BLASTX nr result

ID: Coptis24_contig00008007 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00008007
         (504 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004159946.1| PREDICTED: LOW QUALITY PROTEIN: tyrosine--tR...   189   8e-71
ref|XP_004143904.1| PREDICTED: tyrosine--tRNA ligase-like [Cucum...   189   8e-71
emb|CAA71881.1| Tyrosyl-tRNA synthetase [Nicotiana tabacum]           184   2e-70
ref|XP_002315391.1| predicted protein [Populus trichocarpa] gi|2...   187   4e-70
ref|XP_002274369.1| PREDICTED: tyrosyl-tRNA synthetase [Vitis vi...   190   1e-69

>ref|XP_004159946.1| PREDICTED: LOW QUALITY PROTEIN: tyrosine--tRNA ligase-like [Cucumis
           sativus]
          Length = 387

 Score =  189 bits (479), Expect(2) = 8e-71
 Identities = 89/95 (93%), Positives = 93/95 (97%)
 Frame = -2

Query: 287 DIFFLKADICQLGMDQRKVNVLAREYCDDIKRKNKPIILSHHMLPGLQQGQEKMSKSDPS 108
           DIFFLKADICQLGMDQRKVNVLAREYCDDIKRKNKPIILSHHMLPGLQQGQEKMSKSDPS
Sbjct: 209 DIFFLKADICQLGMDQRKVNVLAREYCDDIKRKNKPIILSHHMLPGLQQGQEKMSKSDPS 268

Query: 107 SSIYMEDEEAEVNVKIKKAYCPPNIVNGNPCLEYV 3
           SSI+MED+EAEVN+KIKKAYCPP IV GNPCLEY+
Sbjct: 269 SSIFMEDDEAEVNLKIKKAYCPPLIVEGNPCLEYI 303



 Score =  103 bits (257), Expect(2) = 8e-71
 Identities = 46/51 (90%), Positives = 49/51 (96%)
 Frame = -1

Query: 504 YWPLVMDIARRNKLPRIVRCCQIMGRNEQDDLSAAQIFYPCMQCADIFFLK 352
           YWPLVMDIARRNKLPRI+RC QIMGRNEQD+L+AAQI YPCMQCADIFFLK
Sbjct: 164 YWPLVMDIARRNKLPRIIRCSQIMGRNEQDELTAAQILYPCMQCADIFFLK 214


>ref|XP_004143904.1| PREDICTED: tyrosine--tRNA ligase-like [Cucumis sativus]
          Length = 387

 Score =  189 bits (479), Expect(2) = 8e-71
 Identities = 89/95 (93%), Positives = 93/95 (97%)
 Frame = -2

Query: 287 DIFFLKADICQLGMDQRKVNVLAREYCDDIKRKNKPIILSHHMLPGLQQGQEKMSKSDPS 108
           DIFFLKADICQLGMDQRKVNVLAREYCDDIKRKNKPIILSHHMLPGLQQGQEKMSKSDPS
Sbjct: 209 DIFFLKADICQLGMDQRKVNVLAREYCDDIKRKNKPIILSHHMLPGLQQGQEKMSKSDPS 268

Query: 107 SSIYMEDEEAEVNVKIKKAYCPPNIVNGNPCLEYV 3
           SSI+MED+EAEVN+KIKKAYCPP IV GNPCLEY+
Sbjct: 269 SSIFMEDDEAEVNLKIKKAYCPPLIVEGNPCLEYI 303



 Score =  103 bits (257), Expect(2) = 8e-71
 Identities = 46/51 (90%), Positives = 49/51 (96%)
 Frame = -1

Query: 504 YWPLVMDIARRNKLPRIVRCCQIMGRNEQDDLSAAQIFYPCMQCADIFFLK 352
           YWPLVMDIARRNKLPRI+RC QIMGRNEQD+L+AAQI YPCMQCADIFFLK
Sbjct: 164 YWPLVMDIARRNKLPRIIRCSQIMGRNEQDELTAAQILYPCMQCADIFFLK 214


>emb|CAA71881.1| Tyrosyl-tRNA synthetase [Nicotiana tabacum]
          Length = 408

 Score =  184 bits (467), Expect(2) = 2e-70
 Identities = 85/95 (89%), Positives = 92/95 (96%)
 Frame = -2

Query: 287 DIFFLKADICQLGMDQRKVNVLAREYCDDIKRKNKPIILSHHMLPGLQQGQEKMSKSDPS 108
           DIFFLKADICQLGMDQRKVNVLAREYCDDI+RKNKPIILSHHMLPGLQ+GQEKMSKSDPS
Sbjct: 230 DIFFLKADICQLGMDQRKVNVLAREYCDDIRRKNKPIILSHHMLPGLQEGQEKMSKSDPS 289

Query: 107 SSIYMEDEEAEVNVKIKKAYCPPNIVNGNPCLEYV 3
           SSIYMEDEEA+VN+KIKKA+CPP +V  NPCLEY+
Sbjct: 290 SSIYMEDEEADVNLKIKKAFCPPKVVEKNPCLEYI 324



 Score =  106 bits (265), Expect(2) = 2e-70
 Identities = 46/51 (90%), Positives = 51/51 (100%)
 Frame = -1

Query: 504 YWPLVMDIARRNKLPRIVRCCQIMGRNEQDDLSAAQIFYPCMQCADIFFLK 352
           YWPLVMD+ARRNKLPRI+RCCQIMGR+EQD+L+AAQIFYPCMQCADIFFLK
Sbjct: 185 YWPLVMDVARRNKLPRILRCCQIMGRSEQDELTAAQIFYPCMQCADIFFLK 235


>ref|XP_002315391.1| predicted protein [Populus trichocarpa] gi|222864431|gb|EEF01562.1|
           predicted protein [Populus trichocarpa]
          Length = 345

 Score =  187 bits (474), Expect(2) = 4e-70
 Identities = 88/95 (92%), Positives = 90/95 (94%)
 Frame = -2

Query: 287 DIFFLKADICQLGMDQRKVNVLAREYCDDIKRKNKPIILSHHMLPGLQQGQEKMSKSDPS 108
           DIFFLKADICQLGMDQRKVNVLAREYCDDIKRKNKPIILSHHMLPGLQQGQEKMSKSDPS
Sbjct: 173 DIFFLKADICQLGMDQRKVNVLAREYCDDIKRKNKPIILSHHMLPGLQQGQEKMSKSDPS 232

Query: 107 SSIYMEDEEAEVNVKIKKAYCPPNIVNGNPCLEYV 3
           SSI+MEDEE EV  KIKKAYCPP IV GNPCLEY+
Sbjct: 233 SSIFMEDEEVEVKTKIKKAYCPPQIVEGNPCLEYI 267



 Score =  103 bits (256), Expect(2) = 4e-70
 Identities = 46/51 (90%), Positives = 50/51 (98%)
 Frame = -1

Query: 504 YWPLVMDIARRNKLPRIVRCCQIMGRNEQDDLSAAQIFYPCMQCADIFFLK 352
           YWPLVMDIARRNKLPRI+RC QIMGR+EQD+L+AAQIFYPCMQCADIFFLK
Sbjct: 128 YWPLVMDIARRNKLPRIMRCVQIMGRSEQDELTAAQIFYPCMQCADIFFLK 178


>ref|XP_002274369.1| PREDICTED: tyrosyl-tRNA synthetase [Vitis vinifera]
           gi|297742518|emb|CBI34667.3| unnamed protein product
           [Vitis vinifera]
          Length = 385

 Score =  190 bits (482), Expect(2) = 1e-69
 Identities = 90/95 (94%), Positives = 92/95 (96%)
 Frame = -2

Query: 287 DIFFLKADICQLGMDQRKVNVLAREYCDDIKRKNKPIILSHHMLPGLQQGQEKMSKSDPS 108
           DIFFLKADICQLGMDQRKVNVLAREYCDDIK KNKPIILSHHMLPGLQQGQEKMSKSDPS
Sbjct: 207 DIFFLKADICQLGMDQRKVNVLAREYCDDIKMKNKPIILSHHMLPGLQQGQEKMSKSDPS 266

Query: 107 SSIYMEDEEAEVNVKIKKAYCPPNIVNGNPCLEYV 3
           SSI+MEDEEAEVNVKIKKAYCPP +V GNPCLEYV
Sbjct: 267 SSIFMEDEEAEVNVKIKKAYCPPKVVEGNPCLEYV 301



 Score = 98.2 bits (243), Expect(2) = 1e-69
 Identities = 44/51 (86%), Positives = 48/51 (94%)
 Frame = -1

Query: 504 YWPLVMDIARRNKLPRIVRCCQIMGRNEQDDLSAAQIFYPCMQCADIFFLK 352
           YWP VMDIARRNKLPRI+RC QIMGR+EQ++LSAAQI YPCMQCADIFFLK
Sbjct: 162 YWPRVMDIARRNKLPRIMRCVQIMGRSEQEELSAAQILYPCMQCADIFFLK 212


Top