BLASTX nr result

ID: Coptis24_contig00007889 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00007889
         (976 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520799.1| Prenylated Rab acceptor protein, putative [R...   169   1e-39
ref|XP_002311249.1| predicted protein [Populus trichocarpa] gi|2...   162   9e-38
ref|XP_004166118.1| PREDICTED: PRA1 family protein B1-like [Cucu...   161   2e-37
ref|XP_004146458.1| PREDICTED: PRA1 family protein B4-like [Cucu...   161   2e-37
ref|XP_002316187.1| predicted protein [Populus trichocarpa] gi|2...   161   2e-37

>ref|XP_002520799.1| Prenylated Rab acceptor protein, putative [Ricinus communis]
           gi|223539930|gb|EEF41508.1| Prenylated Rab acceptor
           protein, putative [Ricinus communis]
          Length = 213

 Score =  169 bits (427), Expect = 1e-39
 Identities = 84/160 (52%), Positives = 101/160 (63%)
 Frame = +1

Query: 151 AFKAFLTRLTDSTRLAFSHRRPWYELIDRSAFTRPESISESINRIRKNYSYFKINYITXX 330
           AF+AF++RL+ S R  FS RRPWYELIDR+A TRP+S+SE+++RIRKN +YFK+NYIT  
Sbjct: 25  AFRAFISRLSSSIRQGFSQRRPWYELIDRTAMTRPDSLSEAVSRIRKNATYFKVNYITLL 84

Query: 331 XXXXXXXXXXHPFSLITLVLLLSAWLFLYFFRPSDSPLVVFNRQFSDREILGIXXXXXXX 510
                     HPFSL+ L+ LL  W FLY FRPSD PLV+  R FSDRE LG        
Sbjct: 85  AIVLAFSLLSHPFSLLLLIFLLGGWFFLYLFRPSDQPLVILGRTFSDRETLGALVVLTIV 144

Query: 511 XMFLTSXXXXXXXXXXXXXXXXXXXXAFRVPEDLFLDEQE 630
            +FLTS                    AFRVPEDLFLD+QE
Sbjct: 145 VVFLTSVGSLLISALMIGIAIVCAHGAFRVPEDLFLDDQE 184


>ref|XP_002311249.1| predicted protein [Populus trichocarpa] gi|222851069|gb|EEE88616.1|
           predicted protein [Populus trichocarpa]
          Length = 211

 Score =  162 bits (411), Expect = 9e-38
 Identities = 83/160 (51%), Positives = 100/160 (62%)
 Frame = +1

Query: 151 AFKAFLTRLTDSTRLAFSHRRPWYELIDRSAFTRPESISESINRIRKNYSYFKINYITXX 330
           AF+ FL+RL+ S R  FS RRPWYELIDRS+  RP+SISE+  RIRKN SYFK+NYIT  
Sbjct: 23  AFRTFLSRLSISIRQGFSQRRPWYELIDRSSMARPDSISEAATRIRKNLSYFKVNYITLL 82

Query: 331 XXXXXXXXXXHPFSLITLVLLLSAWLFLYFFRPSDSPLVVFNRQFSDREILGIXXXXXXX 510
                     HP SL+ L+ LL++W+FLY FRPSD PLV+  R FS+RE LGI       
Sbjct: 83  ALILGFSLLSHPLSLLALLSLLASWIFLYLFRPSDQPLVILGRTFSERETLGILVVLTIV 142

Query: 511 XMFLTSXXXXXXXXXXXXXXXXXXXXAFRVPEDLFLDEQE 630
            +FLTS                    AFRVP+DLFLD+QE
Sbjct: 143 VIFLTSVGSLLISALMVGFALVCAHGAFRVPDDLFLDDQE 182


>ref|XP_004166118.1| PREDICTED: PRA1 family protein B1-like [Cucumis sativus]
          Length = 215

 Score =  161 bits (408), Expect = 2e-37
 Identities = 83/160 (51%), Positives = 101/160 (63%)
 Frame = +1

Query: 151 AFKAFLTRLTDSTRLAFSHRRPWYELIDRSAFTRPESISESINRIRKNYSYFKINYITXX 330
           AF+AFL+RLT S R  FSHRRPW EL+DRS+  RP+++SE+ +RIRKN+SYF++NYIT  
Sbjct: 28  AFRAFLSRLTSSVRQGFSHRRPWSELVDRSSMARPDNLSEAYSRIRKNFSYFRVNYITLF 87

Query: 331 XXXXXXXXXXHPFSLITLVLLLSAWLFLYFFRPSDSPLVVFNRQFSDREILGIXXXXXXX 510
                     HPFSL+TL+ LL+AW FLY FRPSD PLV+  R FSD E L         
Sbjct: 88  ALVLGFSLLSHPFSLLTLLSLLAAWCFLYIFRPSDQPLVIRGRTFSDFETLVGLGVLTVI 147

Query: 511 XMFLTSXXXXXXXXXXXXXXXXXXXXAFRVPEDLFLDEQE 630
            +FLTS                    AFRVPEDLFLD+QE
Sbjct: 148 VVFLTSVGSLLISASMIGFAIVCIHGAFRVPEDLFLDDQE 187


>ref|XP_004146458.1| PREDICTED: PRA1 family protein B4-like [Cucumis sativus]
          Length = 215

 Score =  161 bits (408), Expect = 2e-37
 Identities = 83/160 (51%), Positives = 101/160 (63%)
 Frame = +1

Query: 151 AFKAFLTRLTDSTRLAFSHRRPWYELIDRSAFTRPESISESINRIRKNYSYFKINYITXX 330
           AF+AFL+RLT S R  FSHRRPW EL+DRS+  RP+++SE+ +RIRKN+SYF++NYIT  
Sbjct: 28  AFRAFLSRLTSSVRQGFSHRRPWSELVDRSSMARPDNLSEAYSRIRKNFSYFRVNYITLF 87

Query: 331 XXXXXXXXXXHPFSLITLVLLLSAWLFLYFFRPSDSPLVVFNRQFSDREILGIXXXXXXX 510
                     HPFSL+TL+ LL+AW FLY FRPSD PLV+  R FSD E L         
Sbjct: 88  TLVLGFSLLSHPFSLLTLLSLLAAWCFLYIFRPSDQPLVIRGRTFSDFETLVGLGVLTVI 147

Query: 511 XMFLTSXXXXXXXXXXXXXXXXXXXXAFRVPEDLFLDEQE 630
            +FLTS                    AFRVPEDLFLD+QE
Sbjct: 148 VVFLTSVGSLLISASMIGFAIVCIHGAFRVPEDLFLDDQE 187


>ref|XP_002316187.1| predicted protein [Populus trichocarpa] gi|222865227|gb|EEF02358.1|
           predicted protein [Populus trichocarpa]
          Length = 219

 Score =  161 bits (408), Expect = 2e-37
 Identities = 83/160 (51%), Positives = 99/160 (61%)
 Frame = +1

Query: 151 AFKAFLTRLTDSTRLAFSHRRPWYELIDRSAFTRPESISESINRIRKNYSYFKINYITXX 330
           AF+AFL+R++ S R  FS RRPW ELIDR+   RP+S+SE+  RIRKN SYFK+NYIT  
Sbjct: 21  AFRAFLSRISTSIRQGFSQRRPWSELIDRNYIARPDSLSEAATRIRKNLSYFKVNYITLL 80

Query: 331 XXXXXXXXXXHPFSLITLVLLLSAWLFLYFFRPSDSPLVVFNRQFSDREILGIXXXXXXX 510
                     HP SLI L+ LL++W+FLY FRPSD PLV+  R FSDRE LGI       
Sbjct: 81  ALILAFSLLSHPLSLIVLLSLLASWIFLYLFRPSDQPLVILGRSFSDRETLGILVVSTIV 140

Query: 511 XMFLTSXXXXXXXXXXXXXXXXXXXXAFRVPEDLFLDEQE 630
            +FLTS                    AFRVPEDLFLD+QE
Sbjct: 141 VIFLTSVGSLLISASMVGFALVCAHGAFRVPEDLFLDDQE 180


Top