BLASTX nr result
ID: Coptis24_contig00007883
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00007883
(2334 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003518717.1| PREDICTED: probable pre-mRNA-splicing factor... 912 0.0
ref|XP_003521600.1| PREDICTED: probable pre-mRNA-splicing factor... 909 0.0
ref|XP_004135980.1| PREDICTED: probable pre-mRNA-splicing factor... 908 0.0
ref|XP_003554559.1| PREDICTED: probable pre-mRNA-splicing factor... 908 0.0
ref|XP_002278247.1| PREDICTED: probable pre-mRNA-splicing factor... 907 0.0
>ref|XP_003518717.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
helicase-like [Glycine max]
Length = 722
Score = 912 bits (2356), Expect(2) = 0.0
Identities = 456/528 (86%), Positives = 488/528 (92%)
Frame = +3
Query: 72 MGTERKRKVSLFDVVDETTVSSAAKLAKLNGGLVFNNSLINKWTGRAYSPNYYGILEKRK 251
MGTERKRKVSLFDVVD+ +AAK++K NGG V N+LIN+W G+ YS Y+ ILEKRK
Sbjct: 1 MGTERKRKVSLFDVVDD----AAAKMSKSNGGAVAANNLINRWNGKPYSQRYHDILEKRK 56
Query: 252 SLPVWQQKQEFFQVLNANQTLILVGETGSGKTTQIPQFVLDAVNLESQDKRKKMMVACTQ 431
+LPVW QK+EF Q L NQTLILVGETGSGKTTQIPQFVL+AV++E+ DKR+KMM+ACTQ
Sbjct: 57 TLPVWHQKEEFLQALKDNQTLILVGETGSGKTTQIPQFVLEAVDIETTDKRRKMMIACTQ 116
Query: 432 PXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSAKTVLKYLTDGMLLREAMTDPLLE 611
P EEMDV+IGEEVGYSIRFEDCSSA+TVLKYLTDGMLLREAMTDPLLE
Sbjct: 117 PRRVAAMSVSRRVAEEMDVSIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAMTDPLLE 176
Query: 612 RYKVIVLDEAHERTLATDVLFGLLKEVLRNRPDLKLVVMSATLEAEKFQAYFSGAPLMKV 791
RYKVI+LDEAHERTLATDVLFGLLKEVLRNRPDLKLVVMSATLEAEKFQ YFSGAPLMKV
Sbjct: 177 RYKVIILDEAHERTLATDVLFGLLKEVLRNRPDLKLVVMSATLEAEKFQGYFSGAPLMKV 236
Query: 792 PGRLHPVEIFYTQDPERDYLEAAIRTVVQIHMCEPAGDILVFLTGEEEIEDACRKINKEV 971
PGRLHPVEIFYTQDPERDYLEAAIRTVVQIHMCEP+GDILVFLTGEEEIEDACRKINKE+
Sbjct: 237 PGRLHPVEIFYTQDPERDYLEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDACRKINKEI 296
Query: 972 ANLGEQVGPVKVVPLYSTLPPAMQQKIFDPAPPALNDSGPPGRKIVVSTNIAETSLTIDG 1151
+N+G+QVGPVKVVPLYSTLPPAMQQKIF+PAPP + + GPPGRKIVVSTNIAETSLTIDG
Sbjct: 297 SNMGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPVKEGGPPGRKIVVSTNIAETSLTIDG 356
Query: 1152 IVYVIDPGFAKQKVYNPRIRVESLLVSPISRASAHQRSGRAGRTQPGKCFRLYTEKSFKD 1331
IVYVIDPGFAKQKVYNPR+RVESLLVSPIS+ASAHQRSGRAGRTQPGKCFRLYTEKSF +
Sbjct: 357 IVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNN 416
Query: 1332 DLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDD 1511
DLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDD
Sbjct: 417 DLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDD 476
Query: 1512 GNLTKLGEIMSEFPLDPQMSKMLVVSPEFNCSNEILSISAMLSVSQLF 1655
GNLTKLG+IMSEFPLDPQMSKMLVVSPEFNCSNEILS+SAMLSV F
Sbjct: 477 GNLTKLGQIMSEFPLDPQMSKMLVVSPEFNCSNEILSVSAMLSVPNCF 524
Score = 348 bits (893), Expect(2) = 0.0
Identities = 162/185 (87%), Positives = 167/185 (90%)
Frame = +1
Query: 1744 VPNCFVRPXXXXXXXXXXXXRFGHIDGDHLTLLNVYHAYKQNNEDAQWCYDNFVNNRALK 1923
VPNCFVRP RFGHIDGDHLTLLNVYHAYKQNNED WCYDNFVN+RALK
Sbjct: 520 VPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRALK 579
Query: 1924 SADNVRQQLVRIMARFNLKLCSTDFSSRDYYVNIKKTMLAGYFMQVAHLERAGHYLTVKD 2103
SADNVRQQLVRIMARFNLKLCSTDF+SRDYYVNI+K MLAGYFMQVAHLER GHYLTVKD
Sbjct: 580 SADNVRQQLVRIMARFNLKLCSTDFNSRDYYVNIRKAMLAGYFMQVAHLERTGHYLTVKD 639
Query: 2104 NQVVHLHPSNCLDHKPEWAIYNEYVLTSRNFIRTVTDIRGEWLVDIAPHYYDLANFPSCE 2283
NQVVHLHPSNCLDHKPEW IYNEYVLTSRNFIRTVTDIRGEWLVD+APHYYDL+NFP CE
Sbjct: 640 NQVVHLHPSNCLDHKPEWVIYNEYVLTSRNFIRTVTDIRGEWLVDVAPHYYDLSNFPQCE 699
Query: 2284 AKRVL 2298
AKRVL
Sbjct: 700 AKRVL 704
>ref|XP_003521600.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
helicase-like [Glycine max]
Length = 720
Score = 909 bits (2349), Expect(2) = 0.0
Identities = 461/528 (87%), Positives = 482/528 (91%)
Frame = +3
Query: 72 MGTERKRKVSLFDVVDETTVSSAAKLAKLNGGLVFNNSLINKWTGRAYSPNYYGILEKRK 251
MGTERKRKVSLFDVVD+ SAAK+AK NGG N+LIN WT R YS Y+ ILEKRK
Sbjct: 1 MGTERKRKVSLFDVVDD----SAAKMAKTNGGAA--NNLINHWTSRPYSQRYFEILEKRK 54
Query: 252 SLPVWQQKQEFFQVLNANQTLILVGETGSGKTTQIPQFVLDAVNLESQDKRKKMMVACTQ 431
+LPVW QK+EF QVL NQTLILVGETGSGKTTQIPQFVLDAV LE+ DKRKKMM+ACTQ
Sbjct: 55 TLPVWHQKEEFLQVLKDNQTLILVGETGSGKTTQIPQFVLDAVELETPDKRKKMMIACTQ 114
Query: 432 PXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSAKTVLKYLTDGMLLREAMTDPLLE 611
P EEMDVTIGEEVGYSIRFEDCSSAKTVLKYLTDGMLLREAMTDPLLE
Sbjct: 115 PRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSAKTVLKYLTDGMLLREAMTDPLLE 174
Query: 612 RYKVIVLDEAHERTLATDVLFGLLKEVLRNRPDLKLVVMSATLEAEKFQAYFSGAPLMKV 791
RYKVI+LDEAHERTLATDVLFGLLKEVL+NRPD+KLVVMSATLEAEKFQ YF GAPLMKV
Sbjct: 175 RYKVIILDEAHERTLATDVLFGLLKEVLKNRPDMKLVVMSATLEAEKFQGYFFGAPLMKV 234
Query: 792 PGRLHPVEIFYTQDPERDYLEAAIRTVVQIHMCEPAGDILVFLTGEEEIEDACRKINKEV 971
PGRLHPVEIFYTQ+PERDYLEA IRTVVQIHMCEP GDILVFLTGEEEIEDACRKI KE+
Sbjct: 235 PGRLHPVEIFYTQEPERDYLEAGIRTVVQIHMCEPPGDILVFLTGEEEIEDACRKITKEI 294
Query: 972 ANLGEQVGPVKVVPLYSTLPPAMQQKIFDPAPPALNDSGPPGRKIVVSTNIAETSLTIDG 1151
+NLG+QVGPVKVVPLYSTLPPAMQQKIF+PAPP L + GPPGRKIVVSTNIAETSLTIDG
Sbjct: 295 SNLGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPLKEGGPPGRKIVVSTNIAETSLTIDG 354
Query: 1152 IVYVIDPGFAKQKVYNPRIRVESLLVSPISRASAHQRSGRAGRTQPGKCFRLYTEKSFKD 1331
IVYVIDPGFAKQKVYNPR+RVESLLVSPIS+ASAHQRSGRAGRTQPGKCFRLYTEKSF +
Sbjct: 355 IVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNN 414
Query: 1332 DLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDD 1511
DLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDD
Sbjct: 415 DLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDD 474
Query: 1512 GNLTKLGEIMSEFPLDPQMSKMLVVSPEFNCSNEILSISAMLSVSQLF 1655
GNLTKLGEIMSEFPLDPQMSKMLVVSPEFNCSNEILS+SAMLSV F
Sbjct: 475 GNLTKLGEIMSEFPLDPQMSKMLVVSPEFNCSNEILSVSAMLSVPNCF 522
Score = 347 bits (890), Expect(2) = 0.0
Identities = 161/185 (87%), Positives = 167/185 (90%)
Frame = +1
Query: 1744 VPNCFVRPXXXXXXXXXXXXRFGHIDGDHLTLLNVYHAYKQNNEDAQWCYDNFVNNRALK 1923
VPNCFVRP RFGHIDGDHLTLLNVYHAYKQNNED WCYDNFVN+RALK
Sbjct: 518 VPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRALK 577
Query: 1924 SADNVRQQLVRIMARFNLKLCSTDFSSRDYYVNIKKTMLAGYFMQVAHLERAGHYLTVKD 2103
SADNVRQQLVRIM+RFNLKLCSTDF+SRDYYVNI+K MLAGYFMQVAHLER GHYLTVKD
Sbjct: 578 SADNVRQQLVRIMSRFNLKLCSTDFNSRDYYVNIRKAMLAGYFMQVAHLERTGHYLTVKD 637
Query: 2104 NQVVHLHPSNCLDHKPEWAIYNEYVLTSRNFIRTVTDIRGEWLVDIAPHYYDLANFPSCE 2283
NQVVHLHPSNCLDHKPEW IYNEYVLTSRNFIRTVTDIRGEWLVD+APHYYDL+NFP CE
Sbjct: 638 NQVVHLHPSNCLDHKPEWVIYNEYVLTSRNFIRTVTDIRGEWLVDVAPHYYDLSNFPQCE 697
Query: 2284 AKRVL 2298
AKRVL
Sbjct: 698 AKRVL 702
>ref|XP_004135980.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
helicase-like [Cucumis sativus]
gi|449515243|ref|XP_004164659.1| PREDICTED: probable
pre-mRNA-splicing factor ATP-dependent RNA helicase-like
[Cucumis sativus]
Length = 732
Score = 908 bits (2347), Expect(2) = 0.0
Identities = 461/536 (86%), Positives = 489/536 (91%), Gaps = 8/536 (1%)
Frame = +3
Query: 72 MGTERKRKVSLFDVVDETTVSSAAKLAKLNGGLV--------FNNSLINKWTGRAYSPNY 227
MG ERKRKVSLFDVVDET+VS AKL K+NGG+ NSLIN+WTGR +S Y
Sbjct: 1 MGAERKRKVSLFDVVDETSVS--AKLNKVNGGVAPLNNGGGNAGNSLINRWTGRQFSQRY 58
Query: 228 YGILEKRKSLPVWQQKQEFFQVLNANQTLILVGETGSGKTTQIPQFVLDAVNLESQDKRK 407
Y ILEKRK+LPVW QK+EFFQVL ++QTLILVGETGSGKTTQIPQFVL+AV+L+S DKRK
Sbjct: 59 YEILEKRKTLPVWHQKEEFFQVLKSSQTLILVGETGSGKTTQIPQFVLEAVDLDSPDKRK 118
Query: 408 KMMVACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSAKTVLKYLTDGMLLRE 587
KMMVACTQP EEMDVTIGEEVGYSIRFEDCSSA+TVLKYLTDGMLLRE
Sbjct: 119 KMMVACTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLRE 178
Query: 588 AMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLRNRPDLKLVVMSATLEAEKFQAYF 767
AMTDPLLERYKVI+LDEAHERTLATDVLFGLLKEVL+NRPDLKLVVMSATLEAEKFQ YF
Sbjct: 179 AMTDPLLERYKVIILDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYF 238
Query: 768 SGAPLMKVPGRLHPVEIFYTQDPERDYLEAAIRTVVQIHMCEPAGDILVFLTGEEEIEDA 947
GAPLMKVPGRLHPVEIFYTQ+PERDYLEAAIRTVVQIH+CEP GDILVFLTGEEEIEDA
Sbjct: 239 YGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHLCEPPGDILVFLTGEEEIEDA 298
Query: 948 CRKINKEVANLGEQVGPVKVVPLYSTLPPAMQQKIFDPAPPALNDSGPPGRKIVVSTNIA 1127
CRKINKE+ NLG+QVGPVKVVPLYSTLPPAMQQKIF+PAPP + + GP GRKIVVSTNIA
Sbjct: 299 CRKINKEIGNLGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPVKEDGPAGRKIVVSTNIA 358
Query: 1128 ETSLTIDGIVYVIDPGFAKQKVYNPRIRVESLLVSPISRASAHQRSGRAGRTQPGKCFRL 1307
ETSLTIDGIVYVIDPGF+KQKVYNPR+RVESLLVSPIS+ASAHQRSGRAGRTQPGKCFRL
Sbjct: 359 ETSLTIDGIVYVIDPGFSKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRL 418
Query: 1308 YTEKSFKDDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLN 1487
YTEKSF++DLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLN
Sbjct: 419 YTEKSFQNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLN 478
Query: 1488 YLGALDDDGNLTKLGEIMSEFPLDPQMSKMLVVSPEFNCSNEILSISAMLSVSQLF 1655
YLGALDDDGNLTKLGEIMSEFPLDPQMSKMLVVSPEF CSNEILS+SAMLSV F
Sbjct: 479 YLGALDDDGNLTKLGEIMSEFPLDPQMSKMLVVSPEFKCSNEILSVSAMLSVPNCF 534
Score = 335 bits (858), Expect(2) = 0.0
Identities = 153/185 (82%), Positives = 165/185 (89%)
Frame = +1
Query: 1744 VPNCFVRPXXXXXXXXXXXXRFGHIDGDHLTLLNVYHAYKQNNEDAQWCYDNFVNNRALK 1923
VPNCFVRP RFGHIDGDHLTLLNVYHAYKQNNED WCY+NF+N+RA+K
Sbjct: 530 VPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDQSWCYENFINHRAMK 589
Query: 1924 SADNVRQQLVRIMARFNLKLCSTDFSSRDYYVNIKKTMLAGYFMQVAHLERAGHYLTVKD 2103
+ADNVR+QLVRIM+RFNLKLCSTDF++R+YYVNI+K ML+GYFMQVAHLER GHYLTVKD
Sbjct: 590 AADNVREQLVRIMSRFNLKLCSTDFNNREYYVNIRKAMLSGYFMQVAHLERTGHYLTVKD 649
Query: 2104 NQVVHLHPSNCLDHKPEWAIYNEYVLTSRNFIRTVTDIRGEWLVDIAPHYYDLANFPSCE 2283
NQVVHLHPSNCLDHKPEW IYNEYVLTSRNFIRTVTDIRGEWLVDIA HYYDL NFP CE
Sbjct: 650 NQVVHLHPSNCLDHKPEWVIYNEYVLTSRNFIRTVTDIRGEWLVDIASHYYDLENFPQCE 709
Query: 2284 AKRVL 2298
AKRVL
Sbjct: 710 AKRVL 714
>ref|XP_003554559.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
helicase-like isoform 1 [Glycine max]
Length = 721
Score = 908 bits (2346), Expect(2) = 0.0
Identities = 462/528 (87%), Positives = 481/528 (91%)
Frame = +3
Query: 72 MGTERKRKVSLFDVVDETTVSSAAKLAKLNGGLVFNNSLINKWTGRAYSPNYYGILEKRK 251
MGTERKRKVSLFDVVD+ SAAK+AK NGG NN L N WT R YS Y+ ILEKRK
Sbjct: 1 MGTERKRKVSLFDVVDD----SAAKMAKSNGGAAANN-LTNHWTARPYSQRYFEILEKRK 55
Query: 252 SLPVWQQKQEFFQVLNANQTLILVGETGSGKTTQIPQFVLDAVNLESQDKRKKMMVACTQ 431
+LPVW QK+EF QVL NQTLILVGETGSGKTTQIPQFVLDAV LE+ DKR+KMMVACTQ
Sbjct: 56 TLPVWHQKEEFLQVLKDNQTLILVGETGSGKTTQIPQFVLDAVELETPDKRRKMMVACTQ 115
Query: 432 PXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSAKTVLKYLTDGMLLREAMTDPLLE 611
P EEMDVTIGEEVGYSIRFEDCSSAKTVLKYLTDGMLLREAMTDPLLE
Sbjct: 116 PRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSAKTVLKYLTDGMLLREAMTDPLLE 175
Query: 612 RYKVIVLDEAHERTLATDVLFGLLKEVLRNRPDLKLVVMSATLEAEKFQAYFSGAPLMKV 791
RYKVI+LDEAHERTLATDVLFGLLKEVL+NRPD+KLVVMSATLEAEKFQ YF GAPLMKV
Sbjct: 176 RYKVIILDEAHERTLATDVLFGLLKEVLKNRPDMKLVVMSATLEAEKFQGYFFGAPLMKV 235
Query: 792 PGRLHPVEIFYTQDPERDYLEAAIRTVVQIHMCEPAGDILVFLTGEEEIEDACRKINKEV 971
PGRLHPVEIFYTQ+PERDYLEA IRTVVQIHMCEP GDILVFLTGEEEIEDACRKI KE+
Sbjct: 236 PGRLHPVEIFYTQEPERDYLEAGIRTVVQIHMCEPPGDILVFLTGEEEIEDACRKITKEI 295
Query: 972 ANLGEQVGPVKVVPLYSTLPPAMQQKIFDPAPPALNDSGPPGRKIVVSTNIAETSLTIDG 1151
+NLG+QVGPVKVVPLYSTLPPAMQQKIF+PAPP L + GPPGRKIVVSTNIAETSLTIDG
Sbjct: 296 SNLGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPLKEGGPPGRKIVVSTNIAETSLTIDG 355
Query: 1152 IVYVIDPGFAKQKVYNPRIRVESLLVSPISRASAHQRSGRAGRTQPGKCFRLYTEKSFKD 1331
IVYVIDPGFAKQKVYNPRIRVESLLVSPIS+ASAHQRSGRAGRTQPGKCFRLYTEKSF +
Sbjct: 356 IVYVIDPGFAKQKVYNPRIRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNN 415
Query: 1332 DLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDD 1511
DLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDD
Sbjct: 416 DLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDD 475
Query: 1512 GNLTKLGEIMSEFPLDPQMSKMLVVSPEFNCSNEILSISAMLSVSQLF 1655
GNLTKLGEIMSEFPLDPQMSKMLVVSPEFNCSNEILS+SAMLSV F
Sbjct: 476 GNLTKLGEIMSEFPLDPQMSKMLVVSPEFNCSNEILSVSAMLSVPNCF 523
Score = 347 bits (891), Expect(2) = 0.0
Identities = 162/185 (87%), Positives = 167/185 (90%)
Frame = +1
Query: 1744 VPNCFVRPXXXXXXXXXXXXRFGHIDGDHLTLLNVYHAYKQNNEDAQWCYDNFVNNRALK 1923
VPNCFVRP RFGHIDGDHLTLLNVYHAYKQNNED WCYDNFVN+RALK
Sbjct: 519 VPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRALK 578
Query: 1924 SADNVRQQLVRIMARFNLKLCSTDFSSRDYYVNIKKTMLAGYFMQVAHLERAGHYLTVKD 2103
SADNVRQQLVRIM+RFNLKLCSTDF+SRDYYVNI+K MLAGYFMQVAHLER GHYLTVKD
Sbjct: 579 SADNVRQQLVRIMSRFNLKLCSTDFNSRDYYVNIRKAMLAGYFMQVAHLERTGHYLTVKD 638
Query: 2104 NQVVHLHPSNCLDHKPEWAIYNEYVLTSRNFIRTVTDIRGEWLVDIAPHYYDLANFPSCE 2283
NQVVHLHPSNCLDHKPEW IYNEYVLTSRNFIRTVTDIRGEWLVDIAPHYYDL+NFP CE
Sbjct: 639 NQVVHLHPSNCLDHKPEWVIYNEYVLTSRNFIRTVTDIRGEWLVDIAPHYYDLSNFPQCE 698
Query: 2284 AKRVL 2298
AKRVL
Sbjct: 699 AKRVL 703
>ref|XP_002278247.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
helicase [Vitis vinifera] gi|147787427|emb|CAN64445.1|
hypothetical protein VITISV_036050 [Vitis vinifera]
Length = 728
Score = 907 bits (2345), Expect(2) = 0.0
Identities = 458/532 (86%), Positives = 489/532 (91%), Gaps = 4/532 (0%)
Frame = +3
Query: 72 MGTERKRKVSLFDVVDETTVSSAAKLAKLNGGLVFNNS----LINKWTGRAYSPNYYGIL 239
MGTERKRKVSLFDVVDET+VS AK++K NG NN+ L+N+W GR YS YY IL
Sbjct: 1 MGTERKRKVSLFDVVDETSVS--AKISKSNGSGAINNNNNNNLVNRWNGRPYSQRYYEIL 58
Query: 240 EKRKSLPVWQQKQEFFQVLNANQTLILVGETGSGKTTQIPQFVLDAVNLESQDKRKKMMV 419
EKR++LPVW QK+EF QVL ANQ+LILVGETGSGKTTQIPQFVL+AV++E+ DKRKKMM+
Sbjct: 59 EKRRTLPVWHQKEEFLQVLKANQSLILVGETGSGKTTQIPQFVLEAVDIETPDKRKKMMI 118
Query: 420 ACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSAKTVLKYLTDGMLLREAMTD 599
ACTQP EEMDVTIGEEVGYSIRFEDCSSA+TVLKYLTDGMLLREAMTD
Sbjct: 119 ACTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAMTD 178
Query: 600 PLLERYKVIVLDEAHERTLATDVLFGLLKEVLRNRPDLKLVVMSATLEAEKFQAYFSGAP 779
PLLERYKVI+LDEAHERTLATDVLFGLLKEVL+NRPDLK+VVMSATLEAEKFQ YF+GAP
Sbjct: 179 PLLERYKVIILDEAHERTLATDVLFGLLKEVLKNRPDLKVVVMSATLEAEKFQGYFNGAP 238
Query: 780 LMKVPGRLHPVEIFYTQDPERDYLEAAIRTVVQIHMCEPAGDILVFLTGEEEIEDACRKI 959
LMKVPGRLHPVEIFYTQ+PERDYLEAAIRTVVQIHMCE AGDILVFLTGEEEIEDAC+KI
Sbjct: 239 LMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEGAGDILVFLTGEEEIEDACKKI 298
Query: 960 NKEVANLGEQVGPVKVVPLYSTLPPAMQQKIFDPAPPALNDSGPPGRKIVVSTNIAETSL 1139
+KE+ANLG+QVGPVK VPLYSTLPPAMQQKIF+PAPP L + GPPGRKIVVSTNIAETSL
Sbjct: 299 SKEIANLGDQVGPVKAVPLYSTLPPAMQQKIFEPAPPPLTEGGPPGRKIVVSTNIAETSL 358
Query: 1140 TIDGIVYVIDPGFAKQKVYNPRIRVESLLVSPISRASAHQRSGRAGRTQPGKCFRLYTEK 1319
TIDGIV+VIDPGFAKQKVYNPR+RVESLLVSPIS+ASAHQRSGRAGRTQPGKCFRLYTEK
Sbjct: 359 TIDGIVFVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEK 418
Query: 1320 SFKDDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGA 1499
SF +DLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGA
Sbjct: 419 SFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGA 478
Query: 1500 LDDDGNLTKLGEIMSEFPLDPQMSKMLVVSPEFNCSNEILSISAMLSVSQLF 1655
LDDDGNLTKLGEIMSEFPLDPQMSKMLVVSPEFNCSNEILSISAMLSV F
Sbjct: 479 LDDDGNLTKLGEIMSEFPLDPQMSKMLVVSPEFNCSNEILSISAMLSVPNCF 530
Score = 346 bits (887), Expect(2) = 0.0
Identities = 159/185 (85%), Positives = 167/185 (90%)
Frame = +1
Query: 1744 VPNCFVRPXXXXXXXXXXXXRFGHIDGDHLTLLNVYHAYKQNNEDAQWCYDNFVNNRALK 1923
VPNCFVRP RFGHIDGDHLTLLNVYHAYKQNNED WCY+NFVN RALK
Sbjct: 526 VPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYENFVNQRALK 585
Query: 1924 SADNVRQQLVRIMARFNLKLCSTDFSSRDYYVNIKKTMLAGYFMQVAHLERAGHYLTVKD 2103
+ADNVRQQLVRIMARFNLKLCSTDF+SRDYY+NI+K MLAGYFMQVAHLER GHYLTVKD
Sbjct: 586 AADNVRQQLVRIMARFNLKLCSTDFNSRDYYINIRKAMLAGYFMQVAHLERTGHYLTVKD 645
Query: 2104 NQVVHLHPSNCLDHKPEWAIYNEYVLTSRNFIRTVTDIRGEWLVDIAPHYYDLANFPSCE 2283
NQVVHLHPSNCLDHKPEW IYNEYVLTSRNFIRTVTD+RGEWLVD+APHYYDLANFP+CE
Sbjct: 646 NQVVHLHPSNCLDHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLVDVAPHYYDLANFPNCE 705
Query: 2284 AKRVL 2298
AKRVL
Sbjct: 706 AKRVL 710