BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00007971
         (1996 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514298.1| short-chain dehydrogenase, putative [Ricinus...   717   0.0  
ref|XP_003528914.1| PREDICTED: probable chlorophyll(ide) b reduc...   709   0.0  
ref|XP_002280953.1| PREDICTED: probable chlorophyll(ide) b reduc...   708   0.0  
ref|XP_002324420.1| predicted protein [Populus trichocarpa] gi|2...   704   0.0  
ref|XP_003534200.1| PREDICTED: probable chlorophyll(ide) b reduc...   703   0.0  

>ref|XP_002514298.1| short-chain dehydrogenase, putative [Ricinus communis]
            gi|223546754|gb|EEF48252.1| short-chain dehydrogenase,
            putative [Ricinus communis]
          Length = 517

 Score =  717 bits (1852), Expect = 0.0
 Identities = 358/415 (86%), Positives = 385/415 (92%)
 Frame = +3

Query: 357  KEEYKNAVAKAEELFFSCATQVGRYLVTMMSTGVILATGFQLSGGDSQLDTLIWYSWLGG 536
            KEEY  AVAK EE F S A Q+GRY+VTMMSTGVILA GFQLSGGDSQ++TLIWYSWLGG
Sbjct: 103  KEEYAKAVAKLEEAFSSIALQIGRYIVTMMSTGVILAVGFQLSGGDSQMNTLIWYSWLGG 162

Query: 537  IIIGTMIGSNMVLEDHYKAGPRNIVITGSTRGLGKALAREFLLSGDRVIVASRSSESVQS 716
            IIIGTMIG+NMVL++H +AGPRN+VITGSTRGLGKALAREFLLSGDRV+VASRS ESV +
Sbjct: 163  IIIGTMIGANMVLDEHCRAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSPESVDT 222

Query: 717  TVGELEENLKEGIRSASPTSGANMAHAKVFGIACDVCKPEDVERLANFAVKELGSIDIWI 896
            TV ELEENLKEG+ + S TS  N+AHAKV GIAC+VC+P DV++LANFAVKE GSIDIWI
Sbjct: 223  TVRELEENLKEGMVTTSGTSRTNLAHAKVVGIACNVCEPSDVQKLANFAVKEFGSIDIWI 282

Query: 897  NNAGTNKGFRPLLQFADEDIEQIVSTNLVGSLLCTREAMRVMRSQEKGGHIFNMDGAGSG 1076
            NNAGTNKGFRPLLQF+DEDI QIVSTNLVGS+LCTREAMRV+ +Q KGGHIFNMDGAGSG
Sbjct: 283  NNAGTNKGFRPLLQFSDEDINQIVSTNLVGSILCTREAMRVIMNQPKGGHIFNMDGAGSG 342

Query: 1077 GSSTPLTAVYGSTKCGLRQLQASLLTECKRSKVGVHTASPGMVLTDLLLSGSTLKNKQMF 1256
            GSSTPLTAVYGSTKCGLRQLQASL  ECKRSKVGVHTASPGMVLTDLLLSGSTLKNKQMF
Sbjct: 343  GSSTPLTAVYGSTKCGLRQLQASLFKECKRSKVGVHTASPGMVLTDLLLSGSTLKNKQMF 402

Query: 1257 NIICELPETVARTLAPRMRVVKGSGKAINYLTPPRILLALVTAWVRRGRWFDDQGRALYA 1436
            NIICELPETVARTL PRMRVVKGSGKAINYLTPPRILLALVTAW+R+GRWFDDQGRALYA
Sbjct: 403  NIICELPETVARTLVPRMRVVKGSGKAINYLTPPRILLALVTAWLRQGRWFDDQGRALYA 462

Query: 1437 AEADRIRNWAESRARFSFTDAMEMYTENTWVSVFSLSVVCAFIILSSATVTSPGT 1601
            AEADR+RNWAE+RARFSFTDAMEMYTENTWVSVFSLSVVCAFIILSS +   PGT
Sbjct: 463  AEADRLRNWAENRARFSFTDAMEMYTENTWVSVFSLSVVCAFIILSSTSNPFPGT 517


>ref|XP_003528914.1| PREDICTED: probable chlorophyll(ide) b reductase NYC1,
            chloroplastic-like [Glycine max]
          Length = 514

 Score =  709 bits (1830), Expect = 0.0
 Identities = 373/519 (71%), Positives = 418/519 (80%), Gaps = 4/519 (0%)
 Frame = +3

Query: 57   MATLTELHFSLKILDSSSRTNKKHRLRNF-SLGNYEILVFRQQNCGRGLSLRACRSFKCE 233
            MAT+ +LH   + L+     + +   R F S  +  +L F    C R  S++ CR+F+ E
Sbjct: 1    MATVVKLHVVPECLNQQKTRSLR---RGFGSCPSPGVLGFGHY-CDR-FSVKVCRAFRTE 55

Query: 234  DXXXXXXXXXXXXXXXXXXXXXAL---YSLKTFLLKVSGTTPPGKEEYKNAVAKAEELFF 404
            D                           SLK+ LL+         +EY+ AVAK E L  
Sbjct: 56   DGGDVKEKKLRNLKKNEEKTKRESGFWSSLKSILLRNFMVGSKSDDEYRQAVAKVEGLLS 115

Query: 405  SCATQVGRYLVTMMSTGVILATGFQLSGGDSQLDTLIWYSWLGGIIIGTMIGSNMVLEDH 584
            S A Q+GRY+VTMMSTGVIL+ GFQ+SGGDSQ+D LIWYSWLGG+IIGTMIG+NMVLE+H
Sbjct: 116  SIAIQIGRYIVTMMSTGVILSIGFQMSGGDSQMDALIWYSWLGGVIIGTMIGANMVLEEH 175

Query: 585  YKAGPRNIVITGSTRGLGKALAREFLLSGDRVIVASRSSESVQSTVGELEENLKEGIRSA 764
             +AGPRN+VITGSTRGLGKALAREFLLSGDRVIV SRS ESVQ+T+ ELEENLKEGI +A
Sbjct: 176  CRAGPRNVVITGSTRGLGKALAREFLLSGDRVIVTSRSPESVQATIKELEENLKEGIANA 235

Query: 765  SPTSGANMAHAKVFGIACDVCKPEDVERLANFAVKELGSIDIWINNAGTNKGFRPLLQFA 944
              +S   ++HAKV GIACDVC+P DV+RLANFAVKELG IDIWINNAGTNKGFRPLLQF+
Sbjct: 236  VGSSLTKLSHAKVVGIACDVCEPHDVQRLANFAVKELGHIDIWINNAGTNKGFRPLLQFS 295

Query: 945  DEDIEQIVSTNLVGSLLCTREAMRVMRSQEKGGHIFNMDGAGSGGSSTPLTAVYGSTKCG 1124
            DEDI+QIVSTNLVGS+LCTREAMRVMR+Q   GHIFNMDGAGSGGSSTPLTAVYGSTKCG
Sbjct: 296  DEDIKQIVSTNLVGSILCTREAMRVMRNQAIAGHIFNMDGAGSGGSSTPLTAVYGSTKCG 355

Query: 1125 LRQLQASLLTECKRSKVGVHTASPGMVLTDLLLSGSTLKNKQMFNIICELPETVARTLAP 1304
            LRQLQ SLL ECKRSKVGVHTASPGMVLTDLLLSGST++N+QMFNIICELPETVARTL P
Sbjct: 356  LRQLQGSLLKECKRSKVGVHTASPGMVLTDLLLSGSTVQNRQMFNIICELPETVARTLVP 415

Query: 1305 RMRVVKGSGKAINYLTPPRILLALVTAWVRRGRWFDDQGRALYAAEADRIRNWAESRARF 1484
            RMRVVKG+GKAINYLTPPRILLALVTAW+RRGRWFDDQGRALYAAEADR+RNWAE RARF
Sbjct: 416  RMRVVKGTGKAINYLTPPRILLALVTAWLRRGRWFDDQGRALYAAEADRLRNWAEDRARF 475

Query: 1485 SFTDAMEMYTENTWVSVFSLSVVCAFIILSSATVTSPGT 1601
            SFTDAMEMYTENTW+SVFSLSVVCAFIILSS     PGT
Sbjct: 476  SFTDAMEMYTENTWLSVFSLSVVCAFIILSSTGSNLPGT 514


>ref|XP_002280953.1| PREDICTED: probable chlorophyll(ide) b reductase NYC1, chloroplastic
            [Vitis vinifera] gi|297738824|emb|CBI28069.3| unnamed
            protein product [Vitis vinifera]
          Length = 517

 Score =  708 bits (1828), Expect = 0.0
 Identities = 370/524 (70%), Positives = 417/524 (79%), Gaps = 9/524 (1%)
 Frame = +3

Query: 57   MATLTELHFSLKILDSSSRTNKKHRLRNFSLGNYEILVFRQQNCGRGLSLRACRSFKCED 236
            MA +T+L  S      S      HR   + L   + + FR +   RG+ L  CRSF+  D
Sbjct: 1    MAAVTKLQIS----PYSLHPRTHHRAARWPLRRPQFVSFRGR---RGVYLLPCRSFRSGD 53

Query: 237  XXXXXXXXXXXXXXXXXXXXXA---------LYSLKTFLLKVSGTTPPGKEEYKNAVAKA 389
                                           L   K+  ++VSG+ P  +EE++ AVAK 
Sbjct: 54   GGELEEQEKESVRKGGNLKENRVEGKEGSGILSFAKSVFVRVSGSFPRTEEEHRIAVAKL 113

Query: 390  EELFFSCATQVGRYLVTMMSTGVILATGFQLSGGDSQLDTLIWYSWLGGIIIGTMIGSNM 569
            EE+F S A Q+GRY+VTMMSTGVILA GFQLSGGDSQ++ LIWYSWLGGIIIGTMIG+N+
Sbjct: 114  EEIFSSIAVQIGRYIVTMMSTGVILAIGFQLSGGDSQMNALIWYSWLGGIIIGTMIGANL 173

Query: 570  VLEDHYKAGPRNIVITGSTRGLGKALAREFLLSGDRVIVASRSSESVQSTVGELEENLKE 749
            VLE+H +AGPRN+VITGSTRGLGKALAREFLLSGDRV+VASRS ESV +TV ELEENLKE
Sbjct: 174  VLEEHCRAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSPESVHATVRELEENLKE 233

Query: 750  GIRSASPTSGANMAHAKVFGIACDVCKPEDVERLANFAVKELGSIDIWINNAGTNKGFRP 929
            G+ +A   S  N+  AKV GIACDVC+P+DV++LANFAV E GSI+IWINNAGTNKGFRP
Sbjct: 234  GMVTAGGPSKTNLERAKVVGIACDVCEPDDVQKLANFAVSEFGSINIWINNAGTNKGFRP 293

Query: 930  LLQFADEDIEQIVSTNLVGSLLCTREAMRVMRSQEKGGHIFNMDGAGSGGSSTPLTAVYG 1109
            LLQF DEDI+QIVSTNLVGSLLCT+EA+RVMRSQ  GGHIFNMDGAGSGGSSTPLTAVYG
Sbjct: 294  LLQFTDEDIKQIVSTNLVGSLLCTQEAIRVMRSQGNGGHIFNMDGAGSGGSSTPLTAVYG 353

Query: 1110 STKCGLRQLQASLLTECKRSKVGVHTASPGMVLTDLLLSGSTLKNKQMFNIICELPETVA 1289
            STKCGLRQLQ SLL ECKRS VGVHTASPGMVLTDLLLSGST++NKQMFNIICELPETVA
Sbjct: 354  STKCGLRQLQGSLLKECKRSNVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVA 413

Query: 1290 RTLAPRMRVVKGSGKAINYLTPPRILLALVTAWVRRGRWFDDQGRALYAAEADRIRNWAE 1469
            RTL PRMRVVKG+GKAINYLTPPRILLAL+T W+R+GRWFD+QGRALYAAEADRIRNWAE
Sbjct: 414  RTLVPRMRVVKGTGKAINYLTPPRILLALITVWLRQGRWFDEQGRALYAAEADRIRNWAE 473

Query: 1470 SRARFSFTDAMEMYTENTWVSVFSLSVVCAFIILSSATVTSPGT 1601
            +R RFSFTDAMEMYTENTWVSVFSLSVVCAFIILSS   + PGT
Sbjct: 474  NRTRFSFTDAMEMYTENTWVSVFSLSVVCAFIILSSTGSSFPGT 517


>ref|XP_002324420.1| predicted protein [Populus trichocarpa] gi|222865854|gb|EEF02985.1|
            predicted protein [Populus trichocarpa]
          Length = 436

 Score =  704 bits (1818), Expect = 0.0
 Identities = 351/422 (83%), Positives = 388/422 (91%), Gaps = 1/422 (0%)
 Frame = +3

Query: 339  GTTPP-GKEEYKNAVAKAEELFFSCATQVGRYLVTMMSTGVILATGFQLSGGDSQLDTLI 515
            GT P    EE++ AVA+ EE+F S A Q+GRY+VTMMSTGV+LA GFQLSGGDSQ++TLI
Sbjct: 17   GTLPSQSNEEHREAVARLEEVFSSAALQIGRYIVTMMSTGVVLAVGFQLSGGDSQMNTLI 76

Query: 516  WYSWLGGIIIGTMIGSNMVLEDHYKAGPRNIVITGSTRGLGKALAREFLLSGDRVIVASR 695
            WYSWLGGIIIGTMIG+NMVL++H +AGPRN+VITGSTRGLGKALAREFLLSGD V+VASR
Sbjct: 77   WYSWLGGIIIGTMIGANMVLDEHCRAGPRNVVITGSTRGLGKALAREFLLSGDHVVVASR 136

Query: 696  SSESVQSTVGELEENLKEGIRSASPTSGANMAHAKVFGIACDVCKPEDVERLANFAVKEL 875
            S ESV +T+ ELEENLKEG+ +AS  +  ++AHAKV GIACDVC+P DV++LANFAV E 
Sbjct: 137  SPESVDTTIRELEENLKEGMITAS--NRTSLAHAKVVGIACDVCEPSDVQKLANFAVNEF 194

Query: 876  GSIDIWINNAGTNKGFRPLLQFADEDIEQIVSTNLVGSLLCTREAMRVMRSQEKGGHIFN 1055
            GSIDIWINNAGTNKGFRPLLQF DEDI+QIVSTNLVGS+LCT+EAMR+M +Q KGGHIFN
Sbjct: 195  GSIDIWINNAGTNKGFRPLLQFTDEDIKQIVSTNLVGSILCTQEAMRMMMNQPKGGHIFN 254

Query: 1056 MDGAGSGGSSTPLTAVYGSTKCGLRQLQASLLTECKRSKVGVHTASPGMVLTDLLLSGST 1235
            MDGAGSGGSSTPLTAVYGSTKCGLRQLQASLL ECKRSKVG+HTASPGMVLTDLLLSGST
Sbjct: 255  MDGAGSGGSSTPLTAVYGSTKCGLRQLQASLLKECKRSKVGIHTASPGMVLTDLLLSGST 314

Query: 1236 LKNKQMFNIICELPETVARTLAPRMRVVKGSGKAINYLTPPRILLALVTAWVRRGRWFDD 1415
            LKNKQMFNIICELPETVARTL PRMRVVKG+GKAI+YLTPPRILLALVTAW+RRGRWFDD
Sbjct: 315  LKNKQMFNIICELPETVARTLVPRMRVVKGTGKAISYLTPPRILLALVTAWLRRGRWFDD 374

Query: 1416 QGRALYAAEADRIRNWAESRARFSFTDAMEMYTENTWVSVFSLSVVCAFIILSSATVTSP 1595
            QGRALYAAEADR+RNWAE+RA+FSFTDAMEMYTENTWVSVFSLSVVCAFIILSS   T P
Sbjct: 375  QGRALYAAEADRLRNWAENRAQFSFTDAMEMYTENTWVSVFSLSVVCAFIILSSTGSTFP 434

Query: 1596 GT 1601
            GT
Sbjct: 435  GT 436


>ref|XP_003534200.1| PREDICTED: probable chlorophyll(ide) b reductase NYC1,
            chloroplastic-like [Glycine max]
          Length = 515

 Score =  703 bits (1814), Expect = 0.0
 Identities = 366/520 (70%), Positives = 415/520 (79%), Gaps = 5/520 (0%)
 Frame = +3

Query: 57   MATLTELHFSLKILDSSSRTNKKHRLRNF--SLGNYEILVFRQQNCGRGLSLRACRSFKC 230
            MAT+ +LH    +   S   +K   LR    S  +  +L F  +N  +  S++ CR+F+ 
Sbjct: 1    MATVVKLH----VFPESLNQHKTRLLRRGFGSCPSPGVLGFGHKNYDQ-FSVKVCRAFRT 55

Query: 231  EDXXXXXXXXXXXXXXXXXXXXXAL---YSLKTFLLKVSGTTPPGKEEYKNAVAKAEELF 401
            ED                           SLK+ LL+         +EY+ AV K E L 
Sbjct: 56   EDGGDVKEKKFRNLKKNEEKTKRESGFWSSLKSILLRNFMVGSKSDDEYRQAVVKVEGLL 115

Query: 402  FSCATQVGRYLVTMMSTGVILATGFQLSGGDSQLDTLIWYSWLGGIIIGTMIGSNMVLED 581
             S A Q+GRY+VTMMSTGVIL+ GFQ+SGGDSQ+D LIWYSWLGG+IIGTMIG+NMVLE+
Sbjct: 116  SSIAIQIGRYIVTMMSTGVILSIGFQMSGGDSQMDALIWYSWLGGVIIGTMIGANMVLEE 175

Query: 582  HYKAGPRNIVITGSTRGLGKALAREFLLSGDRVIVASRSSESVQSTVGELEENLKEGIRS 761
            H +AGPRN+VITGSTRGLGKALAREFLLSGDRVIV SRS ESVQ T+ ELEENLKEGI +
Sbjct: 176  HCRAGPRNVVITGSTRGLGKALAREFLLSGDRVIVTSRSPESVQDTIKELEENLKEGIAN 235

Query: 762  ASPTSGANMAHAKVFGIACDVCKPEDVERLANFAVKELGSIDIWINNAGTNKGFRPLLQF 941
            A  +S   ++ AKV GI+CDVC+P DV+RLANFAVKELG IDIWINNAGTNKGFRPLLQF
Sbjct: 236  AVGSSLTKLSQAKVIGISCDVCEPHDVQRLANFAVKELGHIDIWINNAGTNKGFRPLLQF 295

Query: 942  ADEDIEQIVSTNLVGSLLCTREAMRVMRSQEKGGHIFNMDGAGSGGSSTPLTAVYGSTKC 1121
            +DEDI+QIVSTNLVGS+LCTREA+R+MR+Q   GHIFNMDGAGSGGSSTPLTAVYGSTKC
Sbjct: 296  SDEDIKQIVSTNLVGSILCTREAVRIMRNQANAGHIFNMDGAGSGGSSTPLTAVYGSTKC 355

Query: 1122 GLRQLQASLLTECKRSKVGVHTASPGMVLTDLLLSGSTLKNKQMFNIICELPETVARTLA 1301
            GLRQLQ SLL ECKRSKVGVHTASPGMVLTDLLLSGST++N+QMFNIICELPETVARTL 
Sbjct: 356  GLRQLQGSLLKECKRSKVGVHTASPGMVLTDLLLSGSTVQNRQMFNIICELPETVARTLV 415

Query: 1302 PRMRVVKGSGKAINYLTPPRILLALVTAWVRRGRWFDDQGRALYAAEADRIRNWAESRAR 1481
            PRMRVVKG+GKAINYLTPPRILLAL+TAW+R+GRWFDDQGRALYAAEADR+RNWAE RAR
Sbjct: 416  PRMRVVKGTGKAINYLTPPRILLALITAWLRQGRWFDDQGRALYAAEADRLRNWAEDRAR 475

Query: 1482 FSFTDAMEMYTENTWVSVFSLSVVCAFIILSSATVTSPGT 1601
            FSFTDAMEMYTENTW+SVFSLSVVCAFIILSS     PGT
Sbjct: 476  FSFTDAMEMYTENTWLSVFSLSVVCAFIILSSTGSNLPGT 515