BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00007979
         (968 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_200894.1| RAB GTPase homolog A1F [Arabidopsis thaliana] g...   402   e-110
ref|XP_002277579.1| PREDICTED: ras-related protein RABA1f [Vitis...   400   e-109
ref|XP_002864709.1| hypothetical protein ARALYDRAFT_919325 [Arab...   399   e-109
ref|XP_003607539.1| GTP-binding protein ras-like protein [Medica...   396   e-108
ref|XP_002525153.1| protein with unknown function [Ricinus commu...   396   e-108

>ref|NP_200894.1| RAB GTPase homolog A1F [Arabidopsis thaliana]
           gi|75171043|sp|Q9FJH0.1|RAA1F_ARATH RecName:
           Full=Ras-related protein RABA1f; Short=AtRABA1f
           gi|10176913|dbj|BAB10106.1| GTP-binding protein,
           ras-like [Arabidopsis thaliana]
           gi|26452359|dbj|BAC43265.1| putative GTP-binding protein
           [Arabidopsis thaliana] gi|28950757|gb|AAO63302.1|
           At5g60860 [Arabidopsis thaliana]
           gi|332010004|gb|AED97387.1| RAB GTPase homolog A1F
           [Arabidopsis thaliana]
          Length = 217

 Score =  402 bits (1032), Expect = e-110
 Identities = 202/207 (97%), Positives = 206/207 (99%)
 Frame = -2

Query: 967 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKVVKAQIWDT 788
           YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDK+VKAQIWDT
Sbjct: 10  YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKIVKAQIWDT 69

Query: 787 AGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMLVGNKAD 608
           AGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIM VGNKAD
Sbjct: 70  AGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMFVGNKAD 129

Query: 607 LRHLRAVSTEDAKSFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALDIGDDP 428
           LRHLRAVSTEDAK+FAERENTFFMETSALESMNVENAFTEVL+QIYRVVSRKALDIGDDP
Sbjct: 130 LRHLRAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLSQIYRVVSRKALDIGDDP 189

Query: 427 AALPKGQTINVGNKDDVSAVKKVGCCS 347
           AALPKGQTINVG+KDDVSAVKKVGCCS
Sbjct: 190 AALPKGQTINVGSKDDVSAVKKVGCCS 216


>ref|XP_002277579.1| PREDICTED: ras-related protein RABA1f [Vitis vinifera]
          Length = 217

 Score =  400 bits (1028), Expect = e-109
 Identities = 203/208 (97%), Positives = 205/208 (98%)
 Frame = -2

Query: 967 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKVVKAQIWDT 788
           YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSI VDDKVVKAQIWDT
Sbjct: 10  YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDT 69

Query: 787 AGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMLVGNKAD 608
           AGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTD+NIVIMLVGNKAD
Sbjct: 70  AGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKAD 129

Query: 607 LRHLRAVSTEDAKSFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALDIGDDP 428
           LRHLRAVSTEDAK+FAEREN FFMETSALESMNVENAFTEVLTQIYRVVSRKALDIGDDP
Sbjct: 130 LRHLRAVSTEDAKAFAERENNFFMETSALESMNVENAFTEVLTQIYRVVSRKALDIGDDP 189

Query: 427 AALPKGQTINVGNKDDVSAVKKVGCCSA 344
           AALPKGQTINVG KDDVSAVKKVGCCSA
Sbjct: 190 AALPKGQTINVGTKDDVSAVKKVGCCSA 217


>ref|XP_002864709.1| hypothetical protein ARALYDRAFT_919325 [Arabidopsis lyrata subsp.
           lyrata] gi|297310544|gb|EFH40968.1| hypothetical protein
           ARALYDRAFT_919325 [Arabidopsis lyrata subsp. lyrata]
          Length = 217

 Score =  399 bits (1026), Expect = e-109
 Identities = 200/207 (96%), Positives = 206/207 (99%)
 Frame = -2

Query: 967 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKVVKAQIWDT 788
           YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDK+VKAQIWDT
Sbjct: 10  YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKIVKAQIWDT 69

Query: 787 AGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMLVGNKAD 608
           AGQERYRAITSAYYRGAVGALLVYDVTRHVTFEN+ERWLKELRDHTD+NIVIM VGNKAD
Sbjct: 70  AGQERYRAITSAYYRGAVGALLVYDVTRHVTFENLERWLKELRDHTDSNIVIMFVGNKAD 129

Query: 607 LRHLRAVSTEDAKSFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALDIGDDP 428
           LRHLRAVSTEDAK+FAERENTFFMETSALESMNVENAFTEVL+QIYRVVSRKALDIGDDP
Sbjct: 130 LRHLRAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLSQIYRVVSRKALDIGDDP 189

Query: 427 AALPKGQTINVGNKDDVSAVKKVGCCS 347
           AALPKGQTINVG+KDDVSAVKKVGCCS
Sbjct: 190 AALPKGQTINVGSKDDVSAVKKVGCCS 216


>ref|XP_003607539.1| GTP-binding protein ras-like protein [Medicago truncatula]
           gi|355508594|gb|AES89736.1| GTP-binding protein ras-like
           protein [Medicago truncatula]
          Length = 217

 Score =  396 bits (1018), Expect = e-108
 Identities = 197/208 (94%), Positives = 207/208 (99%)
 Frame = -2

Query: 967 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKVVKAQIWDT 788
           YDYLFKVVLIGDSGVGKSNLLSRFT+NEFSLESKSTIGVEFATRSIHVDDK+VKAQIWDT
Sbjct: 10  YDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIHVDDKIVKAQIWDT 69

Query: 787 AGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMLVGNKAD 608
           AGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMLVGNKAD
Sbjct: 70  AGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMLVGNKAD 129

Query: 607 LRHLRAVSTEDAKSFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALDIGDDP 428
           LRHLRAVST+DAK+FAERENTFFMETSALES+NV+N+FTEVLTQIYRVVSRK L+IGDDP
Sbjct: 130 LRHLRAVSTDDAKAFAERENTFFMETSALESLNVDNSFTEVLTQIYRVVSRKTLEIGDDP 189

Query: 427 AALPKGQTINVGNKDDVSAVKKVGCCSA 344
           AALPKGQTINVG++DDVSAVKKVGCCSA
Sbjct: 190 AALPKGQTINVGSRDDVSAVKKVGCCSA 217


>ref|XP_002525153.1| protein with unknown function [Ricinus communis]
           gi|223535612|gb|EEF37280.1| protein with unknown
           function [Ricinus communis]
          Length = 216

 Score =  396 bits (1017), Expect = e-108
 Identities = 201/208 (96%), Positives = 207/208 (99%)
 Frame = -2

Query: 967 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKVVKAQIWDT 788
           YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKVVKAQIWDT
Sbjct: 10  YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKVVKAQIWDT 69

Query: 787 AGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMLVGNKAD 608
           AGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTD+NIVIMLVGNKAD
Sbjct: 70  AGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKAD 129

Query: 607 LRHLRAVSTEDAKSFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALDIGDDP 428
           LRHLRAV+TEDAK+FAERE+TFFMETSALES+NVENAFTEVLTQIYRVVSRKALD+GDDP
Sbjct: 130 LRHLRAVTTEDAKAFAERESTFFMETSALESLNVENAFTEVLTQIYRVVSRKALDVGDDP 189

Query: 427 AALPKGQTINVGNKDDVSAVKKVGCCSA 344
           AALPKGQTINVG KDDVSAVKKVGCCSA
Sbjct: 190 AALPKGQTINVG-KDDVSAVKKVGCCSA 216