BLASTX nr result

ID: Coptis24_contig00007987 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00007987
         (1413 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279455.1| PREDICTED: uncharacterized protein LOC100260...   388   e-105
ref|XP_004158526.1| PREDICTED: uncharacterized LOC101222789 [Cuc...   379   e-102
ref|XP_004138667.1| PREDICTED: uncharacterized protein LOC101222...   378   e-102
ref|XP_002528048.1| electron transporter, putative [Ricinus comm...   377   e-102
ref|XP_002325512.1| predicted protein [Populus trichocarpa] gi|2...   366   9e-99

>ref|XP_002279455.1| PREDICTED: uncharacterized protein LOC100260279 [Vitis vinifera]
            gi|147778834|emb|CAN64828.1| hypothetical protein
            VITISV_030309 [Vitis vinifera]
            gi|297741045|emb|CBI31357.3| unnamed protein product
            [Vitis vinifera]
          Length = 348

 Score =  388 bits (997), Expect = e-105
 Identities = 199/293 (67%), Positives = 224/293 (76%), Gaps = 17/293 (5%)
 Frame = -2

Query: 1079 SVVVVSAGKKNH------GSNDHSVPEEDGSKGSRPASDGDICDIGD--------DWRKF 942
            S+VV + GKKNH      G+ D S+PE D  KG+ P+      D           DWR+F
Sbjct: 56   SLVVRAMGKKNHDNSSSSGNGDRSIPEGDSLKGNNPSEGNKSNDTASQKSRQIIVDWREF 115

Query: 941  RANLIARKQVHLVDVDNPFHDKVSHEISKPLGQKWAHSISVPETGCVLVATEKLDGVPNF 762
            RA L AR+Q    D +         E  KPLG KWAH I VPETGCVLVATEKLDGV +F
Sbjct: 116  RAALFAREQAEKADPEAHSQGGTPQE-PKPLGLKWAHPIPVPETGCVLVATEKLDGVRSF 174

Query: 761  ERTVVLLLRSGTKHPYEGPFGVVINRPLHKKIKHMKPTNLDLATTFADCSLYSGGPLEAS 582
            ERTVVLLLRSGT+HP EGPFGVVINRPLHKKIKHMKPTNLDLATTFADCSL+ GGPLEAS
Sbjct: 175  ERTVVLLLRSGTRHPQEGPFGVVINRPLHKKIKHMKPTNLDLATTFADCSLHFGGPLEAS 234

Query: 581  MFLLNAGANPLLRDFEQVIPGLCFGARNNLDEAAAMVKKGVLRPRDFRFFVGYAGWQLDQ 402
            MFLL  G NP L   E+VIPGLC+GARN+LDEAA +VK+GVL+P+DFRFFVGYAGWQLDQ
Sbjct: 235  MFLLKTGENPKLPGLEEVIPGLCYGARNSLDEAAKLVKQGVLKPQDFRFFVGYAGWQLDQ 294

Query: 401  LKEEIESDYWYVAACSANLISG---GSSSGLWEEILQSMGGHYAEISKKPKQD 252
            L+EEIESDYWYVAACS N+ISG    SSSGLWEE+LQ MGGHY+E+S+KPKQD
Sbjct: 295  LREEIESDYWYVAACSPNVISGVSAESSSGLWEEVLQLMGGHYSELSRKPKQD 347


>ref|XP_004158526.1| PREDICTED: uncharacterized LOC101222789 [Cucumis sativus]
          Length = 362

 Score =  379 bits (973), Expect = e-102
 Identities = 196/299 (65%), Positives = 226/299 (75%), Gaps = 19/299 (6%)
 Frame = -2

Query: 1091 LSYRSVVVVSAGKKNHGSN------DHSVPEEDGSKGSRPASDGDICD---------IGD 957
            LS    +V +  KKNH ++      DHSVP +D    S+  SDG+  +         +  
Sbjct: 66   LSSPGFIVRATAKKNHDNSPSPENGDHSVPGDDAK--SKNISDGNESNEISSQKPHLVNL 123

Query: 956  DWRKFRANLIARKQVHLVDVDNPFHDKVSHEISKPLGQKWAHSISVPETGCVLVATEKLD 777
            DWR+FRANL AR+Q   V+ D       +HE SK L  KWAH I +PETGCVLVATEKLD
Sbjct: 124  DWREFRANLFAREQAEKVEADVETQTANAHE-SKGLALKWAHPIPMPETGCVLVATEKLD 182

Query: 776  GVPNFERTVVLLLRSGTKHPYEGPFGVVINRPLHKKIKHMKPTNLDLATTFADCSLYSGG 597
            GV  FERTVVLLLRSG++HP EGPFGVVINRPLHKKIKHMKPTN+DLATTF++CSL+ GG
Sbjct: 183  GVRTFERTVVLLLRSGSRHPQEGPFGVVINRPLHKKIKHMKPTNIDLATTFSECSLHFGG 242

Query: 596  PLEASMFLLNAGANPLLRDFEQVIPGLCFGARNNLDEAAAMVKKGVLRPRDFRFFVGYAG 417
            PLEASMFLL AG    L  FE+VIPGLCFGARN LDEAA +VKKG+L+P+DFRFFVGYAG
Sbjct: 243  PLEASMFLLKAGEKSKLHGFEEVIPGLCFGARNTLDEAAVLVKKGILKPQDFRFFVGYAG 302

Query: 416  WQLDQLKEEIESDYWYVAACSANLISG----GSSSGLWEEILQSMGGHYAEISKKPKQD 252
            WQLDQL+EEIESDYWYVAACS+NLI G     SS GLWEEILQ MGGHY+E+S+KPKQD
Sbjct: 303  WQLDQLREEIESDYWYVAACSSNLIGGISSDSSSEGLWEEILQLMGGHYSELSRKPKQD 361


>ref|XP_004138667.1| PREDICTED: uncharacterized protein LOC101222789 [Cucumis sativus]
          Length = 362

 Score =  378 bits (971), Expect = e-102
 Identities = 196/299 (65%), Positives = 226/299 (75%), Gaps = 19/299 (6%)
 Frame = -2

Query: 1091 LSYRSVVVVSAGKKNHGSN------DHSVPEEDGSKGSRPASDGDICD---------IGD 957
            LS    +V +  KKNH ++      DHSVP +D    S+  SDG+  +         +  
Sbjct: 66   LSSPGFLVRATAKKNHDNSPSPENGDHSVPGDDAK--SKNISDGNESNETSSQKPHLVNL 123

Query: 956  DWRKFRANLIARKQVHLVDVDNPFHDKVSHEISKPLGQKWAHSISVPETGCVLVATEKLD 777
            DWR+FRANL AR+Q   V+ D       +HE SK L  KWAH I +PETGCVLVATEKLD
Sbjct: 124  DWREFRANLFAREQAEKVEADVETQTANAHE-SKGLALKWAHPIPMPETGCVLVATEKLD 182

Query: 776  GVPNFERTVVLLLRSGTKHPYEGPFGVVINRPLHKKIKHMKPTNLDLATTFADCSLYSGG 597
            GV  FERTVVLLLRSG++HP EGPFGVVINRPLHKKIKHMKPTN+DLATTF++CSL+ GG
Sbjct: 183  GVRTFERTVVLLLRSGSRHPQEGPFGVVINRPLHKKIKHMKPTNIDLATTFSECSLHFGG 242

Query: 596  PLEASMFLLNAGANPLLRDFEQVIPGLCFGARNNLDEAAAMVKKGVLRPRDFRFFVGYAG 417
            PLEASMFLL AG    L  FE+VIPGLCFGARN LDEAA +VKKG+L+P+DFRFFVGYAG
Sbjct: 243  PLEASMFLLKAGEKSKLHGFEEVIPGLCFGARNTLDEAAVLVKKGILKPQDFRFFVGYAG 302

Query: 416  WQLDQLKEEIESDYWYVAACSANLISG----GSSSGLWEEILQSMGGHYAEISKKPKQD 252
            WQLDQL+EEIESDYWYVAACS+NLI G     SS GLWEEILQ MGGHY+E+S+KPKQD
Sbjct: 303  WQLDQLREEIESDYWYVAACSSNLIGGISSDSSSEGLWEEILQLMGGHYSELSRKPKQD 361


>ref|XP_002528048.1| electron transporter, putative [Ricinus communis]
            gi|223532578|gb|EEF34366.1| electron transporter,
            putative [Ricinus communis]
          Length = 350

 Score =  377 bits (968), Expect = e-102
 Identities = 192/293 (65%), Positives = 224/293 (76%), Gaps = 15/293 (5%)
 Frame = -2

Query: 1085 YRSVVVVSAGKKNHGSN---DHSVPEEDGSKGSRPASDGDICD--------IGDDWRKFR 939
            Y S V+ +  KKN+ +N   D   PE DG KGS  +      D        +  DWR+FR
Sbjct: 58   YHSFVIRAMAKKNNNNNGNGDRPNPEGDGLKGSNSSDSKKSNDSASQKSHRVNLDWREFR 117

Query: 938  ANLIARKQVHLVDVDNPFHDKVSHEISKPLGQKWAHSISVPETGCVLVATEKLDGVPNFE 759
            A ++ ++Q  + ++D   +  ++   SKPLG KWAH ISVPETGCVLVATEKLDGV  FE
Sbjct: 118  AKMVIQEQAEIAEIDAA-NQVITPRDSKPLGLKWAHPISVPETGCVLVATEKLDGVRTFE 176

Query: 758  RTVVLLLRSGTKHPYEGPFGVVINRPLHKKIKHMKPTNLDLATTFADCSLYSGGPLEASM 579
            RTVVLLLRSGT+HP EGPFGVVINRPL+KKIKHMKPTN +LATTFADCSL+ GGPLEASM
Sbjct: 177  RTVVLLLRSGTRHPQEGPFGVVINRPLNKKIKHMKPTNKELATTFADCSLHFGGPLEASM 236

Query: 578  FLLNAGANPLLRDFEQVIPGLCFGARNNLDEAAAMVKKGVLRPRDFRFFVGYAGWQLDQL 399
            FLL  G    L  FE+VIPGLCFGARN+LDEAAA+VKKGVL+P+DFRFFVGYAGWQLDQL
Sbjct: 237  FLLQTGEKEKLPGFEEVIPGLCFGARNSLDEAAALVKKGVLKPQDFRFFVGYAGWQLDQL 296

Query: 398  KEEIESDYWYVAACSANLISG----GSSSGLWEEILQSMGGHYAEISKKPKQD 252
            +EEIESDYWYVA+CS+NLI G     SS  LWEEILQ MGGHY+E+S+KPKQD
Sbjct: 297  REEIESDYWYVASCSSNLICGNSSDSSSESLWEEILQLMGGHYSELSRKPKQD 349


>ref|XP_002325512.1| predicted protein [Populus trichocarpa] gi|222862387|gb|EEE99893.1|
            predicted protein [Populus trichocarpa]
          Length = 344

 Score =  366 bits (939), Expect = 9e-99
 Identities = 190/295 (64%), Positives = 218/295 (73%), Gaps = 17/295 (5%)
 Frame = -2

Query: 1085 YRSVVVVSAGKKNHGSNDHSVPEE-----DGSKGSRPASDGDICDIGD--------DWRK 945
            Y S+ V +  KKN   N +S         DGSKGS         D           DWR+
Sbjct: 50   YHSLSVKAMAKKNGNDNSNSSSPSPSGNGDGSKGSNSPDGNKANDFASQKSHRVNFDWRE 109

Query: 944  FRANLIARKQVHLVDVDNPFHDKVSHEISKPLGQKWAHSISVPETGCVLVATEKLDGVPN 765
            FRANL A+++    + D         E SKPLG KWAH I VPETGCVLVATEKLDGV  
Sbjct: 110  FRANLFAQEKAGKAESDAHNQTGTPQE-SKPLGLKWAHPIPVPETGCVLVATEKLDGVRT 168

Query: 764  FERTVVLLLRSGTKHPYEGPFGVVINRPLHKKIKHMKPTNLDLATTFADCSLYSGGPLEA 585
            FERTVVLLLRSGT+HP EGPFGVVINRPL+KK++HMKPTN++LATTFAD SL+ GGPLEA
Sbjct: 169  FERTVVLLLRSGTRHPQEGPFGVVINRPLNKKVRHMKPTNMELATTFADFSLHFGGPLEA 228

Query: 584  SMFLLNAGANPLLRDFEQVIPGLCFGARNNLDEAAAMVKKGVLRPRDFRFFVGYAGWQLD 405
            SMFLL  G    L +FE+VIPGLCFGARN+LDEAAA+VKKGVL+P+DFRFFVGYAGWQLD
Sbjct: 229  SMFLLKTGEKTKLEEFEEVIPGLCFGARNSLDEAAALVKKGVLKPQDFRFFVGYAGWQLD 288

Query: 404  QLKEEIESDYWYVAACSANLISGG----SSSGLWEEILQSMGGHYAEISKKPKQD 252
            QL+EEIES+YWYVAACS+NLI GG    SS  LWEEILQ MGGHY+E+S+KPK+D
Sbjct: 289  QLREEIESNYWYVAACSSNLICGGSSGSSSESLWEEILQLMGGHYSELSRKPKRD 343


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