BLASTX nr result

ID: Coptis24_contig00007966 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00007966
         (863 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271498.1| PREDICTED: UPF0172 protein At5g55940 [Vitis ...   317   2e-84
emb|CAN78153.1| hypothetical protein VITISV_040251 [Vitis vinifera]   317   3e-84
ref|XP_002522792.1| Neighbor of COX4, putative [Ricinus communis...   316   5e-84
ref|XP_002300390.1| predicted protein [Populus trichocarpa] gi|2...   305   9e-81
ref|XP_002300389.1| predicted protein [Populus trichocarpa] gi|2...   298   1e-78

>ref|XP_002271498.1| PREDICTED: UPF0172 protein At5g55940 [Vitis vinifera]
           gi|296089957|emb|CBI39776.3| unnamed protein product
           [Vitis vinifera]
          Length = 206

 Score =  317 bits (813), Expect = 2e-84
 Identities = 151/206 (73%), Positives = 177/206 (85%), Gaps = 4/206 (1%)
 Frame = +1

Query: 31  MGGELKYEIGQNAYIKLVLHALKHKASAVNGVLIGRLIKD----EVVEISDAVPLSHSHI 198
           MGGELKYEI QNAYIKLVLHALKHK +AVN VL+GRL+        ++ISDAVPL HS I
Sbjct: 1   MGGELKYEIAQNAYIKLVLHALKHKTAAVNAVLLGRLVTSTDGSHTLQISDAVPLFHSQI 60

Query: 199 GLVPTLEIALIQIEEHFGSQGLSVVGYYHANERFDDLELGNVAKKIGDHIYRYFPQVSVL 378
            L+P LEIALIQIEE++G+Q + +VGY+HANERFDD EL +VAK IGDHIYRYFPQ +V+
Sbjct: 61  TLLPPLEIALIQIEEYYGAQDMGIVGYFHANERFDDAELSSVAKNIGDHIYRYFPQAAVI 120

Query: 379 LLDNKKLESLIKGKDRNPVVQLYTRDLSKNWKQAGSGGSGSLTLKEPSANIVLLDYIVSQ 558
           LLDNKKLESL KGKDR+PV+QLYT+D SKNW+ AGS GS  LT+KEPSAN+VLLDYI S+
Sbjct: 121 LLDNKKLESLPKGKDRSPVMQLYTKDASKNWRHAGSDGSSQLTIKEPSANVVLLDYIASE 180

Query: 559 KWEGVVDFDDHLDDISKDWLNPDLFK 636
           KW+ ++DFDDHLDDISKDWLNP+LFK
Sbjct: 181 KWQDIIDFDDHLDDISKDWLNPELFK 206


>emb|CAN78153.1| hypothetical protein VITISV_040251 [Vitis vinifera]
          Length = 206

 Score =  317 bits (811), Expect = 3e-84
 Identities = 151/206 (73%), Positives = 177/206 (85%), Gaps = 4/206 (1%)
 Frame = +1

Query: 31  MGGELKYEIGQNAYIKLVLHALKHKASAVNGVLIGRLIKD----EVVEISDAVPLSHSHI 198
           MGGELKYEI QNAYIKLVLHALKHK +AVN VL+GRL+        ++ISDAVPL HS I
Sbjct: 1   MGGELKYEIAQNAYIKLVLHALKHKTAAVNAVLLGRLVTSTDGSHTLQISDAVPLFHSQI 60

Query: 199 GLVPTLEIALIQIEEHFGSQGLSVVGYYHANERFDDLELGNVAKKIGDHIYRYFPQVSVL 378
            L+P LEIALIQIEE++G+Q + +VGY+HANERFDD EL +VAK IGDHIYRYFPQ +V+
Sbjct: 61  TLLPPLEIALIQIEEYYGAQDMGIVGYFHANERFDDAELSSVAKNIGDHIYRYFPQAAVI 120

Query: 379 LLDNKKLESLIKGKDRNPVVQLYTRDLSKNWKQAGSGGSGSLTLKEPSANIVLLDYIVSQ 558
           LLDNKKLESL KGKDR+PV+QLYT+D SKNW+ AGS GS  LT+KEPSAN+VLLDYI S+
Sbjct: 121 LLDNKKLESLPKGKDRSPVMQLYTKDASKNWRLAGSDGSSQLTIKEPSANVVLLDYIASE 180

Query: 559 KWEGVVDFDDHLDDISKDWLNPDLFK 636
           KW+ ++DFDDHLDDISKDWLNP+LFK
Sbjct: 181 KWQDIIDFDDHLDDISKDWLNPELFK 206


>ref|XP_002522792.1| Neighbor of COX4, putative [Ricinus communis]
           gi|223538030|gb|EEF39643.1| Neighbor of COX4, putative
           [Ricinus communis]
          Length = 204

 Score =  316 bits (809), Expect = 5e-84
 Identities = 148/201 (73%), Positives = 177/201 (88%)
 Frame = +1

Query: 34  GGELKYEIGQNAYIKLVLHALKHKASAVNGVLIGRLIKDEVVEISDAVPLSHSHIGLVPT 213
           GGELKYEI QNAYIKLVLHALKHK+++VNGVL+GR  K +VVEI ++VPL H+H+GL+P 
Sbjct: 4   GGELKYEISQNAYIKLVLHALKHKSTSVNGVLLGRSDKKDVVEIVESVPLFHNHLGLLPP 63

Query: 214 LEIALIQIEEHFGSQGLSVVGYYHANERFDDLELGNVAKKIGDHIYRYFPQVSVLLLDNK 393
           LEI+LI IEE++G+QGL +VGY+HANERFDD ELGNVAK IGDHI+RYFPQ ++LLLDNK
Sbjct: 64  LEISLIMIEEYYGAQGLGIVGYFHANERFDDFELGNVAKNIGDHIFRYFPQAAILLLDNK 123

Query: 394 KLESLIKGKDRNPVVQLYTRDLSKNWKQAGSGGSGSLTLKEPSANIVLLDYIVSQKWEGV 573
           KLE+L KGKD++PV+QLYTRD SKNWK A S G   L  KEP+AN+VLLD+I S+KW+ V
Sbjct: 124 KLEALTKGKDQSPVLQLYTRDASKNWKLAESDGGSKLIPKEPAANVVLLDFISSKKWQDV 183

Query: 574 VDFDDHLDDISKDWLNPDLFK 636
           VDFDDHLDDI+KDWLNPDLFK
Sbjct: 184 VDFDDHLDDITKDWLNPDLFK 204


>ref|XP_002300390.1| predicted protein [Populus trichocarpa] gi|222847648|gb|EEE85195.1|
           predicted protein [Populus trichocarpa]
          Length = 204

 Score =  305 bits (781), Expect = 9e-81
 Identities = 147/201 (73%), Positives = 172/201 (85%)
 Frame = +1

Query: 34  GGELKYEIGQNAYIKLVLHALKHKASAVNGVLIGRLIKDEVVEISDAVPLSHSHIGLVPT 213
           GGEL+YEI QNAYIKLVLH+LKHK SAVNGV +G    D+ V+I D+VPL H+H+GL+P 
Sbjct: 5   GGELRYEISQNAYIKLVLHSLKHKTSAVNGVFVGSSC-DDGVQIIDSVPLFHNHLGLLPP 63

Query: 214 LEIALIQIEEHFGSQGLSVVGYYHANERFDDLELGNVAKKIGDHIYRYFPQVSVLLLDNK 393
           LEI+LI IEE++G++ L +VGY+HANER DD+ELGNVAK IGDHIYRYFPQ ++LLLDNK
Sbjct: 64  LEISLIMIEEYYGARDLGIVGYFHANERSDDVELGNVAKNIGDHIYRYFPQAAILLLDNK 123

Query: 394 KLESLIKGKDRNPVVQLYTRDLSKNWKQAGSGGSGSLTLKEPSANIVLLDYIVSQKWEGV 573
           KLE+L KGKDR PV+QLYTRD SKNWK AGS G   LT KEP+AN VLLDYI S+KWE V
Sbjct: 124 KLEALPKGKDRLPVMQLYTRDASKNWKLAGSDGGCQLTTKEPAANAVLLDYISSKKWEDV 183

Query: 574 VDFDDHLDDISKDWLNPDLFK 636
           VDFDDHLDDI+KDWLNP+LFK
Sbjct: 184 VDFDDHLDDITKDWLNPELFK 204


>ref|XP_002300389.1| predicted protein [Populus trichocarpa] gi|222847647|gb|EEE85194.1|
           predicted protein [Populus trichocarpa]
          Length = 204

 Score =  298 bits (762), Expect = 1e-78
 Identities = 144/201 (71%), Positives = 170/201 (84%)
 Frame = +1

Query: 34  GGELKYEIGQNAYIKLVLHALKHKASAVNGVLIGRLIKDEVVEISDAVPLSHSHIGLVPT 213
           GGEL+YEI QNAYIKLVLH+LKHK SAVNGV +G    D+ V+I D+VPL H+H+GL+P 
Sbjct: 5   GGELRYEISQNAYIKLVLHSLKHKTSAVNGVFVGSSC-DDGVQIIDSVPLFHNHLGLLPP 63

Query: 214 LEIALIQIEEHFGSQGLSVVGYYHANERFDDLELGNVAKKIGDHIYRYFPQVSVLLLDNK 393
           LEI+LI IEE++ ++GL +VGY+HANER DD+ELGNVAK IGDHIYRYFPQ ++LLLDNK
Sbjct: 64  LEISLIMIEEYYSARGLGIVGYFHANERSDDVELGNVAKNIGDHIYRYFPQAAILLLDNK 123

Query: 394 KLESLIKGKDRNPVVQLYTRDLSKNWKQAGSGGSGSLTLKEPSANIVLLDYIVSQKWEGV 573
           KLE+L KGKD  PV+QLYTRD SKNWK AGS     LT KEP+AN VLLDYI S+KWE V
Sbjct: 124 KLEALPKGKDGLPVMQLYTRDASKNWKLAGSDVGCRLTTKEPAANAVLLDYISSKKWEDV 183

Query: 574 VDFDDHLDDISKDWLNPDLFK 636
           VDFDDHLDDI++DWLNP+LFK
Sbjct: 184 VDFDDHLDDITRDWLNPELFK 204


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