BLASTX nr result
ID: Coptis24_contig00007946
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00007946 (1472 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAC43323.1| putative alpha7 proteasome subunit [Nicotiana ta... 111 6e-22 gb|ABK22658.1| unknown [Picea sitchensis] 108 5e-21 ref|XP_002299648.1| predicted protein [Populus trichocarpa] gi|1... 107 6e-21 ref|NP_001241123.1| uncharacterized protein LOC100820387 [Glycin... 107 8e-21 ref|XP_004165214.1| PREDICTED: proteasome subunit alpha type-3-l... 107 1e-20 >emb|CAC43323.1| putative alpha7 proteasome subunit [Nicotiana tabacum] Length = 249 Score = 111 bits (277), Expect = 6e-22 Identities = 62/101 (61%), Positives = 67/101 (66%), Gaps = 28/101 (27%) Frame = +3 Query: 363 YDLSVTTFSPDGRVFQIEYASKAVDNSGTVIGIKCKDGIV-------------------- 482 YDLSVTTFSPDGRVFQIEYA KAVDNSGTV+GIKCKDGIV Sbjct: 8 YDLSVTTFSPDGRVFQIEYAGKAVDNSGTVVGIKCKDGIVLGVEKLIASKMMLPGSNRRI 67 Query: 483 --------MSVAGLAADGRQIVVRTKSEATNYERSLKELLM 581 M+VAGLAADGRQIV RTKSEATNYE + E ++ Sbjct: 68 HSVHRHSGMAVAGLAADGRQIVARTKSEATNYESTYGEPIL 108 >gb|ABK22658.1| unknown [Picea sitchensis] Length = 249 Score = 108 bits (269), Expect = 5e-21 Identities = 61/98 (62%), Positives = 65/98 (66%), Gaps = 28/98 (28%) Frame = +3 Query: 363 YDLSVTTFSPDGRVFQIEYASKAVDNSGTVIGIKCKDGIV-------------------- 482 YDLSVTTFSPDGRVFQIEYA+KAVDNSGTVIGIKCKDGIV Sbjct: 8 YDLSVTTFSPDGRVFQIEYATKAVDNSGTVIGIKCKDGIVLGVEKLIASKMLLEGSNRRI 67 Query: 483 --------MSVAGLAADGRQIVVRTKSEATNYERSLKE 572 M+VAGLAADGRQIV R KSEAT+YE + E Sbjct: 68 HAVHNHAGMAVAGLAADGRQIVARAKSEATSYENTYGE 105 >ref|XP_002299648.1| predicted protein [Populus trichocarpa] gi|118488197|gb|ABK95918.1| unknown [Populus trichocarpa] gi|222846906|gb|EEE84453.1| predicted protein [Populus trichocarpa] Length = 249 Score = 107 bits (268), Expect = 6e-21 Identities = 60/93 (64%), Positives = 63/93 (67%), Gaps = 28/93 (30%) Frame = +3 Query: 363 YDLSVTTFSPDGRVFQIEYASKAVDNSGTVIGIKCKDGIV-------------------- 482 YDLSVTTFSPDGRVFQIEYA+KAVDNSGTVIGIKCKDGIV Sbjct: 8 YDLSVTTFSPDGRVFQIEYAAKAVDNSGTVIGIKCKDGIVMGVEKLIASKMMLPGSNRRI 67 Query: 483 --------MSVAGLAADGRQIVVRTKSEATNYE 557 M+VAGLAADGRQIV R KSEATNY+ Sbjct: 68 HAVHRHSGMAVAGLAADGRQIVARAKSEATNYQ 100 >ref|NP_001241123.1| uncharacterized protein LOC100820387 [Glycine max] gi|255641143|gb|ACU20849.1| unknown [Glycine max] Length = 249 Score = 107 bits (267), Expect = 8e-21 Identities = 59/93 (63%), Positives = 63/93 (67%), Gaps = 28/93 (30%) Frame = +3 Query: 363 YDLSVTTFSPDGRVFQIEYASKAVDNSGTVIGIKCKDGIV-------------------- 482 YDLSVTTFSPDGRVFQIEYA+KAVDNSGTVIGIKCKDG+V Sbjct: 8 YDLSVTTFSPDGRVFQIEYAAKAVDNSGTVIGIKCKDGVVLGVEKLIPSKMMLPGSNRRI 67 Query: 483 --------MSVAGLAADGRQIVVRTKSEATNYE 557 M+VAGLAADGRQIV R KSEATNY+ Sbjct: 68 HSVHRHSGMAVAGLAADGRQIVARAKSEATNYD 100 >ref|XP_004165214.1| PREDICTED: proteasome subunit alpha type-3-like [Cucumis sativus] Length = 228 Score = 107 bits (266), Expect = 1e-20 Identities = 59/93 (63%), Positives = 63/93 (67%), Gaps = 28/93 (30%) Frame = +3 Query: 363 YDLSVTTFSPDGRVFQIEYASKAVDNSGTVIGIKCKDGIV-------------------- 482 YDLSVTTFSPDGRVFQIEYA+KAVDNSGTVIGIKCKDG+V Sbjct: 8 YDLSVTTFSPDGRVFQIEYAAKAVDNSGTVIGIKCKDGVVMGVEKLITSKMMLPGSNRRI 67 Query: 483 --------MSVAGLAADGRQIVVRTKSEATNYE 557 M+VAGLAADGRQIV R KSEA+NYE Sbjct: 68 HAIHRHSGMAVAGLAADGRQIVARAKSEASNYE 100