN 590
            WN++G+LLATCSRDKSVWIWEVLPGNEF+CVSVL GH+QDVKMV+WHP  D+LFSC YDN
Sbjct: 119  WNAAGTLLATCSRDKSVWIWEVLPGNEFECVSVLQGHSQDVKMVKWHPTEDILFSCSYDN 178

Query: 591  TIKVWADDRDSDDWECLQTLNEANNGHSSTVWALSFNSAGDKMVTCSDDLTLKIWGTD-- 764
            ++KVWAD+ DSDDW+C+QTL E NNGH+STVWALSFN +GDKMVTCSDDLTLK+W T+  
Sbjct: 179  SVKVWADEGDSDDWQCVQTLGEPNNGHTSTVWALSFNVSGDKMVTCSDDLTLKVWETESV 238

Query: 765  GPMNGDEFAPWRHLCTLSGVHDRTIFSIHWSREGVIASAAADDAIRLFADESDGSVEGPS 944
            G  +G  FAPW HLCTLSG HDRTIFS+HWSREG+ AS AAD+AIRLF D+++  V GP 
Sbjct: 239  GTQSGGGFAPWTHLCTLSGYHDRTIFSVHWSREGIFASGAADNAIRLFVDDNESQVGGPL 298

Query: 945  YKMLLKKEKAHDMDVNAVQWSSKENRLLASASDDGT 1052
            YK+LLKKEKAHDMD+N+VQWS  E  +LASASDDGT
Sbjct: 299  YKLLLKKEKAHDMDINSVQWSPGEKPVLASASDDGT 334



 Score =  106 bits (265), Expect = 1e-20
 Identities = 75/247 (30%), Positives = 131/247 (53%), Gaps = 9/247 (3%)
 Frame = +3

Query: 366  VATLEGHENEVKSVSWNSSGS------LLATCSRDKSVWIWEV-LPGNEFDCVSVLTG-H 521
            +  LEGH ++V S++WN +        + A+CS DK+V IWE  L    + C +VL   H
Sbjct: 7    IQRLEGHTDKVWSLAWNPTTGHAGIPLVFASCSGDKTVRIWEQNLSSGLWACTAVLDETH 66

Query: 522  TQDVKMVQWHPFMDVLFSCGYDNTIKVWADDRDSDDWECLQTLNEANNGHSSTVWALSFN 701
            T+ V+   W P   +L +  +D T  +W  +    D+EC+ TL     GH + V  +S+N
Sbjct: 67   TRTVRSCAWSPSGKLLATASFDATTAIW--ENVGGDFECVSTLE----GHENEVKCVSWN 120

Query: 702  SAGDKMVTCSDDLTLKIWGTDGPMNGDEFAPWRHLCTLSGVHDRTIFSIHWS-REGVIAS 878
            +AG  + TCS D ++ IW     + G+EF     +  L G H + +  + W   E ++ S
Sbjct: 121  AAGTLLATCSRDKSVWIWEV---LPGNEF---ECVSVLQG-HSQDVKMVKWHPTEDILFS 173

Query: 879  AAADDAIRLFADESDGSVEGPSYKMLLKKEKAHDMDVNAVQWSSKENRLLASASDDGTIK 1058
             + D++++++ADE D S +    + L +    H   V A+ ++   ++++ + SDD T+K
Sbjct: 174  CSYDNSVKVWADEGD-SDDWQCVQTLGEPNNGHTSTVWALSFNVSGDKMV-TCSDDLTLK 231

Query: 1059 IWELTSL 1079
            +WE  S+
Sbjct: 232  VWETESV 238


>ref|XP_004149209.1| PREDICTED: probable cytosolic iron-sulfur protein assembly
            protein-like [Cucumis sativus]
            gi|449500925|ref|XP_004161232.1| PREDICTED: probable
            cytosolic iron-sulfur protein assembly protein-like
            [Cucumis sativus]
          Length = 350

 Score =  552 bits (1423), Expect = e-155
 Identities = 253/343 (73%), Positives = 292/343 (85%), Gaps = 2/343 (0%)
 Frame = +3

Query: 57   LNEVQKLEGHTDRVWSVAWNPTTGYAGIPAMLASCSGDKTVRIWQQNPSDKLSDPWLCKA 236
            L E+ KLEGHTDRVWS+AWNP TG  GIP + ASCSGDKTVRIW+Q+PS   S  W CKA
Sbjct: 10   LKEIAKLEGHTDRVWSLAWNPATGVGGIPLVFASCSGDKTVRIWEQSPS---SGSWNCKA 66

Query: 237  ILDETHTRTVRSCAWSPSGKLLATASFDATTAIWEQVGDDFECVATLEGHENEVKSVSWN 416
            +L+ETHTRTVRSCAWSP+GKLLATASFDATTAIWE  G D+ECV+TLEGHENE+KSV+WN
Sbjct: 67   VLEETHTRTVRSCAWSPNGKLLATASFDATTAIWENTGGDYECVSTLEGHENEIKSVAWN 126

Query: 417  SSGSLLATCSRDKSVWIWEVLPGNEFDCVSVLTGHTQDVKMVQWHPFMDVLFSCGYDNTI 596
            +SGSLLATCSRD++VWIWEVLPGNE++CVSVL GHTQDVKMVQWHP MD+LFSC YDNT+
Sbjct: 127  ASGSLLATCSRDRTVWIWEVLPGNEYECVSVLQGHTQDVKMVQWHPTMDLLFSCSYDNTV 186

Query: 597  KVWADDRDSDDWECLQTLNEANNGHSSTVWALSFNSAGDKMVTCSDDLTLKIWGTDGPMN 776
            KVWA D D+DDW C+QTL+E+NNGHSSTVWALSFN+ GDKMV+CSDDLTLKIW TD    
Sbjct: 187  KVWAGDDDNDDWHCVQTLDESNNGHSSTVWALSFNATGDKMVSCSDDLTLKIWETDETKL 246

Query: 777  GDE--FAPWRHLCTLSGVHDRTIFSIHWSREGVIASAAADDAIRLFADESDGSVEGPSYK 950
              E  ++PWRH CTLSG HDRTIFS+HWSR G+IAS AADDAIRLF +  +  ++  S++
Sbjct: 247  HSEAGYSPWRHTCTLSGYHDRTIFSVHWSRNGIIASGAADDAIRLFVENQEKGIDRSSFQ 306

Query: 951  MLLKKEKAHDMDVNAVQWSSKENRLLASASDDGTIKIWELTSL 1079
            +L KKEKAH MDVN+VQWS  E  LLASASDDGTI+IWEL  +
Sbjct: 307  LLFKKEKAHSMDVNSVQWSPGEKVLLASASDDGTIRIWELVPI 349