BLASTX nr result

ID: Coptis24_contig00007919 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00007919
         (871 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001234138.1| profilin [Solanum lycopersicum] gi|17224229|...   256   5e-66
ref|XP_002514199.1| profilin, putative [Ricinus communis] gi|122...   254   2e-65
gb|AFK38257.1| unknown [Lotus japonicus] gi|388513519|gb|AFK4482...   254   2e-65
gb|AFK47285.1| unknown [Lotus japonicus]                              253   3e-65
gb|ABA81885.1| profilin-like [Solanum tuberosum]                      253   5e-65

>ref|NP_001234138.1| profilin [Solanum lycopersicum] gi|17224229|gb|AAL29690.1| profilin
           [Solanum lycopersicum]
          Length = 131

 Score =  256 bits (654), Expect = 5e-66
 Identities = 119/131 (90%), Positives = 128/131 (97%)
 Frame = +1

Query: 94  MSWQTYVDDHLMCDIEGNHLTSAAIIGQDGSVWAQSDNFPQFKPEEITGIMNDFNEPGSL 273
           MSWQTYVDDHLMCDIEGNHLTSAAIIGQDGSVWAQS NFPQFKPEEIT IMNDF EPG+L
Sbjct: 1   MSWQTYVDDHLMCDIEGNHLTSAAIIGQDGSVWAQSANFPQFKPEEITAIMNDFAEPGTL 60

Query: 274 APTGLYLGGTKYMVIQGEAGAVIRGKKGSGGVTIKKTNQAMIIGVYDEPLTPGQCNMIVE 453
           APTGL+LGGTKYMVIQGEAGAVIRGKKG+GG+T+KKTNQA+IIG+YDEP+TPGQCNMIVE
Sbjct: 61  APTGLHLGGTKYMVIQGEAGAVIRGKKGAGGITVKKTNQALIIGIYDEPMTPGQCNMIVE 120

Query: 454 RLGDYLIEQGL 486
           RLGDY+IEQGL
Sbjct: 121 RLGDYIIEQGL 131


>ref|XP_002514199.1| profilin, putative [Ricinus communis]
           gi|12230421|sp|O82572.1|PROF1_RICCO RecName:
           Full=Profilin-1 gi|3694872|gb|AAC62482.1| profilin
           [Ricinus communis] gi|223546655|gb|EEF48153.1| profilin,
           putative [Ricinus communis]
          Length = 131

 Score =  254 bits (649), Expect = 2e-65
 Identities = 119/131 (90%), Positives = 125/131 (95%)
 Frame = +1

Query: 94  MSWQTYVDDHLMCDIEGNHLTSAAIIGQDGSVWAQSDNFPQFKPEEITGIMNDFNEPGSL 273
           MSWQTYVDDHLMC+IEGNHLTSAAIIGQDGSVWAQS  FPQFKPEEIT IMNDFNEPGSL
Sbjct: 1   MSWQTYVDDHLMCEIEGNHLTSAAIIGQDGSVWAQSSTFPQFKPEEITAIMNDFNEPGSL 60

Query: 274 APTGLYLGGTKYMVIQGEAGAVIRGKKGSGGVTIKKTNQAMIIGVYDEPLTPGQCNMIVE 453
           APTGLYL GTKYMVIQGE GAVIRGKKG GGVT+KKTNQA+IIG+YDEP+TPGQCNMIVE
Sbjct: 61  APTGLYLSGTKYMVIQGEPGAVIRGKKGPGGVTVKKTNQALIIGIYDEPMTPGQCNMIVE 120

Query: 454 RLGDYLIEQGL 486
           RLGDYLI+QGL
Sbjct: 121 RLGDYLIDQGL 131


>gb|AFK38257.1| unknown [Lotus japonicus] gi|388513519|gb|AFK44821.1| unknown
           [Lotus japonicus]
          Length = 131

 Score =  254 bits (648), Expect = 2e-65
 Identities = 118/131 (90%), Positives = 127/131 (96%)
 Frame = +1

Query: 94  MSWQTYVDDHLMCDIEGNHLTSAAIIGQDGSVWAQSDNFPQFKPEEITGIMNDFNEPGSL 273
           MSWQTYVDDHL+C+IEGNHL+SAAI+GQDGSVWAQS NFPQFKPEEITGIMNDF EPGSL
Sbjct: 1   MSWQTYVDDHLLCEIEGNHLSSAAILGQDGSVWAQSANFPQFKPEEITGIMNDFAEPGSL 60

Query: 274 APTGLYLGGTKYMVIQGEAGAVIRGKKGSGGVTIKKTNQAMIIGVYDEPLTPGQCNMIVE 453
           APTGLYLGGTKYMVIQGE GAVIRGKKG GGVT+KKTNQA+IIG+YDEP+TPGQCNMIVE
Sbjct: 61  APTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTVKKTNQALIIGIYDEPMTPGQCNMIVE 120

Query: 454 RLGDYLIEQGL 486
           RLGDYLI+QGL
Sbjct: 121 RLGDYLIDQGL 131


>gb|AFK47285.1| unknown [Lotus japonicus]
          Length = 131

 Score =  253 bits (647), Expect = 3e-65
 Identities = 115/131 (87%), Positives = 126/131 (96%)
 Frame = +1

Query: 94  MSWQTYVDDHLMCDIEGNHLTSAAIIGQDGSVWAQSDNFPQFKPEEITGIMNDFNEPGSL 273
           MSWQ YVDDHL+CDIEGNHLTSAAI+GQDGSVWAQS NFPQFKPEEITGIMNDF EPG+L
Sbjct: 1   MSWQAYVDDHLLCDIEGNHLTSAAILGQDGSVWAQSTNFPQFKPEEITGIMNDFAEPGTL 60

Query: 274 APTGLYLGGTKYMVIQGEAGAVIRGKKGSGGVTIKKTNQAMIIGVYDEPLTPGQCNMIVE 453
           APTGLY+GGTKYMVIQGE GAVIRGKKG GGVT+KKTNQA++IG+YDEP+TPGQCNM+VE
Sbjct: 61  APTGLYIGGTKYMVIQGEPGAVIRGKKGPGGVTVKKTNQALVIGIYDEPMTPGQCNMVVE 120

Query: 454 RLGDYLIEQGL 486
           RLGDYL+EQGL
Sbjct: 121 RLGDYLVEQGL 131


>gb|ABA81885.1| profilin-like [Solanum tuberosum]
          Length = 131

 Score =  253 bits (645), Expect = 5e-65
 Identities = 116/131 (88%), Positives = 127/131 (96%)
 Frame = +1

Query: 94  MSWQTYVDDHLMCDIEGNHLTSAAIIGQDGSVWAQSDNFPQFKPEEITGIMNDFNEPGSL 273
           MSWQTYVD+HL+C+IEGNHLTSAAIIGQDG+VWAQS NFPQFKPEEITG+MNDF EPG+L
Sbjct: 1   MSWQTYVDEHLLCEIEGNHLTSAAIIGQDGTVWAQSANFPQFKPEEITGVMNDFAEPGTL 60

Query: 274 APTGLYLGGTKYMVIQGEAGAVIRGKKGSGGVTIKKTNQAMIIGVYDEPLTPGQCNMIVE 453
           APTGLYLGGTKYMVIQGE GAVIRGKKG GG+TIKKTNQA+IIG+YDEP+TPGQCNMIVE
Sbjct: 61  APTGLYLGGTKYMVIQGEPGAVIRGKKGPGGITIKKTNQALIIGIYDEPMTPGQCNMIVE 120

Query: 454 RLGDYLIEQGL 486
           RLGDYL+EQGL
Sbjct: 121 RLGDYLVEQGL 131


Top