BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00007937
         (2342 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003524614.1| PREDICTED: SWI/SNF complex component SNF12 h...   676   0.0  
ref|XP_002273749.1| PREDICTED: SWI/SNF complex component SNF12 h...   673   0.0  
emb|CAN60756.1| hypothetical protein VITISV_041986 [Vitis vinifera]   671   0.0  
ref|XP_004145668.1| PREDICTED: SWI/SNF complex component SNF12 h...   667   0.0  
ref|XP_002298619.1| chromatin remodeling complex subunit [Populu...   663   0.0  

>ref|XP_003524614.1| PREDICTED: SWI/SNF complex component SNF12 homolog [Glycine max]
          Length = 543

 Score =  676 bits (1745), Expect = 0.0
 Identities = 352/548 (64%), Positives = 408/548 (74%), Gaps = 5/548 (0%)
 Frame = -3

Query: 2244 MSANNNNHTTNMGGPSPLGNNSGMMSSNIPMNHPMHPRGQDGSH----FQGQFQSPL-RT 2080
            MS NNNN +  +G  S    N+G+ S++IP N P   + Q  +     FQGQF  PL + 
Sbjct: 1    MSVNNNNPSKGIGASSSTFGNAGIPSNSIPSN-PGFSQSQGQAQIPVGFQGQF--PLSQA 57

Query: 2079 QTLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASSPSLSTPGTASG 1900
              +                                            SSPS+STPG ASG
Sbjct: 58   HAIVQAQSKAQAQAQAQAAAAAHAQLQAHLQAQGLSLNQNQAGGLGVSSPSISTPGNASG 117

Query: 1899 GAKRVNQKXXXXXXXXXXXNSVSSFKTMELTPAARRKKRKLPEKQLPDRVAALLPESALY 1720
              KR+  K           NS S  + MELTPAARRKK+KLPEKQL D+VAA+LPESALY
Sbjct: 118  --KRIPMKPPMRPVGFSPPNSFSPLRPMELTPAARRKKQKLPEKQLQDKVAAILPESALY 175

Query: 1719 TQLLEFEARVDAGLARKKIDIQESLKNPPCIQKTLRLYVFNTYANQIRSIPERQNTEPPS 1540
            TQLLEFE+RVDA LARKK DIQE+LKNPPCIQKTLR+YVFNT+ANQIR+IP++ N EPP+
Sbjct: 176  TQLLEFESRVDAALARKKADIQEALKNPPCIQKTLRIYVFNTFANQIRTIPKKPNVEPPT 235

Query: 1539 WSLKIIGRILEDGVDPDSGGMIQKPNALYPKFSSFFKKISIALDHSLYPENATITWESAR 1360
            W+LKI+GRILEDGVDPD  G++QK + LYPKFS+FFK+++I+LD  LYP+N  I WE+AR
Sbjct: 236  WTLKIVGRILEDGVDPDQPGVVQKSSPLYPKFSAFFKRVTISLDQRLYPDNHIILWENAR 295

Query: 1359 SAAPHEGFEIKRKGDKEFTAGIRLEMNYIPEKFKLSPPLMDVLAIEVDTRARVIAAIWHY 1180
            S APHEGFE+KRKGDKEFT  IRLEMNY+PEKFKLSP L +VL IEVDTR R++AAIWHY
Sbjct: 296  SPAPHEGFEVKRKGDKEFTVNIRLEMNYVPEKFKLSPALTEVLGIEVDTRPRIVAAIWHY 355

Query: 1179 VKARKLQDPSDPAFFKCDPPLRKVFGEERMKFAMVSQKISPHLAPPQPIHLEHKIRLSGN 1000
            VKARKLQ+P+DP++F CDPPL+KVFGEE MKF MVSQKIS HL PPQPI LEHKI+LSGN
Sbjct: 356  VKARKLQNPNDPSYFHCDPPLQKVFGEENMKFTMVSQKISSHLFPPQPILLEHKIKLSGN 415

Query: 999  NPAGSACYDVLVDVPFPLQKEMSAFLANTEKHKXXXXXXXXXXXXXXXIHEHRRRRAFFL 820
            +PAG+ACYDV+VDVPFP+Q+E+SA LAN EK+K               IHEHRRRRAFFL
Sbjct: 416  SPAGTACYDVMVDVPFPIQRELSALLANVEKNKDIETCDEAICGIIRKIHEHRRRRAFFL 475

Query: 819  GFSQSPVEFINALIASQSRDLKLVAGEASRNAEKERRSDFYNQPWVEDAVIRYLNRKPAA 640
            GFSQSPVEFINALI SQSRDLKLV+GE SRNAEKERRSDF+NQPWVEDAVIRYLNRKPAA
Sbjct: 476  GFSQSPVEFINALIESQSRDLKLVSGEPSRNAEKERRSDFFNQPWVEDAVIRYLNRKPAA 535

Query: 639  GSDAPGST 616
            GSDAPGST
Sbjct: 536  GSDAPGST 543


>ref|XP_002273749.1| PREDICTED: SWI/SNF complex component SNF12 homolog [Vitis vinifera]
          Length = 548

 Score =  673 bits (1737), Expect = 0.0
 Identities = 348/551 (63%), Positives = 400/551 (72%), Gaps = 8/551 (1%)
 Frame = -3

Query: 2244 MSANNNNHTTNMGGPSPLGNNSGMMSSNIPMNHPMHPRGQDGSHFQGQFQSPLRTQTLNX 2065
            M+ NNNN   N+G  S    N+GM S  +P N P+  + Q      G FQ   +    + 
Sbjct: 1    MAVNNNNPPKNLGASSSPFGNAGMGSPAMPAN-PVFSQPQAQGQIGGGFQGQFQLSQAHQ 59

Query: 2064 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA--------SSPSLSTPGT 1909
                                                              SSPS+  PG 
Sbjct: 60   AHVIAQAHSKAQAHAQAQAQAAHAQFQAQLQAQGMTLNQSQGIGIGNMGGSSPSIGAPGN 119

Query: 1908 ASGGAKRVNQKXXXXXXXXXXXNSVSSFKTMELTPAARRKKRKLPEKQLPDRVAALLPES 1729
            ++   KR  QK           N++S  K MELTPAARRKK+KLPEKQL DRVAA+LPES
Sbjct: 120  SN--MKRTLQKPPVRPPGPLGANTISPLKVMELTPAARRKKQKLPEKQLQDRVAAILPES 177

Query: 1728 ALYTQLLEFEARVDAGLARKKIDIQESLKNPPCIQKTLRLYVFNTYANQIRSIPERQNTE 1549
            ALYTQLLEFE+RVDA LARKKIDIQE+LKNPPC+QKTLR+Y+FNT+ANQIR+IP++ N E
Sbjct: 178  ALYTQLLEFESRVDAALARKKIDIQEALKNPPCVQKTLRIYIFNTFANQIRTIPKKPNAE 237

Query: 1548 PPSWSLKIIGRILEDGVDPDSGGMIQKPNALYPKFSSFFKKISIALDHSLYPENATITWE 1369
            PP+W+LKIIGRILE+GVDPD   M+ K N  YPKFSSFFK+++I+LD  LYP+N  I WE
Sbjct: 238  PPTWTLKIIGRILEEGVDPDQAAMLHKSNVSYPKFSSFFKRVTISLDQRLYPDNPIIIWE 297

Query: 1368 SARSAAPHEGFEIKRKGDKEFTAGIRLEMNYIPEKFKLSPPLMDVLAIEVDTRARVIAAI 1189
            +ARS APHEGFE+KRKGDKEFT  IRLEMNY+PEKFKLS  LM+VL IEVDTR R+IAAI
Sbjct: 298  NARSPAPHEGFEVKRKGDKEFTVNIRLEMNYVPEKFKLSSALMEVLGIEVDTRPRIIAAI 357

Query: 1188 WHYVKARKLQDPSDPAFFKCDPPLRKVFGEERMKFAMVSQKISPHLAPPQPIHLEHKIRL 1009
            WHYVKARKLQ+P+DP+FF CDPPL+KVFGE++MKF MVSQKIS HL+PPQPIHLEHKI+L
Sbjct: 358  WHYVKARKLQNPNDPSFFNCDPPLQKVFGEDKMKFTMVSQKISQHLSPPQPIHLEHKIKL 417

Query: 1008 SGNNPAGSACYDVLVDVPFPLQKEMSAFLANTEKHKXXXXXXXXXXXXXXXIHEHRRRRA 829
            SGN PAG+ACYDVLVDVPFP+QKE+SA LANTEK+K               IHEHRRRRA
Sbjct: 418  SGNCPAGNACYDVLVDVPFPIQKELSALLANTEKNKEIDACDEAICSAIRKIHEHRRRRA 477

Query: 828  FFLGFSQSPVEFINALIASQSRDLKLVAGEASRNAEKERRSDFYNQPWVEDAVIRYLNRK 649
            FFLGFSQSPVEFIN LI SQS+DLKLVAGEASRNAEKERRSDF+NQPWVEDAVIRYLNRK
Sbjct: 478  FFLGFSQSPVEFINTLIESQSKDLKLVAGEASRNAEKERRSDFFNQPWVEDAVIRYLNRK 537

Query: 648  PAAGSDAPGST 616
            P AGSDAPGST
Sbjct: 538  PVAGSDAPGST 548


>emb|CAN60756.1| hypothetical protein VITISV_041986 [Vitis vinifera]
          Length = 548

 Score =  671 bits (1731), Expect = 0.0
 Identities = 347/551 (62%), Positives = 399/551 (72%), Gaps = 8/551 (1%)
 Frame = -3

Query: 2244 MSANNNNHTTNMGGPSPLGNNSGMMSSNIPMNHPMHPRGQDGSHFQGQFQSPLRTQTLNX 2065
            M+ NNNN   N+G  S    N+GM S  +P N P+  + Q      G FQ   +    + 
Sbjct: 1    MAVNNNNPPKNLGASSSPFGNAGMGSPAMPAN-PVFSQPQAQGQIGGGFQGQFQLSQAHQ 59

Query: 2064 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA--------SSPSLSTPGT 1909
                                                              SSPS+  PG 
Sbjct: 60   AHVIAQAHSKAQAHAQAQAQAAHAQFQAQLQAQGMTLNQSQGIGIGNMGGSSPSIGAPGN 119

Query: 1908 ASGGAKRVNQKXXXXXXXXXXXNSVSSFKTMELTPAARRKKRKLPEKQLPDRVAALLPES 1729
            ++   KR  QK           N++S  K MELTPAARRKK+KLPEKQL DRVAA+LPES
Sbjct: 120  SN--MKRXLQKPPVRPPGPLGANTISPLKVMELTPAARRKKQKLPEKQLQDRVAAILPES 177

Query: 1728 ALYTQLLEFEARVDAGLARKKIDIQESLKNPPCIQKTLRLYVFNTYANQIRSIPERQNTE 1549
            ALYTQLLEFE+RVDA LARKKIDIQE+LKNPPC+QKTLR+Y+FNT+ NQIR+IP++ N E
Sbjct: 178  ALYTQLLEFESRVDAALARKKIDIQEALKNPPCVQKTLRIYIFNTFXNQIRTIPKKPNAE 237

Query: 1548 PPSWSLKIIGRILEDGVDPDSGGMIQKPNALYPKFSSFFKKISIALDHSLYPENATITWE 1369
            PP+W+LKIIGRILE+GVDPD   M+ K N  YPKFSSFFK+++I+LD  LYP+N  I WE
Sbjct: 238  PPTWTLKIIGRILEEGVDPDQAAMLHKSNVSYPKFSSFFKRVTISLDQRLYPDNPIIIWE 297

Query: 1368 SARSAAPHEGFEIKRKGDKEFTAGIRLEMNYIPEKFKLSPPLMDVLAIEVDTRARVIAAI 1189
            +ARS APHEGFE+KRKGDKEFT  IRLEMNY+PEKFKLS  LM+VL IEVDTR R+IAAI
Sbjct: 298  NARSPAPHEGFEVKRKGDKEFTVNIRLEMNYVPEKFKLSSALMEVLGIEVDTRPRIIAAI 357

Query: 1188 WHYVKARKLQDPSDPAFFKCDPPLRKVFGEERMKFAMVSQKISPHLAPPQPIHLEHKIRL 1009
            WHYVKARKLQ+P+DP+FF CDPPL+KVFGE++MKF MVSQKIS HL+PPQPIHLEHKI+L
Sbjct: 358  WHYVKARKLQNPNDPSFFNCDPPLQKVFGEDKMKFTMVSQKISQHLSPPQPIHLEHKIKL 417

Query: 1008 SGNNPAGSACYDVLVDVPFPLQKEMSAFLANTEKHKXXXXXXXXXXXXXXXIHEHRRRRA 829
            SGN PAG+ACYDVLVDVPFP+QKE+SA LANTEK+K               IHEHRRRRA
Sbjct: 418  SGNCPAGNACYDVLVDVPFPIQKELSALLANTEKNKEIDACDEAICSAIRKIHEHRRRRA 477

Query: 828  FFLGFSQSPVEFINALIASQSRDLKLVAGEASRNAEKERRSDFYNQPWVEDAVIRYLNRK 649
            FFLGFSQSPVEFIN LI SQS+DLKLVAGEASRNAEKERRSDF+NQPWVEDAVIRYLNRK
Sbjct: 478  FFLGFSQSPVEFINTLIESQSKDLKLVAGEASRNAEKERRSDFFNQPWVEDAVIRYLNRK 537

Query: 648  PAAGSDAPGST 616
            P AGSDAPGST
Sbjct: 538  PVAGSDAPGST 548


>ref|XP_004145668.1| PREDICTED: SWI/SNF complex component SNF12 homolog [Cucumis sativus]
            gi|449515744|ref|XP_004164908.1| PREDICTED: SWI/SNF
            complex component SNF12 homolog [Cucumis sativus]
          Length = 547

 Score =  667 bits (1722), Expect = 0.0
 Identities = 347/552 (62%), Positives = 407/552 (73%), Gaps = 9/552 (1%)
 Frame = -3

Query: 2244 MSANNNNHTTNMGGPS--PLGNNSGMMSSNIPMNHPM----HPRGQDGSHFQGQFQSPLR 2083
            MS NNNN    +GG S  P GN SGM+  ++  N        P+ Q G+ FQ  F  PL 
Sbjct: 1    MSMNNNNPPKTLGGASSSPFGN-SGMVPPSMAANSTSFSQPQPQAQLGAGFQNPF--PLT 57

Query: 2082 T-QTLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASSPS--LSTPG 1912
            T Q L                                             SPS   STPG
Sbjct: 58   TAQVLAQAQYKAHAHAQAQAQAAHAQFQAQLQAQGLSLTQSQNVGGGNVGSPSPGFSTPG 117

Query: 1911 TASGGAKRVNQKXXXXXXXXXXXNSVSSFKTMELTPAARRKKRKLPEKQLPDRVAALLPE 1732
             A  G KR+ QK            + S  KTMELTPAAR+KK+KLPEKQL D+VAA+LPE
Sbjct: 118  LA--GVKRIPQKPPVRPPILSPGTTFSPLKTMELTPAARKKKQKLPEKQLQDKVAAILPE 175

Query: 1731 SALYTQLLEFEARVDAGLARKKIDIQESLKNPPCIQKTLRLYVFNTYANQIRSIPERQNT 1552
            SALYTQLLEFE+RVDA LARKK+DI E+LKNPPCIQKTLR+YVFNT+ANQ+ +IP++ N 
Sbjct: 176  SALYTQLLEFESRVDAALARKKVDIHEALKNPPCIQKTLRIYVFNTFANQVNTIPKKPNA 235

Query: 1551 EPPSWSLKIIGRILEDGVDPDSGGMIQKPNALYPKFSSFFKKISIALDHSLYPENATITW 1372
            +PP+W+LKIIGRILEDG+DPD  G++Q+ N LYPKFSSFFK+++I+LD  LYP++  I W
Sbjct: 236  DPPTWTLKIIGRILEDGIDPDHPGVVQRSNPLYPKFSSFFKRVTISLDQRLYPDSHIIVW 295

Query: 1371 ESARSAAPHEGFEIKRKGDKEFTAGIRLEMNYIPEKFKLSPPLMDVLAIEVDTRARVIAA 1192
            E+ARS APHEGFE+KRKGDKEF+  IRLEMNYIPEKFKLSP LM+VL IEVDTR R+IAA
Sbjct: 296  ENARSPAPHEGFEVKRKGDKEFSVNIRLEMNYIPEKFKLSPALMEVLGIEVDTRPRIIAA 355

Query: 1191 IWHYVKARKLQDPSDPAFFKCDPPLRKVFGEERMKFAMVSQKISPHLAPPQPIHLEHKIR 1012
            IWHYVKARKLQ+P+DP+FF CDPPL+KVFGE+++KF MVSQ+IS HL PPQPIHLEHK++
Sbjct: 356  IWHYVKARKLQNPNDPSFFHCDPPLQKVFGEDKLKFTMVSQRISQHLFPPQPIHLEHKVK 415

Query: 1011 LSGNNPAGSACYDVLVDVPFPLQKEMSAFLANTEKHKXXXXXXXXXXXXXXXIHEHRRRR 832
            LSGN+PAG+ACYDVLVDVPFP+ +E+SA LAN EK+K               IHEHRRRR
Sbjct: 416  LSGNSPAGTACYDVLVDVPFPIHRELSALLANAEKNKEIDACDEAICTAIRKIHEHRRRR 475

Query: 831  AFFLGFSQSPVEFINALIASQSRDLKLVAGEASRNAEKERRSDFYNQPWVEDAVIRYLNR 652
            AFFLGFSQSPVEFI+ALI SQS+DLKL+AGEASRNAEKERRSDF+NQPWVEDAVIRY+NR
Sbjct: 476  AFFLGFSQSPVEFIDALIESQSKDLKLLAGEASRNAEKERRSDFFNQPWVEDAVIRYINR 535

Query: 651  KPAAGSDAPGST 616
            KPA GSDAPGST
Sbjct: 536  KPATGSDAPGST 547


>ref|XP_002298619.1| chromatin remodeling complex subunit [Populus trichocarpa]
            gi|222845877|gb|EEE83424.1| chromatin remodeling complex
            subunit [Populus trichocarpa]
          Length = 555

 Score =  663 bits (1711), Expect = 0.0
 Identities = 350/557 (62%), Positives = 405/557 (72%), Gaps = 15/557 (2%)
 Frame = -3

Query: 2244 MSANNNNHTTN----MGGPSPLGNNSGMMSSNIPMNHPMHPRGQD--GSHFQG-QFQSPL 2086
            MS NNNN+  N    +G  S    NSGM++ ++  N P  P+ Q   G+ FQG QFQ   
Sbjct: 1    MSMNNNNNNNNPPKSLGQSSSPFGNSGMVNPSMGAN-PTFPQAQAQMGAGFQGGQFQLSQ 59

Query: 2085 RTQTLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA--------SSP 1930
               TL                                           +        SSP
Sbjct: 60   AQATLQAHLKAQQAHAQAQAAHAAQVQAAHAQFQAQLQAQGVSLNQNQSAGIGNLGSSSP 119

Query: 1929 SLSTPGTASGGAKRVNQKXXXXXXXXXXXNSVSSFKTMELTPAARRKKRKLPEKQLPDRV 1750
            S STPG AS  AKR+ QK           + VS  K M+L+ AARRKK+KLPEKQL DRV
Sbjct: 120  SFSTPGNAS--AKRLPQKPLGRPPGVPMSSMVSPLKPMDLSSAARRKKQKLPEKQLQDRV 177

Query: 1749 AALLPESALYTQLLEFEARVDAGLARKKIDIQESLKNPPCIQKTLRLYVFNTYANQIRSI 1570
            AA+LPESALYTQLLEFE RVDA LARKK+DIQE+LK+PPC+QKTLR+YVFNT+ANQIR+I
Sbjct: 178  AAILPESALYTQLLEFETRVDAALARKKVDIQEALKSPPCVQKTLRIYVFNTFANQIRTI 237

Query: 1569 PERQNTEPPSWSLKIIGRILEDGVDPDSGGMIQKPNALYPKFSSFFKKISIALDHSLYPE 1390
            P++ N +PP+W+LK+IGRILEDGVDPD  G +QK N LYPKFSSFFK++SI LD  LYP+
Sbjct: 238  PKKPNADPPTWTLKVIGRILEDGVDPDQPGAVQKSNPLYPKFSSFFKRVSIQLDQRLYPD 297

Query: 1389 NATITWESARSAAPHEGFEIKRKGDKEFTAGIRLEMNYIPEKFKLSPPLMDVLAIEVDTR 1210
            N  I WE ARS APHEGFE+KRKGDKEF+  IRLEMNY+PEKFKLSP LM+VL IEV+TR
Sbjct: 298  NHIIIWEHARSPAPHEGFEVKRKGDKEFSVNIRLEMNYVPEKFKLSPALMEVLGIEVETR 357

Query: 1209 ARVIAAIWHYVKARKLQDPSDPAFFKCDPPLRKVFGEERMKFAMVSQKISPHLAPPQPIH 1030
             R+IAAIWHYVKARKLQ+P DP+FF CD PL+KVFGE +MKF MVSQ+IS HL+PPQPIH
Sbjct: 358  PRIIAAIWHYVKARKLQNPEDPSFFNCDAPLQKVFGESKMKFTMVSQRISQHLSPPQPIH 417

Query: 1029 LEHKIRLSGNNPAGSACYDVLVDVPFPLQKEMSAFLANTEKHKXXXXXXXXXXXXXXXIH 850
            LEHKI+LSGN+PAG+ CYDV+VDVPFP+Q+E+SA LAN EK+K               IH
Sbjct: 418  LEHKIKLSGNSPAGTVCYDVVVDVPFPIQRELSALLANAEKNKEIDTCDEAICTAIRKIH 477

Query: 849  EHRRRRAFFLGFSQSPVEFINALIASQSRDLKLVAGEASRNAEKERRSDFYNQPWVEDAV 670
            EHRRRRAFFLGFSQSPVEF+NALI SQS+DLKLVAGEASRNAEKERRSDF+NQPWVEDAV
Sbjct: 478  EHRRRRAFFLGFSQSPVEFVNALIESQSKDLKLVAGEASRNAEKERRSDFFNQPWVEDAV 537

Query: 669  IRYLNRKPAAGSDAPGS 619
            IRYLNRKPAAGSDAP S
Sbjct: 538  IRYLNRKPAAGSDAPRS 554