BLASTX nr result

ID: Coptis24_contig00007969 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00007969
         (1123 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278915.1| PREDICTED: E3 ubiquitin-protein ligase XBAT3...   386   e-105
ref|XP_003548210.1| PREDICTED: E3 ubiquitin-protein ligase XBAT3...   370   e-100
ref|XP_002510819.1| ankyrin repeat-containing protein, putative ...   369   e-100
ref|XP_003536476.1| PREDICTED: E3 ubiquitin-protein ligase XBAT3...   365   1e-98
ref|XP_002322458.1| predicted protein [Populus trichocarpa] gi|2...   365   1e-98

>ref|XP_002278915.1| PREDICTED: E3 ubiquitin-protein ligase XBAT33 [Vitis vinifera]
            gi|297741088|emb|CBI31819.3| unnamed protein product
            [Vitis vinifera]
          Length = 512

 Score =  386 bits (991), Expect = e-105
 Identities = 186/257 (72%), Positives = 206/257 (80%), Gaps = 1/257 (0%)
 Frame = -3

Query: 1121 WLPLDVARIWGRHWLEPLLSPSSNSDIPTFAPSNYLSLPLLSVLNIARECGLQSST-SCD 945
            WLPLDVAR+WGRHWLEPLL+P+S+S IP F PSN LSLPL+SVLNIARECGLQSST S D
Sbjct: 255  WLPLDVARMWGRHWLEPLLAPNSDSIIPVFPPSNCLSLPLMSVLNIARECGLQSSTTSSD 314

Query: 944  ESDVCAVCLERACTVAGEGCGHALCVRCALYLCSTSSIPSEMDGPPGSIPCPLCRHGIIS 765
            E+D+CAVCLERACTVA EGCGH LCVRCALYLCSTS+IPSEM GPPGSIPCPLCRHGI S
Sbjct: 315  ETDICAVCLERACTVAAEGCGHELCVRCALYLCSTSNIPSEMVGPPGSIPCPLCRHGITS 374

Query: 764  FAKLPCSQAKELKLRLSLGLCTPCMLHHHDPDSSTIASRPEIRRNRVASVSSDXXXXXXX 585
            F KLP S AKE+KL LSLGLCTPCMLH  + D  + A  PEIR+NRVASVSSD       
Sbjct: 375  FVKLPGSPAKEIKLHLSLGLCTPCMLHPRESDRPSPACTPEIRKNRVASVSSDILCPVSC 434

Query: 584  XXXXXXXXPMCACNDDPCPSLEPHDGEIQGESPRQSQATLGEQDKFDGQRLEKTTCSSMF 405
                    P+C C+D PCPS EP + E Q ESPR+SQ T  +QDK +G RLE+T+CSSMF
Sbjct: 435  SPFPSVTIPLCTCDDGPCPSFEPREVETQDESPRRSQTTSIDQDKMEGARLERTSCSSMF 494

Query: 404  WSRRSCHREHQCNSEIN 354
            W RRSC REHQCNSEIN
Sbjct: 495  WGRRSCSREHQCNSEIN 511


>ref|XP_003548210.1| PREDICTED: E3 ubiquitin-protein ligase XBAT33-like [Glycine max]
          Length = 511

 Score =  370 bits (949), Expect = e-100
 Identities = 178/257 (69%), Positives = 200/257 (77%), Gaps = 1/257 (0%)
 Frame = -3

Query: 1121 WLPLDVARIWGRHWLEPLLSPSSNSDIPTFAPSNYLSLPLLSVLNIARECGLQSST-SCD 945
            WLPLDVAR+WGRHWLEPLL+P+S++ I +F  SNYLSLPL+SVLNIARECGLQS+T S +
Sbjct: 254  WLPLDVARMWGRHWLEPLLTPTSDATISSFPSSNYLSLPLMSVLNIARECGLQSTTTSSN 313

Query: 944  ESDVCAVCLERACTVAGEGCGHALCVRCALYLCSTSSIPSEMDGPPGSIPCPLCRHGIIS 765
            E DVCAVCLER C+VA EGCGH LCVRCALYLCSTS++ SE  GPPGSIPCPLCRHGIIS
Sbjct: 314  EVDVCAVCLERQCSVAAEGCGHELCVRCALYLCSTSNVSSETCGPPGSIPCPLCRHGIIS 373

Query: 764  FAKLPCSQAKELKLRLSLGLCTPCMLHHHDPDSSTIASRPEIRRNRVASVSSDXXXXXXX 585
            F KLP SQAKE KL +SL LCTPCMLH  D D  T++  PEIRRNRVASV S+       
Sbjct: 374  FVKLPGSQAKENKLHVSLSLCTPCMLHPCDLDRPTVSHTPEIRRNRVASVPSEMLCPVTC 433

Query: 584  XXXXXXXXPMCACNDDPCPSLEPHDGEIQGESPRQSQATLGEQDKFDGQRLEKTTCSSMF 405
                    P+C CN+ PCPS EP + E QG SP  S A++ +QDK DG RLEKTTCS MF
Sbjct: 434  TPFPSVAIPLCTCNNGPCPSFEPREAEAQGGSPLHSHASMMDQDKMDGPRLEKTTCSGMF 493

Query: 404  WSRRSCHREHQCNSEIN 354
            W RRSC REHQCNSEIN
Sbjct: 494  WGRRSCSREHQCNSEIN 510


>ref|XP_002510819.1| ankyrin repeat-containing protein, putative [Ricinus communis]
            gi|223549934|gb|EEF51421.1| ankyrin repeat-containing
            protein, putative [Ricinus communis]
          Length = 513

 Score =  369 bits (947), Expect = e-100
 Identities = 181/258 (70%), Positives = 199/258 (77%), Gaps = 2/258 (0%)
 Frame = -3

Query: 1121 WLPLDVARIWGRHWLEPLLSPSSNSDIPTFAPSNYLSLPLLSVLNIARECGLQS-STSCD 945
            WLP+DVAR+WGRHWLEPLL+P S+S +P F  SN+LSLPLLSVLNIARECG+Q  +TS D
Sbjct: 255  WLPVDVARMWGRHWLEPLLAPYSDSVVPRFPHSNFLSLPLLSVLNIARECGMQCLTTSSD 314

Query: 944  ESDVCAVCLERACTVAGEGCGHALCVRCALYLCSTSSIPSEMDGPPGSIPCPLCRHGIIS 765
            + D+CAVCLERAC VA EGC H LCVRCALYLCSTS+IPSEM GPPGSIPCPLCRH I+S
Sbjct: 315  DPDICAVCLERACNVAAEGCRHELCVRCALYLCSTSNIPSEMVGPPGSIPCPLCRHAIVS 374

Query: 764  FAKLPCSQAKELKLRLSLGLCTPCMLHHHDPDSSTIASRPEIRRNRVASVSSDXXXXXXX 585
            F KLP S AKE+KL LSLGLCTPCMLH  D D  + A  PEIR+NRVASVSSD       
Sbjct: 375  FEKLPGSPAKEIKLPLSLGLCTPCMLHSRDTDGQSPACVPEIRKNRVASVSSDFLCPVTC 434

Query: 584  XXXXXXXXPMCACNDDPCPSLEPHDGEIQGESPRQSQATLGEQDKFDGQRLEKTTCSS-M 408
                    P+C CND PCPS EP   E Q ESPR SQAT  EQDK +G RLEKT+CS  M
Sbjct: 435  SPFPSVAIPLCTCNDGPCPSFEPRTVETQDESPRGSQATSVEQDKIEGPRLEKTSCSGMM 494

Query: 407  FWSRRSCHREHQCNSEIN 354
            FW RRSC REHQCNSEIN
Sbjct: 495  FWGRRSCSREHQCNSEIN 512


>ref|XP_003536476.1| PREDICTED: E3 ubiquitin-protein ligase XBAT33-like [Glycine max]
          Length = 512

 Score =  365 bits (937), Expect = 1e-98
 Identities = 175/257 (68%), Positives = 200/257 (77%), Gaps = 1/257 (0%)
 Frame = -3

Query: 1121 WLPLDVARIWGRHWLEPLLSPSSNSDIPTFAPSNYLSLPLLSVLNIARECGLQSS-TSCD 945
            WLPLD+AR+WGRHWLE LL+PSS++ IPTF+ SNYLSLPL+SVLNIARE GLQSS TS D
Sbjct: 255  WLPLDIARMWGRHWLEQLLAPSSDASIPTFSHSNYLSLPLMSVLNIAREYGLQSSPTSSD 314

Query: 944  ESDVCAVCLERACTVAGEGCGHALCVRCALYLCSTSSIPSEMDGPPGSIPCPLCRHGIIS 765
            E D CAVCLER C+VA EGCGH LCVRCALYLCST+++ SEM GPPGSIPCPLCRHG++S
Sbjct: 315  EIDFCAVCLERPCSVAAEGCGHELCVRCALYLCSTNNVSSEMLGPPGSIPCPLCRHGVVS 374

Query: 764  FAKLPCSQAKELKLRLSLGLCTPCMLHHHDPDSSTIASRPEIRRNRVASVSSDXXXXXXX 585
            F KLP SQAKE KL +SLGLCTPC+LH  D D  +++  PEI RNRVASV S+       
Sbjct: 375  FVKLPGSQAKENKLHVSLGLCTPCILHPRDLDQPSLSHTPEIGRNRVASVPSEIRCPVTC 434

Query: 584  XXXXXXXXPMCACNDDPCPSLEPHDGEIQGESPRQSQATLGEQDKFDGQRLEKTTCSSMF 405
                    P+C CND PCPS EP + E Q  SP  SQA+  +QDK +G RL+KTTCSSMF
Sbjct: 435  SPFPSMAIPLCTCNDGPCPSFEPGEVETQDGSPHHSQASTVDQDKIEGPRLDKTTCSSMF 494

Query: 404  WSRRSCHREHQCNSEIN 354
            W RRSC REHQCNSEIN
Sbjct: 495  WGRRSCSREHQCNSEIN 511


>ref|XP_002322458.1| predicted protein [Populus trichocarpa] gi|222869454|gb|EEF06585.1|
            predicted protein [Populus trichocarpa]
          Length = 511

 Score =  365 bits (937), Expect = 1e-98
 Identities = 176/258 (68%), Positives = 198/258 (76%), Gaps = 1/258 (0%)
 Frame = -3

Query: 1121 WLPLDVARIWGRHWLEPLLSPSSNSDIPTFAPSNYLSLPLLSVLNIARECGLQSSTSC-D 945
            WLP+DVAR+WGRHWLEPLL+P+S+S IP F  SNYLSLPLLSVLNIARE G+  S S  D
Sbjct: 255  WLPVDVARMWGRHWLEPLLAPNSDSAIPRFPHSNYLSLPLLSVLNIARESGMHCSVSASD 314

Query: 944  ESDVCAVCLERACTVAGEGCGHALCVRCALYLCSTSSIPSEMDGPPGSIPCPLCRHGIIS 765
            + D+CAVCLERAC VA EGCGH LCVRCALYLCST +IPSEM GP GSIPCPLCRHGI+S
Sbjct: 315  DPDICAVCLERACNVAAEGCGHELCVRCALYLCSTCNIPSEMVGPTGSIPCPLCRHGIVS 374

Query: 764  FAKLPCSQAKELKLRLSLGLCTPCMLHHHDPDSSTIASRPEIRRNRVASVSSDXXXXXXX 585
            F +LP S AKE+KL LSLGLCTPCMLH HD D  + A  PE+R+NRV SVSSD       
Sbjct: 375  FVRLPGSSAKEMKLPLSLGLCTPCMLHSHDVDGQSPACLPEVRKNRVVSVSSDFLCPVTC 434

Query: 584  XXXXXXXXPMCACNDDPCPSLEPHDGEIQGESPRQSQATLGEQDKFDGQRLEKTTCSSMF 405
                    P+C CND PCPS EP + E Q ES  + Q ++ EQDK +G RLEKT+CSSMF
Sbjct: 435  SPFPSVAIPLCTCNDGPCPSFEPQEVESQDESSHRPQTSV-EQDKMEGPRLEKTSCSSMF 493

Query: 404  WSRRSCHREHQCNSEINT 351
            W RRSC REHQCNSEINT
Sbjct: 494  WGRRSCSREHQCNSEINT 511


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