BLASTX nr result
ID: Coptis24_contig00007882
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00007882
(626 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AEO22189.1| ABCG subfamily transporter protein [Solanum tuber... 116 7e-34
gb|AFA43816.1| ABCG/PDR subfamily ABC protein [Petunia x hybrida] 116 9e-34
gb|AFA43815.1| ABCG/PDR subfamily ABC transporter [Petunia axill... 116 9e-34
emb|CBI20978.3| unnamed protein product [Vitis vinifera] 116 3e-32
ref|XP_002527332.1| ATP-binding cassette transporter, putative [... 113 4e-32
>gb|AEO22189.1| ABCG subfamily transporter protein [Solanum tuberosum]
Length = 1423
Score = 116 bits (290), Expect(3) = 7e-34
Identities = 59/74 (79%), Positives = 67/74 (90%)
Frame = -3
Query: 480 VWTAKALFMDEISTGLDRSTTFQIVNALRQTIHILQGTGVISLLQPALETCDLFNEIILI 301
V A+ALFMDEISTGLD STT+QIVN++RQ+IHILQGT VISLLQPA ET DLF++IIL+
Sbjct: 493 VGPARALFMDEISTGLDSSTTYQIVNSIRQSIHILQGTAVISLLQPAPETYDLFDDIILL 552
Query: 300 SDGQIVY*GPRENV 259
SDGQIVY GPRENV
Sbjct: 553 SDGQIVYQGPRENV 566
Score = 38.1 bits (87), Expect(3) = 7e-34
Identities = 22/65 (33%), Positives = 29/65 (44%), Gaps = 32/65 (49%)
Frame = -1
Query: 152 KKDQKQYWVRKD--------------------------------DKSKSHHATLTMKKFG 69
+KDQ+QYW R+D DKSKSH A LT K++G
Sbjct: 593 RKDQEQYWSRRDEPYRFITACEFSDVFQSFDVGRKLGDELAVPFDKSKSHPAALTTKRYG 652
Query: 68 VNKKE 54
++KKE
Sbjct: 653 ISKKE 657
Score = 35.8 bits (81), Expect(3) = 7e-34
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = -2
Query: 58 RKELLKACIAREYLRMKRN 2
+KELLKAC AREYL MKRN
Sbjct: 655 KKELLKACTAREYLLMKRN 673
Score = 72.0 bits (175), Expect = 8e-11
Identities = 37/59 (62%), Positives = 45/59 (76%), Gaps = 7/59 (11%)
Frame = -2
Query: 625 ILGLDVCADTLVENDMLRGISGGQMKRVTIG-------EMLAGAAKALFMSEISIGLDS 470
ILGL++CADTLV ++M+RGISGGQ KR+T G EM+ G A+ALFM EIS GLDS
Sbjct: 452 ILGLEICADTLVGDEMIRGISGGQRKRLTTGLDKQKPWEMMVGPARALFMDEISTGLDS 510
>gb|AFA43816.1| ABCG/PDR subfamily ABC protein [Petunia x hybrida]
Length = 1452
Score = 116 bits (290), Expect(3) = 9e-34
Identities = 59/74 (79%), Positives = 67/74 (90%)
Frame = -3
Query: 480 VWTAKALFMDEISTGLDRSTTFQIVNALRQTIHILQGTGVISLLQPALETCDLFNEIILI 301
V A+ALFMDEISTGLD STT+QIVN++RQ+IHILQGT VISLLQPA ET DLF++IIL+
Sbjct: 339 VGPARALFMDEISTGLDSSTTYQIVNSIRQSIHILQGTAVISLLQPAPETYDLFDDIILL 398
Query: 300 SDGQIVY*GPRENV 259
SDGQIVY GPRENV
Sbjct: 399 SDGQIVYQGPRENV 412
Score = 37.7 bits (86), Expect(3) = 9e-34
Identities = 22/65 (33%), Positives = 29/65 (44%), Gaps = 32/65 (49%)
Frame = -1
Query: 152 KKDQKQYWVRKD--------------------------------DKSKSHHATLTMKKFG 69
+KDQ+QYW R++ DKSKSH A LT K++G
Sbjct: 439 RKDQEQYWARREESYKFITVREFSEAFQAFHIGRKLGDELAVPFDKSKSHPAALTTKRYG 498
Query: 68 VNKKE 54
V+KKE
Sbjct: 499 VSKKE 503
Score = 35.8 bits (81), Expect(3) = 9e-34
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = -2
Query: 58 RKELLKACIAREYLRMKRN 2
+KELLKAC AREYL MKRN
Sbjct: 501 KKELLKACTAREYLLMKRN 519
Score = 77.8 bits (190), Expect = 1e-12
Identities = 36/52 (69%), Positives = 45/52 (86%)
Frame = -2
Query: 625 ILGLDVCADTLVENDMLRGISGGQMKRVTIGEMLAGAAKALFMSEISIGLDS 470
ILGL++CADT+V ++M+RGISGGQ KR+T GEM+ G A+ALFM EIS GLDS
Sbjct: 305 ILGLEICADTIVGDEMVRGISGGQRKRLTTGEMMVGPARALFMDEISTGLDS 356
>gb|AFA43815.1| ABCG/PDR subfamily ABC transporter [Petunia axillaris]
Length = 1452
Score = 116 bits (290), Expect(3) = 9e-34
Identities = 59/74 (79%), Positives = 67/74 (90%)
Frame = -3
Query: 480 VWTAKALFMDEISTGLDRSTTFQIVNALRQTIHILQGTGVISLLQPALETCDLFNEIILI 301
V A+ALFMDEISTGLD STT+QIVN++RQ+IHILQGT VISLLQPA ET DLF++IIL+
Sbjct: 339 VGPARALFMDEISTGLDSSTTYQIVNSIRQSIHILQGTAVISLLQPAPETYDLFDDIILL 398
Query: 300 SDGQIVY*GPRENV 259
SDGQIVY GPRENV
Sbjct: 399 SDGQIVYQGPRENV 412
Score = 37.7 bits (86), Expect(3) = 9e-34
Identities = 22/65 (33%), Positives = 29/65 (44%), Gaps = 32/65 (49%)
Frame = -1
Query: 152 KKDQKQYWVRKD--------------------------------DKSKSHHATLTMKKFG 69
+KDQ+QYW R++ DKSKSH A LT K++G
Sbjct: 439 RKDQEQYWARREESYKFITVREFSEAFQAFHIGRKLGDELAVPFDKSKSHPAALTTKRYG 498
Query: 68 VNKKE 54
V+KKE
Sbjct: 499 VSKKE 503
Score = 35.8 bits (81), Expect(3) = 9e-34
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = -2
Query: 58 RKELLKACIAREYLRMKRN 2
+KELLKAC AREYL MKRN
Sbjct: 501 KKELLKACTAREYLLMKRN 519
Score = 75.5 bits (184), Expect = 7e-12
Identities = 35/52 (67%), Positives = 44/52 (84%)
Frame = -2
Query: 625 ILGLDVCADTLVENDMLRGISGGQMKRVTIGEMLAGAAKALFMSEISIGLDS 470
ILGL++CADT+V ++M+ GISGGQ KR+T GEM+ G A+ALFM EIS GLDS
Sbjct: 305 ILGLEICADTIVGDEMIPGISGGQRKRLTTGEMMVGPARALFMDEISTGLDS 356
>emb|CBI20978.3| unnamed protein product [Vitis vinifera]
Length = 1436
Score = 116 bits (291), Expect(3) = 3e-32
Identities = 59/74 (79%), Positives = 67/74 (90%)
Frame = -3
Query: 480 VWTAKALFMDEISTGLDRSTTFQIVNALRQTIHILQGTGVISLLQPALETCDLFNEIILI 301
V AKALFMDEISTGLD STTFQIVN++RQ+IHIL+GT +ISLLQPA ET DLF++IIL+
Sbjct: 338 VGPAKALFMDEISTGLDSSTTFQIVNSIRQSIHILKGTAIISLLQPAPETYDLFDDIILL 397
Query: 300 SDGQIVY*GPRENV 259
SDGQIVY GPRENV
Sbjct: 398 SDGQIVYQGPRENV 411
Score = 34.7 bits (78), Expect(3) = 3e-32
Identities = 21/65 (32%), Positives = 27/65 (41%), Gaps = 32/65 (49%)
Frame = -1
Query: 152 KKDQKQYWVRKD--------------------------------DKSKSHHATLTMKKFG 69
KKDQ+QYW + DK+K+H A LT KK+G
Sbjct: 438 KKDQEQYWAHRGEPYSFVTVTEFSEAFQSFHVGRRLGDELAIPFDKAKAHTAALTTKKYG 497
Query: 68 VNKKE 54
V+KKE
Sbjct: 498 VSKKE 502
Score = 33.5 bits (75), Expect(3) = 3e-32
Identities = 15/19 (78%), Positives = 17/19 (89%)
Frame = -2
Query: 58 RKELLKACIAREYLRMKRN 2
+KELLKACI+RE L MKRN
Sbjct: 500 KKELLKACISRELLLMKRN 518
Score = 79.0 bits (193), Expect = 7e-13
Identities = 38/52 (73%), Positives = 45/52 (86%)
Frame = -2
Query: 625 ILGLDVCADTLVENDMLRGISGGQMKRVTIGEMLAGAAKALFMSEISIGLDS 470
ILGL+VCADT+V ++M+RGISGGQ +R+T GEML G AKALFM EIS GLDS
Sbjct: 304 ILGLEVCADTIVGDEMVRGISGGQKRRLTTGEMLVGPAKALFMDEISTGLDS 355
>ref|XP_002527332.1| ATP-binding cassette transporter, putative [Ricinus communis]
gi|223533332|gb|EEF35084.1| ATP-binding cassette
transporter, putative [Ricinus communis]
Length = 1443
Score = 113 bits (283), Expect(3) = 4e-32
Identities = 58/74 (78%), Positives = 66/74 (89%)
Frame = -3
Query: 480 VWTAKALFMDEISTGLDRSTTFQIVNALRQTIHILQGTGVISLLQPALETCDLFNEIILI 301
V A+ALFMDEISTGLD STT+QIVN+L+QTIHIL GT VISLLQPA ET DLF++IIL+
Sbjct: 342 VGPARALFMDEISTGLDSSTTYQIVNSLKQTIHILDGTAVISLLQPAPETYDLFDDIILL 401
Query: 300 SDGQIVY*GPRENV 259
SDGQIVY GPRE+V
Sbjct: 402 SDGQIVYQGPREHV 415
Score = 37.0 bits (84), Expect(3) = 4e-32
Identities = 23/65 (35%), Positives = 27/65 (41%), Gaps = 32/65 (49%)
Frame = -1
Query: 152 KKDQKQYWVRKD--------------------------------DKSKSHHATLTMKKFG 69
K DQKQYWV+KD DKSKSH A L +K+G
Sbjct: 442 KNDQKQYWVQKDQPYSFVTVQEFSEAFQSYDVGQIIGQELSTPFDKSKSHPAALAARKYG 501
Query: 68 VNKKE 54
V+K E
Sbjct: 502 VDKME 506
Score = 33.9 bits (76), Expect(3) = 4e-32
Identities = 15/19 (78%), Positives = 16/19 (84%)
Frame = -2
Query: 58 RKELLKACIAREYLRMKRN 2
+ ELLKAC AREYL MKRN
Sbjct: 504 KMELLKACFAREYLLMKRN 522
Score = 82.0 bits (201), Expect = 8e-14
Identities = 41/52 (78%), Positives = 45/52 (86%)
Frame = -2
Query: 625 ILGLDVCADTLVENDMLRGISGGQMKRVTIGEMLAGAAKALFMSEISIGLDS 470
ILGL+VCADTLV ++MLRGISGGQ KRVT GEML G A+ALFM EIS GLDS
Sbjct: 308 ILGLEVCADTLVGDEMLRGISGGQRKRVTTGEMLVGPARALFMDEISTGLDS 359