BLASTX nr result

ID: Coptis24_contig00008189 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00008189
         (1897 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285069.1| PREDICTED: nudix hydrolase 19, chloroplastic...   594   e-167
ref|XP_002524460.1| mutt/nudix hydrolase, putative [Ricinus comm...   585   e-164
ref|XP_004139323.1| PREDICTED: nudix hydrolase 19, chloroplastic...   584   e-164
ref|XP_002308309.1| predicted protein [Populus trichocarpa] gi|2...   573   e-161
ref|XP_002330502.1| predicted protein [Populus trichocarpa] gi|2...   570   e-160

>ref|XP_002285069.1| PREDICTED: nudix hydrolase 19, chloroplastic-like [Vitis vinifera]
          Length = 441

 Score =  594 bits (1531), Expect = e-167
 Identities = 298/420 (70%), Positives = 340/420 (80%), Gaps = 9/420 (2%)
 Frame = +1

Query: 79   SFSSKTQVKFSAMSIINSELHAFAGNPLKFKSSKPSNDLFSPISALESLKNQLLNNTQQP 258
            + ++KT     +    N + HAFAGNPL+  + KP + LFSPISA E+LK++LL N   P
Sbjct: 24   TLTTKTLSHLHSTMSTNLKTHAFAGNPLRSTTPKPES-LFSPISAFETLKSRLLENALLP 82

Query: 259  PSPSFKVLPFKKGRPLATS------AATFWHLGWISLADCKAILLDKYENLSENCFVYLG 420
             SP FKVLPF+KGRPLA S      +   WHLGW +L D K  L +     +EN FVYLG
Sbjct: 83   SSPIFKVLPFRKGRPLAISTRPTGDSPPIWHLGWFNLGDFKGFLANSEFQPTENSFVYLG 142

Query: 421  SDESEDVVYWGIDIVGEDGNR--ELRERGLCFVELRTLMVATDWTDSRAMGDLAIAGHAR 594
            S   +DVVYWGID V ED +   +   +   FVELRTLMVATDWTD RAM DLAIAGHAR
Sbjct: 143  SRSEDDVVYWGID-VSEDSSLVPQFGAKHFGFVELRTLMVATDWTDERAMSDLAIAGHAR 201

Query: 595  ALLEWHNVSRFCGHCGEKTVPIDAGRRKQCSNEECKKRIYPRVDPVVIMLVIDRENDRAL 774
            ALLEWHN+S FCGHCGEKTVP++AGRRKQCSN  CKKRIYPRVDPVVIMLVIDRENDRAL
Sbjct: 202  ALLEWHNISHFCGHCGEKTVPMEAGRRKQCSNALCKKRIYPRVDPVVIMLVIDRENDRAL 261

Query: 775  LSRQSRFVPRMWSCLAGFIEPGESLEEAVRRETWEETGIEVGDVVYHSSQPWPVGPSSMP 954
            LSRQSRFVPRMWSCLAGFIEPGESLEEAVRRETWEETG+EVG+V+YHSSQPWPVGP+SMP
Sbjct: 262  LSRQSRFVPRMWSCLAGFIEPGESLEEAVRRETWEETGVEVGEVIYHSSQPWPVGPNSMP 321

Query: 955  CQLMVGFFAYAKSLEIHVDKVELEDAQWHSREDVRKALTFGEYDKAQKTASAKVDQMCKG 1134
            CQLM+GFFAYAKS+EI+VDK ELEDAQWHSREDV+KALTF EY KAQ+TA+AKV+QMCKG
Sbjct: 322  CQLMMGFFAYAKSVEINVDKEELEDAQWHSREDVKKALTFAEYKKAQRTAAAKVEQMCKG 381

Query: 1135 VEKGQNFSSDFNVESGELAPMFVPGPFAIAHYLISSWVNQESDHGTGVPAREPS-SMSSL 1311
            VEKGQN S+DFNVESGELA MF+PGPFAIAH+LISSWVNQ   +G     ++PS S+S+L
Sbjct: 382  VEKGQNLSADFNVESGELATMFIPGPFAIAHHLISSWVNQVPLNGVEAQLKQPSGSLSNL 441


>ref|XP_002524460.1| mutt/nudix hydrolase, putative [Ricinus communis]
            gi|223536248|gb|EEF37900.1| mutt/nudix hydrolase,
            putative [Ricinus communis]
          Length = 400

 Score =  585 bits (1509), Expect = e-164
 Identities = 298/405 (73%), Positives = 329/405 (81%), Gaps = 9/405 (2%)
 Frame = +1

Query: 124  INSELHAFAGNPLKFKSSKPSNDLFSPISALESLKNQLLN-NTQQPPSPSFKVLPFKKGR 300
            IN   HAFAGNPL  K+ KP++ L SP  ALE+LK+Q L+ N+ Q  S +FKVLPF+KGR
Sbjct: 3    INLRTHAFAGNPLLSKTLKPTDPL-SPNLALETLKSQFLDGNSHQLSSVNFKVLPFRKGR 61

Query: 301  PLATSA-------ATFWHLGWISLADCKAILLDKYENLSENCFVYLGSDESEDVVYWGID 459
            PLA+S+          WHLGWISLADCK +L +    LS    VYLGS   +DVVYW +D
Sbjct: 62   PLASSSIGDNDDLVPNWHLGWISLADCKTLLDNSGVELSGESLVYLGSKSEDDVVYWAVD 121

Query: 460  IVGEDGN-RELRERGLCFVELRTLMVATDWTDSRAMGDLAIAGHARALLEWHNVSRFCGH 636
            + GE     E   +  CFVELRTLMVATDW + RAM DLAIAGHARALLEWH +S FCG 
Sbjct: 122  VSGEGSLVTEFGSKQFCFVELRTLMVATDWANERAMSDLAIAGHARALLEWHKISNFCGQ 181

Query: 637  CGEKTVPIDAGRRKQCSNEECKKRIYPRVDPVVIMLVIDRENDRALLSRQSRFVPRMWSC 816
            CGEKTVP +AGRRKQCSNE CKKRIYPRVDPVVIMLVIDREND  LLSRQSR+VPRMWSC
Sbjct: 182  CGEKTVPKEAGRRKQCSNELCKKRIYPRVDPVVIMLVIDRENDCVLLSRQSRYVPRMWSC 241

Query: 817  LAGFIEPGESLEEAVRRETWEETGIEVGDVVYHSSQPWPVGPSSMPCQLMVGFFAYAKSL 996
            LAGFIEPGESLEEAVRRETWEETGIEVG+VVYHSSQPWPVGPSSMPCQLMVGFFAYAKSL
Sbjct: 242  LAGFIEPGESLEEAVRRETWEETGIEVGEVVYHSSQPWPVGPSSMPCQLMVGFFAYAKSL 301

Query: 997  EIHVDKVELEDAQWHSREDVRKALTFGEYDKAQKTASAKVDQMCKGVEKGQNFSSDFNVE 1176
            EI+VDK ELEDA+WHSREDV+KAL F EYDKAQ+TA+AKVDQMCKGVEKGQNFS+DFNVE
Sbjct: 302  EINVDKAELEDAKWHSREDVQKALAFAEYDKAQRTAAAKVDQMCKGVEKGQNFSADFNVE 361

Query: 1177 SGELAPMFVPGPFAIAHYLISSWVNQESDHGTGVPAREPSSMSSL 1311
            SGELAPMF PGPFAIAH+LISSWVNQ S  G        SS+S+L
Sbjct: 362  SGELAPMFFPGPFAIAHHLISSWVNQSSKSGVS------SSISNL 400


>ref|XP_004139323.1| PREDICTED: nudix hydrolase 19, chloroplastic-like [Cucumis sativus]
            gi|449520651|ref|XP_004167347.1| PREDICTED: nudix
            hydrolase 19, chloroplastic-like [Cucumis sativus]
          Length = 441

 Score =  584 bits (1505), Expect = e-164
 Identities = 296/421 (70%), Positives = 346/421 (82%), Gaps = 7/421 (1%)
 Frame = +1

Query: 70   SSLSFSSKTQVKFSAMSIINSELHAFAGNPLKFKSSKPSNDLFSPISALESLKNQLLNNT 249
            SS S SS T +   ++S+ NS  HAFAGNP+K K+ KP N  FS  SALESL +QLLNNT
Sbjct: 27   SSSSISSSTSIPTMSISL-NS--HAFAGNPIKLKTPKPENP-FSASSALESLNSQLLNNT 82

Query: 250  QQPPSPSFKVLPFKKGRPLATSAA------TFWHLGWISLADCKAILLDKYENLSENCFV 411
                S +FKVLPFKKG+PLAT +A      + WHLGWI L D KA+  +    L+ + FV
Sbjct: 83   HFSSSINFKVLPFKKGKPLATFSARPNDTSSTWHLGWIDLTDFKALFANSTLELTGDLFV 142

Query: 412  YLGSDESEDVVYWGIDIVGEDGN-RELRERGLCFVELRTLMVATDWTDSRAMGDLAIAGH 588
            YLG  + E+ VYWGID+  E+    E   + LCFVE+RTLMVA+DW D+RAMG+LAIAGH
Sbjct: 143  YLGYLDEENSVYWGIDVSSEEVLVSEFASKSLCFVEVRTLMVASDWADARAMGELAIAGH 202

Query: 589  ARALLEWHNVSRFCGHCGEKTVPIDAGRRKQCSNEECKKRIYPRVDPVVIMLVIDRENDR 768
            ARALLEWHNVS+FCGHCG KTVP++AG+RKQCSN  CKK++YPRVDPVVIMLVIDRENDR
Sbjct: 203  ARALLEWHNVSKFCGHCGGKTVPVEAGKRKQCSNPSCKKKVYPRVDPVVIMLVIDRENDR 262

Query: 769  ALLSRQSRFVPRMWSCLAGFIEPGESLEEAVRRETWEETGIEVGDVVYHSSQPWPVGPSS 948
            ALLS+QSRFVPRMWSCLAGFIEPGESLEEAV+RETWEETGIEVG+VVYHSSQPWPVGPS+
Sbjct: 263  ALLSKQSRFVPRMWSCLAGFIEPGESLEEAVKRETWEETGIEVGEVVYHSSQPWPVGPSN 322

Query: 949  MPCQLMVGFFAYAKSLEIHVDKVELEDAQWHSREDVRKALTFGEYDKAQKTASAKVDQMC 1128
            MPCQLMVGFFAYAKS +I+VDK ELEDA+WHSREDVR ALTF EY+KAQ+TA+AKV+QMC
Sbjct: 323  MPCQLMVGFFAYAKSFDINVDKGELEDARWHSREDVRNALTFAEYEKAQRTAAAKVEQMC 382

Query: 1129 KGVEKGQNFSSDFNVESGELAPMFVPGPFAIAHYLISSWVNQESDHGTGVPAREPSSMSS 1308
            KGVE+ Q+ SSDFNVESGELAPMFVPGPFAIAH+LISSWV  E   G+G+  ++ +S S+
Sbjct: 383  KGVERQQSLSSDFNVESGELAPMFVPGPFAIAHHLISSWVYNEGS-GSGL-NKDRNSFSN 440

Query: 1309 L 1311
            L
Sbjct: 441  L 441


>ref|XP_002308309.1| predicted protein [Populus trichocarpa] gi|222854285|gb|EEE91832.1|
            predicted protein [Populus trichocarpa]
          Length = 395

 Score =  573 bits (1478), Expect = e-161
 Identities = 281/388 (72%), Positives = 324/388 (83%), Gaps = 9/388 (2%)
 Frame = +1

Query: 124  INSELHAFAGNPLKFKSSKPSNDLFSPISALESLKNQLLNNTQQPPSPSFKVLPFKKGRP 303
            I+ + HAFAGNPL+ K+ +P++ L SP  ALE+LK QL++N+ Q  S +FKVLPF+KGRP
Sbjct: 3    ISLQSHAFAGNPLRSKTPQPTHPL-SPALALETLKTQLVDNSHQSSSLNFKVLPFRKGRP 61

Query: 304  LATSAAT------FWHLGWISLADCKAILLDKYENLSENCFVYLGSDESEDV--VYWGID 459
            LA+S +T       WHLGWISLADCK +        + +   YLGS   +DV  VYW ID
Sbjct: 62   LASSTSTDADLGPTWHLGWISLADCKGLFSASGVEFTGDSLFYLGSSSEQDVDVVYWAID 121

Query: 460  IVGEDGN-RELRERGLCFVELRTLMVATDWTDSRAMGDLAIAGHARALLEWHNVSRFCGH 636
            + GE+    E     +CF+ELRTLMVATDW D +AM DLA+AGHA+ALLEWHN+SRFCG+
Sbjct: 122  VSGENSLFTEFDSEQVCFIELRTLMVATDWADKQAMVDLAVAGHAKALLEWHNISRFCGY 181

Query: 637  CGEKTVPIDAGRRKQCSNEECKKRIYPRVDPVVIMLVIDRENDRALLSRQSRFVPRMWSC 816
            CGEKTVP+++GRRKQCSNE C++++YPRVDPVVIMLVIDRENDRALL RQSRFVPRMWSC
Sbjct: 182  CGEKTVPMESGRRKQCSNELCRRKVYPRVDPVVIMLVIDRENDRALLGRQSRFVPRMWSC 241

Query: 817  LAGFIEPGESLEEAVRRETWEETGIEVGDVVYHSSQPWPVGPSSMPCQLMVGFFAYAKSL 996
            LAGFIEPGESLEEAVRRETWEET IEVG+V+YHSSQPWPVGPSSMPCQLMVGFFAYAKSL
Sbjct: 242  LAGFIEPGESLEEAVRRETWEETAIEVGEVMYHSSQPWPVGPSSMPCQLMVGFFAYAKSL 301

Query: 997  EIHVDKVELEDAQWHSREDVRKALTFGEYDKAQKTASAKVDQMCKGVEKGQNFSSDFNVE 1176
            EI VDK ELEDAQWHSREDVRKAL F EY+KAQ+TA+AKVDQMC+GVEKGQ+ SSDFNVE
Sbjct: 302  EIKVDKAELEDAQWHSREDVRKALMFAEYEKAQRTAAAKVDQMCRGVEKGQSLSSDFNVE 361

Query: 1177 SGELAPMFVPGPFAIAHYLISSWVNQES 1260
            SGELAPMF PGPFAIAH LI+SWVNQ S
Sbjct: 362  SGELAPMFFPGPFAIAHRLITSWVNQGS 389


>ref|XP_002330502.1| predicted protein [Populus trichocarpa] gi|222872436|gb|EEF09567.1|
            predicted protein [Populus trichocarpa]
          Length = 414

 Score =  570 bits (1470), Expect = e-160
 Identities = 281/398 (70%), Positives = 324/398 (81%), Gaps = 7/398 (1%)
 Frame = +1

Query: 127  NSELHAFAGNPLKFKSSKPSNDLFSPISALESLKNQLLNNTQQPPSPSFKVLPFKKGRPL 306
            N + HAFAGNPL+ K+ K S D  SP  A E+LK QLL NT Q  S +FKVLPF+KGRPL
Sbjct: 4    NLQSHAFAGNPLRSKTPK-STDPLSPPLAFETLKTQLLGNTHQLSSLNFKVLPFRKGRPL 62

Query: 307  ATSAATF------WHLGWISLADCKAILLDKYENLSENCFVYLGSDESEDVVYWGIDIVG 468
            A+S++T       WHLGWISL DCK +     + LS +  VYLGS   EDVVYW I++ G
Sbjct: 63   ASSSSTDGDLGPKWHLGWISLDDCKGLFSGSGDELSGDNMVYLGSRSEEDVVYWAINVSG 122

Query: 469  EDGN-RELRERGLCFVELRTLMVATDWTDSRAMGDLAIAGHARALLEWHNVSRFCGHCGE 645
            E+    +   +  CFVELRTLMVATDW D RAM DLA+AGHA+ALLEWHN+SRFCG+CGE
Sbjct: 123  ENSLVTDSVSKQFCFVELRTLMVATDWADERAMSDLAVAGHAKALLEWHNISRFCGYCGE 182

Query: 646  KTVPIDAGRRKQCSNEECKKRIYPRVDPVVIMLVIDRENDRALLSRQSRFVPRMWSCLAG 825
            KT+ +++GRRKQCSNE C+++IYPRVDPVVIMLVIDRENDR LL RQSRFVPRMWSCLAG
Sbjct: 183  KTITMESGRRKQCSNELCRRKIYPRVDPVVIMLVIDRENDRVLLGRQSRFVPRMWSCLAG 242

Query: 826  FIEPGESLEEAVRRETWEETGIEVGDVVYHSSQPWPVGPSSMPCQLMVGFFAYAKSLEIH 1005
            FIEPGESLEEAVRRETWEET IEVG+V+YHSSQPWPVGPSSMPCQLMVGFFAYAKS EI+
Sbjct: 243  FIEPGESLEEAVRRETWEETAIEVGEVMYHSSQPWPVGPSSMPCQLMVGFFAYAKSFEIN 302

Query: 1006 VDKVELEDAQWHSREDVRKALTFGEYDKAQKTASAKVDQMCKGVEKGQNFSSDFNVESGE 1185
            VDK ELEDAQWHSREDVRKAL   EY KAQ+TA+AKV+QMCKG+E+GQ+FSSDFN+ESGE
Sbjct: 303  VDKEELEDAQWHSREDVRKALLCAEYKKAQRTAAAKVEQMCKGIERGQSFSSDFNLESGE 362

Query: 1186 LAPMFVPGPFAIAHYLISSWVNQESDHGTGVPAREPSS 1299
            LAPMF PGP+AIAH+LI+SW NQ    G+   A +P S
Sbjct: 363  LAPMFFPGPYAIAHHLITSWANQ----GSAFDAEDPDS 396


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