BLASTX nr result

ID: Coptis24_contig00007951 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00007951
         (1005 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN76309.1| hypothetical protein VITISV_028333 [Vitis vinifera]   289   8e-76
ref|XP_002269977.2| PREDICTED: histidine kinase 2-like [Vitis vi...   288   1e-75
emb|CBI28424.3| unnamed protein product [Vitis vinifera]              288   1e-75
ref|XP_002321181.1| histidine kinase cytokinin receptor [Populus...   280   5e-73
ref|XP_002531702.1| histidine kinase 1, 2, 3 plant, putative [Ri...   273   4e-71

>emb|CAN76309.1| hypothetical protein VITISV_028333 [Vitis vinifera]
          Length = 1400

 Score =  289 bits (739), Expect = 8e-76
 Identities = 148/244 (60%), Positives = 182/244 (74%), Gaps = 1/244 (0%)
 Frame = +1

Query: 16   MVLVDKDGWDEETTLALPHLLKELYQSLRNKSSEYCPKIILLATT-SSSELDEFKSAGFV 192
            MVLVDK+ WD+E  L   H+LKEL  +   +  E  PKI LL T+ SS+E +E KSAGFV
Sbjct: 1067 MVLVDKEVWDKEAGLVFHHMLKELRPNGTVEVQEKRPKIFLLDTSLSSAERNELKSAGFV 1126

Query: 193  DDVITKPLRLSMLVTCFQQVLGSGTRKQLNKVKPTVLERLLNGKQILXXXXXXXXXXXAE 372
            D+V+ KPLRLS+L++CFQ+V G G RKQ N+ KP  L  LL  K+IL           AE
Sbjct: 1127 DNVLMKPLRLSVLISCFQEVFGIGKRKQANRGKPLTLGNLLREKRILVVDDNAVNRRVAE 1186

Query: 373  GALLKYGAKVTCVESGKASIEMLLPPHNFDACFMDLQMPEMDGFEATRQIRCIENEVNET 552
             AL KYGA VTCV+SGKA++ ML PPHNFDACFMDLQMPEMDGF+AT++IR +E++VNE 
Sbjct: 1187 FALKKYGAIVTCVDSGKAALLMLKPPHNFDACFMDLQMPEMDGFKATQEIRRMESKVNER 1246

Query: 553  LHLAGTSSETFGNVVHWHTPILAMTADLIQATHEKCMKCGMDGYVSKPFEEEQLYLALRH 732
            +     S E F NV +WHTPILAMTAD+IQA +E+CMKCGMDGYV+KPFEE+QLY A+ H
Sbjct: 1247 IKSGEVSIEMFANVAYWHTPILAMTADVIQANNEECMKCGMDGYVAKPFEEDQLYSAVAH 1306

Query: 733  FFDS 744
            FF+S
Sbjct: 1307 FFES 1310


>ref|XP_002269977.2| PREDICTED: histidine kinase 2-like [Vitis vinifera]
          Length = 1272

 Score =  288 bits (738), Expect = 1e-75
 Identities = 148/244 (60%), Positives = 181/244 (74%), Gaps = 1/244 (0%)
 Frame = +1

Query: 16   MVLVDKDGWDEETTLALPHLLKELYQSLRNKSSEYCPKIILLATT-SSSELDEFKSAGFV 192
            MVLVDK+ WD+E  L   H+LKEL  +   +  E  PKI LL T+ SS+E +E KSAGFV
Sbjct: 1028 MVLVDKEVWDKEAGLVFHHMLKELRPNGTVEVQEKRPKIFLLDTSLSSAERNELKSAGFV 1087

Query: 193  DDVITKPLRLSMLVTCFQQVLGSGTRKQLNKVKPTVLERLLNGKQILXXXXXXXXXXXAE 372
            D+V+ KPLRLS+L++CFQ+V G G RKQ N+ KP  L  LL  K+IL           AE
Sbjct: 1088 DNVLMKPLRLSVLISCFQEVFGIGKRKQANRGKPLTLGNLLREKRILVVDDNAVNRRVAE 1147

Query: 373  GALLKYGAKVTCVESGKASIEMLLPPHNFDACFMDLQMPEMDGFEATRQIRCIENEVNET 552
             AL KYGA VTCV+SGKA++ ML PPHNFDACFMDLQMPEMDGF AT++IR +E++VNE 
Sbjct: 1148 FALKKYGAIVTCVDSGKAALLMLKPPHNFDACFMDLQMPEMDGFRATQEIRRMESKVNER 1207

Query: 553  LHLAGTSSETFGNVVHWHTPILAMTADLIQATHEKCMKCGMDGYVSKPFEEEQLYLALRH 732
            +     S E F NV +WHTPILAMTAD+IQA +E+CMKCGMDGYV+KPFEE+QLY A+ H
Sbjct: 1208 IKSGEVSIEMFANVAYWHTPILAMTADVIQANNEECMKCGMDGYVAKPFEEDQLYSAVAH 1267

Query: 733  FFDS 744
            FF+S
Sbjct: 1268 FFES 1271


>emb|CBI28424.3| unnamed protein product [Vitis vinifera]
          Length = 1203

 Score =  288 bits (738), Expect = 1e-75
 Identities = 148/244 (60%), Positives = 181/244 (74%), Gaps = 1/244 (0%)
 Frame = +1

Query: 16   MVLVDKDGWDEETTLALPHLLKELYQSLRNKSSEYCPKIILLATT-SSSELDEFKSAGFV 192
            MVLVDK+ WD+E  L   H+LKEL  +   +  E  PKI LL T+ SS+E +E KSAGFV
Sbjct: 959  MVLVDKEVWDKEAGLVFHHMLKELRPNGTVEVQEKRPKIFLLDTSLSSAERNELKSAGFV 1018

Query: 193  DDVITKPLRLSMLVTCFQQVLGSGTRKQLNKVKPTVLERLLNGKQILXXXXXXXXXXXAE 372
            D+V+ KPLRLS+L++CFQ+V G G RKQ N+ KP  L  LL  K+IL           AE
Sbjct: 1019 DNVLMKPLRLSVLISCFQEVFGIGKRKQANRGKPLTLGNLLREKRILVVDDNAVNRRVAE 1078

Query: 373  GALLKYGAKVTCVESGKASIEMLLPPHNFDACFMDLQMPEMDGFEATRQIRCIENEVNET 552
             AL KYGA VTCV+SGKA++ ML PPHNFDACFMDLQMPEMDGF AT++IR +E++VNE 
Sbjct: 1079 FALKKYGAIVTCVDSGKAALLMLKPPHNFDACFMDLQMPEMDGFRATQEIRRMESKVNER 1138

Query: 553  LHLAGTSSETFGNVVHWHTPILAMTADLIQATHEKCMKCGMDGYVSKPFEEEQLYLALRH 732
            +     S E F NV +WHTPILAMTAD+IQA +E+CMKCGMDGYV+KPFEE+QLY A+ H
Sbjct: 1139 IKSGEVSIEMFANVAYWHTPILAMTADVIQANNEECMKCGMDGYVAKPFEEDQLYSAVAH 1198

Query: 733  FFDS 744
            FF+S
Sbjct: 1199 FFES 1202


>ref|XP_002321181.1| histidine kinase cytokinin receptor [Populus trichocarpa]
            gi|222861954|gb|EEE99496.1| histidine kinase cytokinin
            receptor [Populus trichocarpa]
          Length = 1234

 Score =  280 bits (715), Expect = 5e-73
 Identities = 142/244 (58%), Positives = 177/244 (72%), Gaps = 1/244 (0%)
 Frame = +1

Query: 10   LHMVLVDKDGWDEETTLALPHLLKELYQSLRNKSSEYCPKIILLATT-SSSELDEFKSAG 186
            L +VL+DKD WD+E+ +A  HLLK   ++          KI LLATT SS E  E K++G
Sbjct: 991  LPIVLIDKDAWDKESGIAFHHLLKMPKKNDGTDIQVDLSKIFLLATTISSDERLELKTSG 1050

Query: 187  FVDDVITKPLRLSMLVTCFQQVLGSGTRKQLNKVKPTVLERLLNGKQILXXXXXXXXXXX 366
             VD+V+ KPLRLS+L+ CFQ+  GSG + ++N+ KP  L+ LL GKQIL           
Sbjct: 1051 LVDNVLVKPLRLSVLIACFQEAFGSGKKSEVNRKKPPALQNLLRGKQILVVDDNLVNRRV 1110

Query: 367  AEGALLKYGAKVTCVESGKASIEMLLPPHNFDACFMDLQMPEMDGFEATRQIRCIENEVN 546
            AEGAL K+GA VTCVESGKA++E L PPH+FDACFMD QMPEMDGFEATRQIR +E++ N
Sbjct: 1111 AEGALKKHGAIVTCVESGKAALEKLKPPHSFDACFMDFQMPEMDGFEATRQIRSMESQFN 1170

Query: 547  ETLHLAGTSSETFGNVVHWHTPILAMTADLIQATHEKCMKCGMDGYVSKPFEEEQLYLAL 726
            E +     S E  GNV +WHTPILAMTAD+IQAT+E+C+KCGMDGYVSKPFE+E+LY A+
Sbjct: 1171 EKIASGKASMELPGNVAYWHTPILAMTADVIQATNEECLKCGMDGYVSKPFEDEKLYNAV 1230

Query: 727  RHFF 738
              FF
Sbjct: 1231 TRFF 1234


>ref|XP_002531702.1| histidine kinase 1, 2, 3 plant, putative [Ricinus communis]
            gi|223528678|gb|EEF30693.1| histidine kinase 1, 2, 3
            plant, putative [Ricinus communis]
          Length = 922

 Score =  273 bits (699), Expect = 4e-71
 Identities = 141/244 (57%), Positives = 171/244 (70%), Gaps = 1/244 (0%)
 Frame = +1

Query: 16   MVLVDKDGWDEETTLALPHLLKELYQSLRNKSSEYCPKIILLATT-SSSELDEFKSAGFV 192
            +VL+DKD W  ET  A   LLKE  Q+   +     PKI LLATT +  E  E  SAG V
Sbjct: 678  LVLIDKDAWHNETGFAFRQLLKESKQNGGTEMIIDLPKIFLLATTINPEERRELLSAGLV 737

Query: 193  DDVITKPLRLSMLVTCFQQVLGSGTRKQLNKVKPTVLERLLNGKQILXXXXXXXXXXXAE 372
            D++I KPLRLS+L +CFQ+ +GSG + Q+N+ KP+ L+ LL  K+IL           AE
Sbjct: 738  DNIIMKPLRLSVLFSCFQEAIGSGKKSQVNRRKPSTLQNLLREKRILVVDDNKVNRRVAE 797

Query: 373  GALLKYGAKVTCVESGKASIEMLLPPHNFDACFMDLQMPEMDGFEATRQIRCIENEVNET 552
            GAL KYGA VTCVESGK ++E+L PPH FDACFMD  MPE+DGFEATRQIR  E + NE 
Sbjct: 798  GALKKYGAIVTCVESGKEALELLKPPHTFDACFMDRHMPELDGFEATRQIRARERQFNEQ 857

Query: 553  LHLAGTSSETFGNVVHWHTPILAMTADLIQATHEKCMKCGMDGYVSKPFEEEQLYLALRH 732
            +     S E FGNV +WHTPILAMTAD+IQAT+E+C KCGMD +VSKPFEEEQLY A+  
Sbjct: 858  IASGEVSMEMFGNVAYWHTPILAMTADVIQATNEECRKCGMDDFVSKPFEEEQLYNAVAP 917

Query: 733  FFDS 744
            FF+S
Sbjct: 918  FFES 921


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