BLASTX nr result

ID: Coptis24_contig00007946 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00007946
         (1472 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAC43323.1| putative alpha7 proteasome subunit [Nicotiana ta...   111   6e-22
gb|ABK22658.1| unknown [Picea sitchensis]                             108   5e-21
ref|XP_002299648.1| predicted protein [Populus trichocarpa] gi|1...   107   6e-21
ref|NP_001241123.1| uncharacterized protein LOC100820387 [Glycin...   107   8e-21
ref|XP_004165214.1| PREDICTED: proteasome subunit alpha type-3-l...   107   1e-20

>emb|CAC43323.1| putative alpha7 proteasome subunit [Nicotiana tabacum]
          Length = 249

 Score =  111 bits (277), Expect = 6e-22
 Identities = 62/101 (61%), Positives = 67/101 (66%), Gaps = 28/101 (27%)
 Frame = +3

Query: 363 YDLSVTTFSPDGRVFQIEYASKAVDNSGTVIGIKCKDGIV-------------------- 482
           YDLSVTTFSPDGRVFQIEYA KAVDNSGTV+GIKCKDGIV                    
Sbjct: 8   YDLSVTTFSPDGRVFQIEYAGKAVDNSGTVVGIKCKDGIVLGVEKLIASKMMLPGSNRRI 67

Query: 483 --------MSVAGLAADGRQIVVRTKSEATNYERSLKELLM 581
                   M+VAGLAADGRQIV RTKSEATNYE +  E ++
Sbjct: 68  HSVHRHSGMAVAGLAADGRQIVARTKSEATNYESTYGEPIL 108


>gb|ABK22658.1| unknown [Picea sitchensis]
          Length = 249

 Score =  108 bits (269), Expect = 5e-21
 Identities = 61/98 (62%), Positives = 65/98 (66%), Gaps = 28/98 (28%)
 Frame = +3

Query: 363 YDLSVTTFSPDGRVFQIEYASKAVDNSGTVIGIKCKDGIV-------------------- 482
           YDLSVTTFSPDGRVFQIEYA+KAVDNSGTVIGIKCKDGIV                    
Sbjct: 8   YDLSVTTFSPDGRVFQIEYATKAVDNSGTVIGIKCKDGIVLGVEKLIASKMLLEGSNRRI 67

Query: 483 --------MSVAGLAADGRQIVVRTKSEATNYERSLKE 572
                   M+VAGLAADGRQIV R KSEAT+YE +  E
Sbjct: 68  HAVHNHAGMAVAGLAADGRQIVARAKSEATSYENTYGE 105


>ref|XP_002299648.1| predicted protein [Populus trichocarpa] gi|118488197|gb|ABK95918.1|
           unknown [Populus trichocarpa]
           gi|222846906|gb|EEE84453.1| predicted protein [Populus
           trichocarpa]
          Length = 249

 Score =  107 bits (268), Expect = 6e-21
 Identities = 60/93 (64%), Positives = 63/93 (67%), Gaps = 28/93 (30%)
 Frame = +3

Query: 363 YDLSVTTFSPDGRVFQIEYASKAVDNSGTVIGIKCKDGIV-------------------- 482
           YDLSVTTFSPDGRVFQIEYA+KAVDNSGTVIGIKCKDGIV                    
Sbjct: 8   YDLSVTTFSPDGRVFQIEYAAKAVDNSGTVIGIKCKDGIVMGVEKLIASKMMLPGSNRRI 67

Query: 483 --------MSVAGLAADGRQIVVRTKSEATNYE 557
                   M+VAGLAADGRQIV R KSEATNY+
Sbjct: 68  HAVHRHSGMAVAGLAADGRQIVARAKSEATNYQ 100


>ref|NP_001241123.1| uncharacterized protein LOC100820387 [Glycine max]
           gi|255641143|gb|ACU20849.1| unknown [Glycine max]
          Length = 249

 Score =  107 bits (267), Expect = 8e-21
 Identities = 59/93 (63%), Positives = 63/93 (67%), Gaps = 28/93 (30%)
 Frame = +3

Query: 363 YDLSVTTFSPDGRVFQIEYASKAVDNSGTVIGIKCKDGIV-------------------- 482
           YDLSVTTFSPDGRVFQIEYA+KAVDNSGTVIGIKCKDG+V                    
Sbjct: 8   YDLSVTTFSPDGRVFQIEYAAKAVDNSGTVIGIKCKDGVVLGVEKLIPSKMMLPGSNRRI 67

Query: 483 --------MSVAGLAADGRQIVVRTKSEATNYE 557
                   M+VAGLAADGRQIV R KSEATNY+
Sbjct: 68  HSVHRHSGMAVAGLAADGRQIVARAKSEATNYD 100


>ref|XP_004165214.1| PREDICTED: proteasome subunit alpha type-3-like [Cucumis sativus]
          Length = 228

 Score =  107 bits (266), Expect = 1e-20
 Identities = 59/93 (63%), Positives = 63/93 (67%), Gaps = 28/93 (30%)
 Frame = +3

Query: 363 YDLSVTTFSPDGRVFQIEYASKAVDNSGTVIGIKCKDGIV-------------------- 482
           YDLSVTTFSPDGRVFQIEYA+KAVDNSGTVIGIKCKDG+V                    
Sbjct: 8   YDLSVTTFSPDGRVFQIEYAAKAVDNSGTVIGIKCKDGVVMGVEKLITSKMMLPGSNRRI 67

Query: 483 --------MSVAGLAADGRQIVVRTKSEATNYE 557
                   M+VAGLAADGRQIV R KSEA+NYE
Sbjct: 68  HAIHRHSGMAVAGLAADGRQIVARAKSEASNYE 100


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