BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00008078
         (1054 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268514.1| PREDICTED: uncharacterized protein LOC100245...   168   2e-39
ref|XP_002278038.2| PREDICTED: uncharacterized protein LOC100244...   156   7e-36
emb|CAN74734.1| hypothetical protein VITISV_044234 [Vitis vinifera]   155   1e-35
ref|XP_002512799.1| pentatricopeptide repeat-containing protein,...   153   6e-35
ref|XP_002297893.1| predicted protein [Populus trichocarpa] gi|2...   152   2e-34

>ref|XP_002268514.1| PREDICTED: uncharacterized protein LOC100245456 [Vitis vinifera]
          Length = 292

 Score =  168 bits (425), Expect = 2e-39
 Identities = 105/269 (39%), Positives = 143/269 (53%), Gaps = 34/269 (12%)
 Frame = -1

Query: 922 SMEVKVMCCKDIKAFNFFQKLSIYSSVSIVSTRKETSKTQTPPQ---RHKTPIDREGKEN 752
           SME+KV+ CK +KAFNFFQKL +Y+ VSI+S   + S  +   Q   R KTP+DR+G  N
Sbjct: 6   SMELKVISCKHLKAFNFFQKLVVYAVVSIISDESKNSNQKHQIQCLQRQKTPVDRDGNGN 65

Query: 751 PEWNHLIQLDLSALHLDNQHDLFLEFDMLCDSAIFGDKSIGQVRVPIKELIEECNGTVRY 572
           PEWNH +Q DL  + L +  + +++F + C+  +FG+K+IG+V VP+KELI+E N  VR+
Sbjct: 66  PEWNHQLQFDLRDISLADSANYYVKFSLRCEGIVFGNKTIGEVCVPLKELIDEFNRAVRF 125

Query: 571 VSYQVMTTDGKPNGVLDFSYKVIDDQFNKIGS-------------LYPEIESIAFH---Q 440
           VSYQV TTDGKPNGVL+FSYK+     N  GS              YP +E   FH   +
Sbjct: 126 VSYQVRTTDGKPNGVLNFSYKL-----NIKGSDLPAVEAPEDEHLPYPSVEVEEFHAPKK 180

Query: 439 XXXXXXXXXXXXXXXXPSTGVFYPQ---------PLP------ETPHFVQAEFYYPPSAP 305
                            ST    P+         PLP        P  +   +Y+P   P
Sbjct: 181 DSCYPSVDVSTLPAISISTPYHTPEFHNMGPPQLPLPPPPPPAAVPMMMAGAYYHPLPCP 240

Query: 304 LVYGAPTGPYGYPVGNYSYPVCGYPTNDG 218
           LVY +   PY      Y + +C YP+  G
Sbjct: 241 LVYASQ--PY------YDHGLCRYPSAAG 261


>ref|XP_002278038.2| PREDICTED: uncharacterized protein LOC100244618 [Vitis vinifera]
          Length = 1154

 Score =  156 bits (395), Expect = 7e-36
 Identities = 103/279 (36%), Positives = 141/279 (50%), Gaps = 32/279 (11%)
 Frame = -1

Query: 976  ILTFTSQQERNSTIMAPTSMEVKVMCCKDIKAFNFFQKLSIYSSVSIVSTRKETSKTQTP 797
            +L+  S   RNS       ++VKVM CKD++AFNFFQKLS+Y+ VS+VS   +       
Sbjct: 876  LLSMESNTSRNS-------IQVKVMSCKDLRAFNFFQKLSVYAIVSLVSDDPDQKLEPHH 928

Query: 796  PQRHKTPIDREGKENPEWNHLIQLDLSALHLDNQHDLFLEFDMLCDSAIF--GDKSIGQV 623
             Q+ +TP D+EG  NPEWNHL++ +L  +     H LF+ FD+ C+  +F  GDK++G+V
Sbjct: 929  QQQQRTPADKEGDGNPEWNHLMEFNL--IEGFGLHHLFIHFDLRCEGLVFGIGDKALGEV 986

Query: 622  RVPIKELIE-ECNGTVRYVSYQVMTTDGKPNGVLDFSYKVIDDQFNK-----IGSLYPEI 461
            RVP+ +LI+ + NG +R+VSYQV + DGKPNGVL+FSYK + ++  K       S  P  
Sbjct: 987  RVPLDDLIQPDSNGIMRFVSYQVRSGDGKPNGVLNFSYKAVMNEMGKKEEMGCSSPSPAN 1046

Query: 460  ESIAF---HQXXXXXXXXXXXXXXXXPSTGV---------------------FYPQPLPE 353
            E   F   HQ                PS                        +YP P P 
Sbjct: 1047 EITGFPIRHQPTTPPPTLYPTLELEIPSPSTPQQIQYTSPGTGSMQHPPHQPYYPPPPPP 1106

Query: 352  TPHFVQAEFYYPPSAPLVYGAPTGPYGYPVGNYSYPVCG 236
             P       YYPP  PL    P  P   P+  Y +P  G
Sbjct: 1107 PPG------YYPPPPPLHPPPPLFPPPPPLPYYQHPPHG 1139


>emb|CAN74734.1| hypothetical protein VITISV_044234 [Vitis vinifera]
          Length = 276

 Score =  155 bits (393), Expect = 1e-35
 Identities = 99/261 (37%), Positives = 135/261 (51%), Gaps = 32/261 (12%)
 Frame = -1

Query: 922 SMEVKVMCCKDIKAFNFFQKLSIYSSVSIVSTRKETSKTQTPPQRHKTPIDREGKENPEW 743
           S++VKVM CKD++AFNFFQKLS+Y+ VS+VS   +        Q+ +TP D+EG  NPEW
Sbjct: 9   SIQVKVMSCKDLRAFNFFQKLSVYAIVSLVSDDPDQKLEPHHQQQQRTPADKEGDGNPEW 68

Query: 742 NHLIQLDLSALHLDNQHDLFLEFDMLCDSAIF--GDKSIGQVRVPIKELIE-ECNGTVRY 572
           NHL++ +L  +     H LF+ FD+ C+  +F  GDK++G+VRVP+ +LI+ + NG +R+
Sbjct: 69  NHLMEFNL--IEGFGLHHLFIHFDLRCEGLVFGIGDKALGEVRVPLDDLIQPDSNGIMRF 126

Query: 571 VSYQVMTTDGKPNGVLDFSYKVIDDQFNK-----IGSLYPEIESIAF---HQXXXXXXXX 416
           VSYQV + DGKPNGVL+FSYK + ++  K       S  P  E   F   HQ        
Sbjct: 127 VSYQVRSGDGKPNGVLNFSYKAVMNEMGKKEEMGCSSPSPANEITGFPIRHQPTTPPPTL 186

Query: 415 XXXXXXXXPSTGV---------------------FYPQPLPETPHFVQAEFYYPPSAPLV 299
                   PS                        +YP P P  P       YYPP  PL 
Sbjct: 187 YPTLELEIPSPSTPQQXQYTSPGTGSMQHPPHQPYYPPPPPPPPG------YYPPPPPLH 240

Query: 298 YGAPTGPYGYPVGNYSYPVCG 236
              P  P   P+  Y +P  G
Sbjct: 241 PPPPLFPPPPPLPYYQHPPHG 261


>ref|XP_002512799.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223547810|gb|EEF49302.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 1198

 Score =  153 bits (387), Expect = 6e-35
 Identities = 95/240 (39%), Positives = 130/240 (54%), Gaps = 13/240 (5%)
 Frame = -1

Query: 949  RNSTIMAPTSMEVKVMCCKDIKAFNFFQKLSIYSSVSIVSTRKETSKTQTPPQRHKTPID 770
            +N   M    ME+KVM C D+KAFNFFQKL +Y  VS+VS  ++  K     Q+ +TP D
Sbjct: 886  QNQLPMESKFMELKVMYCNDLKAFNFFQKLLVYVLVSLVS--EDPDKKLKRNQQQRTPTD 943

Query: 769  REGKENPEWNHLIQLDLSALHLDNQHDLFLEFDMLCDSAIFGDKSIGQVRVPIKELIEEC 590
             E   NP WNH ++ DLS +   +   LFL FD+L +   FG+K+IG VRVP+K+LI+E 
Sbjct: 944  TEDDGNPAWNHEMRFDLSEVSFVDCDHLFLHFDLLHEGLYFGNKTIGDVRVPLKDLIQES 1003

Query: 589  NGTVRYVSYQVMTTDGKPNGVLDFSYKVIDDQFNKIGSLYPEIE----SIAFHQXXXXXX 422
            +G  R+V+YQV + +GKPNG+L+FSYKV + Q   +G  +P  E    S+  H       
Sbjct: 1004 SGITRFVNYQVRSPEGKPNGILNFSYKV-NAQGKDMGIHFPTSEITGYSVVVHH---HHE 1059

Query: 421  XXXXXXXXXXPSTGVFYPQPLPETPHFVQAEFYYPPSAPLVYGA---------PTGPYGY 269
                       S  V YP P PE      ++  YPP+A + Y           P  PY Y
Sbjct: 1060 SSDIQNPAESSSPVVHYPPPKPED----SSQETYPPAAEVSYPIQGTQQQSPYPPTPYAY 1115


>ref|XP_002297893.1| predicted protein [Populus trichocarpa] gi|222845151|gb|EEE82698.1|
           predicted protein [Populus trichocarpa]
          Length = 350

 Score =  152 bits (383), Expect = 2e-34
 Identities = 86/210 (40%), Positives = 122/210 (58%), Gaps = 41/210 (19%)
 Frame = -1

Query: 964 TSQQERNSTIMAPTSMEVKVMCCKDIKAFNFFQKLSIYSSVSIVSTRKETSKTQ------ 803
           +S +++    M   S+E+KV+ C+D+KAFNFFQKLS+Y  VS+ +     ++ Q      
Sbjct: 17  SSVEKKAEHTMEGVSLELKVISCRDLKAFNFFQKLSVYVVVSVFNDEPRKNEQQRQKTAV 76

Query: 802 ---------------------TP-------------PQRHKTPIDREGKENPEWNHLIQL 725
                                TP              QR KTP DREG  NPEWNH+++ 
Sbjct: 77  DFLSCVLKKNEKQRQRLQGQKTPLNDEAQKNEQQQLLQRQKTPADREGGSNPEWNHMMEF 136

Query: 724 DLSALHLDNQHD-LFLEFDMLCDSAIFGDKSIGQVRVPIKELIEECNGTVRYVSYQVMTT 548
           DL+   L    D LF +F++ C+ AIFG+KSIG+V VP K+LIEE NG+VR+VSYQV  +
Sbjct: 137 DLNTTSLPGHGDHLFFKFELRCEGAIFGNKSIGEVCVPFKDLIEEFNGSVRFVSYQVRNS 196

Query: 547 DGKPNGVLDFSYKVIDDQFNKIGSLYPEIE 458
           DGKPNGVL+ SY+V +++  K G   P+++
Sbjct: 197 DGKPNGVLNLSYEV-NEKVQKEGIESPKVD 225