BLASTX nr result

ID: Coptis24_contig00007873 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00007873
         (1536 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631875.1| PREDICTED: UPF0183 protein At3g51130-like [V...   602   0.0  
ref|XP_003537624.1| PREDICTED: UPF0183 protein At3g51130-like [G...   578   0.0  
ref|XP_003612120.1| hypothetical protein MTR_5g021520 [Medicago ...   574   0.0  
emb|CBI17410.3| unnamed protein product [Vitis vinifera]              602   0.0  
ref|XP_004134877.1| PREDICTED: UPF0183 protein At3g51130-like [C...   573   0.0  

>ref|XP_003631875.1| PREDICTED: UPF0183 protein At3g51130-like [Vitis vinifera]
          Length = 402

 Score =  602 bits (1551), Expect(2) = 0.0
 Identities = 286/317 (90%), Positives = 298/317 (94%)
 Frame = +3

Query: 369  RLRLIEVFDVKRLQMRYGTSIIGGPSVLATFVAVYALFGPTFPGIYDKDRGVYTLFYPGL 548
            RLRLIE+FDVKRLQMRY TS+IGGPS LATFVAVYALFGPTFPG YDKDRGVYTLFYPGL
Sbjct: 86   RLRLIEIFDVKRLQMRYATSLIGGPSTLATFVAVYALFGPTFPGSYDKDRGVYTLFYPGL 145

Query: 549  SFAFPIPGQYMDCCNDGEAELPLEFPDGTTPVTCRVSIYDSSADSKVGVGSLMNKATAPP 728
            SFAFPIP QY DCC+DGEAELPLEFPDGTTPVTCRVSIYDSS DSKVGVGS M KA+APP
Sbjct: 146  SFAFPIPTQYTDCCHDGEAELPLEFPDGTTPVTCRVSIYDSSTDSKVGVGSSMEKASAPP 205

Query: 729  LPAGSIYMEEVHAKLGEELWFGVGGQHIPFGASPQDVWTDLGRPCGIHQKQVDQMVIHSA 908
            LPAGS+YMEEVH KLGEEL F VGGQHIPFGASPQDVWT+LGRPCGIHQKQVDQMVIHSA
Sbjct: 206  LPAGSLYMEEVHVKLGEELRFTVGGQHIPFGASPQDVWTELGRPCGIHQKQVDQMVIHSA 265

Query: 909  SDPRPRTTLCGDYFYNYFTRGFDILFDGQTHKIKKFVLHTNFPGHADFNSYLKCNFLIYG 1088
            SDPRPRTTLCGDYFYNYF RG DILFDGQTHKIKKFVLHTN+PGHADFNSY+KCNF+IYG
Sbjct: 266  SDPRPRTTLCGDYFYNYFDRGLDILFDGQTHKIKKFVLHTNYPGHADFNSYMKCNFVIYG 325

Query: 1089 SEGGGLFREGNASKHCITPSTKWEQVKEILGDCGRAAIQTQGSTSNPFGSTFVYGYQNVA 1268
            S+ GG F+E   SKH ITPSTKWEQVKEILGDCGRAAIQTQGST+NPFGSTFVYGYQNVA
Sbjct: 326  SDFGGSFQEVKMSKHRITPSTKWEQVKEILGDCGRAAIQTQGSTNNPFGSTFVYGYQNVA 385

Query: 1269 FEVMKNGYIATVTLFQS 1319
            FEVMKNGYIATVTLFQS
Sbjct: 386  FEVMKNGYIATVTLFQS 402



 Score =  112 bits (279), Expect(2) = 0.0
 Identities = 53/60 (88%), Positives = 56/60 (93%)
 Frame = +1

Query: 109 MQQRSRRRCEGTAMGAIVLDLRPGLGIGPFTLGMPICEAFAQIEQQPNIYDVVHVKYLDE 288
           M QR RRRCEGTAMGAIVLDL+PGLGIGPF+LGMPI +AFAQIEQQPNIYDVVHVKY DE
Sbjct: 1   MLQRPRRRCEGTAMGAIVLDLKPGLGIGPFSLGMPISKAFAQIEQQPNIYDVVHVKYFDE 60


>ref|XP_003537624.1| PREDICTED: UPF0183 protein At3g51130-like [Glycine max]
          Length = 403

 Score =  578 bits (1489), Expect(2) = 0.0
 Identities = 274/318 (86%), Positives = 294/318 (92%), Gaps = 1/318 (0%)
 Frame = +3

Query: 369  RLRLIEVFDVKRLQMRYGTSIIGGPSVLATFVAVYALFGPTFPGIYDKDRGVYTLFYPGL 548
            RLRLIE+FDVKRLQM Y TS+IGGPS LATFVAVYALFGPT+PGI+DKDR +YTLFYPGL
Sbjct: 86   RLRLIEIFDVKRLQMCYSTSLIGGPSTLATFVAVYALFGPTYPGIFDKDRRIYTLFYPGL 145

Query: 549  SFAFPIPGQYMDCCNDGEAELPLEFPDGTTPVTCRVSIYDSSADSKVGVGSLMNKATAPP 728
            SFAFPIP Q+ DCC+DG  ELPLEFPDGTTPVTCRVSIYDSS+  KVGVG+LM+KA+APP
Sbjct: 146  SFAFPIPSQFTDCCHDGGVELPLEFPDGTTPVTCRVSIYDSSSGKKVGVGALMDKASAPP 205

Query: 729  LPAGSIYMEEVHAKLGEELWFGVGGQHIPFGASPQDVWTDLGRPCGIHQKQVDQMVIHSA 908
            LPAGSIYMEEVH KLGEEL+F VG QHIPFGASPQDVWT+LGRPCGIHQKQVDQMVIHSA
Sbjct: 206  LPAGSIYMEEVHVKLGEELYFTVGSQHIPFGASPQDVWTELGRPCGIHQKQVDQMVIHSA 265

Query: 909  SDPRPRTTLCGDYFYNYFTRGFDILFDGQTHKIKKFVLHTNFPGHADFNSYLKCNFLIYG 1088
            SD RPRTTLCGDYFYNYFTRG DILFDGQTHKIKKFVLHTNFPGHADFNSY+KCNF++YG
Sbjct: 266  SDLRPRTTLCGDYFYNYFTRGLDILFDGQTHKIKKFVLHTNFPGHADFNSYIKCNFVVYG 325

Query: 1089 SEGGGLFREGNASK-HCITPSTKWEQVKEILGDCGRAAIQTQGSTSNPFGSTFVYGYQNV 1265
            S+ GG F+E N SK   ITPSTKWEQVKEILGDCGRAAIQTQGS SNPFGST VYGYQN+
Sbjct: 326  SDLGGSFQEVNNSKQRVITPSTKWEQVKEILGDCGRAAIQTQGSASNPFGSTLVYGYQNI 385

Query: 1266 AFEVMKNGYIATVTLFQS 1319
            AFEVMKNGYIAT+TLFQS
Sbjct: 386  AFEVMKNGYIATITLFQS 403



 Score =  118 bits (296), Expect(2) = 0.0
 Identities = 56/60 (93%), Positives = 57/60 (95%)
 Frame = +1

Query: 109 MQQRSRRRCEGTAMGAIVLDLRPGLGIGPFTLGMPICEAFAQIEQQPNIYDVVHVKYLDE 288
           M QR RRRCEGTAMGAIVLDLRPGLGIGPF+LGMPICEAFAQIEQQPNIYDVVHVKY DE
Sbjct: 1   MLQRPRRRCEGTAMGAIVLDLRPGLGIGPFSLGMPICEAFAQIEQQPNIYDVVHVKYFDE 60


>ref|XP_003612120.1| hypothetical protein MTR_5g021520 [Medicago truncatula]
            gi|355513455|gb|AES95078.1| hypothetical protein
            MTR_5g021520 [Medicago truncatula]
          Length = 404

 Score =  574 bits (1480), Expect(2) = 0.0
 Identities = 272/319 (85%), Positives = 295/319 (92%), Gaps = 2/319 (0%)
 Frame = +3

Query: 369  RLRLIEVFDVKRLQMRYGTSIIGGPSVLATFVAVYALFGPTFPGIYDKDRGVYTLFYPGL 548
            RLRLIE+FDVKRLQMRY TS+IGGP+ LATFVAVYALFGPT+PGI+DKDRG+YTLFYPGL
Sbjct: 86   RLRLIEIFDVKRLQMRYSTSLIGGPTTLATFVAVYALFGPTYPGIFDKDRGIYTLFYPGL 145

Query: 549  SFAFPIPGQYMDCCNDGEAELPLEFPDGTTPVTCRVSIYDSSADSKVGVGSLMNKATAPP 728
            SFAFPIPGQ+ DCC+DG  ELPLEFPDGTTPVTCRVSIYDSS+  KVGVGSLM+KA+APP
Sbjct: 146  SFAFPIPGQFTDCCHDGGVELPLEFPDGTTPVTCRVSIYDSSSGKKVGVGSLMDKASAPP 205

Query: 729  LPAGSIYMEEVHAKLGEELWFGVGGQHIPFGASPQDVWTDLGRPCGIHQKQVDQMVIHSA 908
            LP GSIYMEEVH KLGEEL+F VG QHIPFGASPQDVWT+LGRPCGIHQKQVDQMVIHSA
Sbjct: 206  LPTGSIYMEEVHVKLGEELYFTVGSQHIPFGASPQDVWTELGRPCGIHQKQVDQMVIHSA 265

Query: 909  SDPRPRTTLCGDYFYNYFTRGFDILFDGQTHKIKKFVLHTNFPGHADFNSYLKCNFLIYG 1088
            SD RPRTT+CGDYFYNYFTRG DILFDGQTHKIKKFVLHTN+PGHADFNSY+KCNF+IY 
Sbjct: 266  SDLRPRTTICGDYFYNYFTRGLDILFDGQTHKIKKFVLHTNYPGHADFNSYMKCNFVIYC 325

Query: 1089 SEG-GGLFREGNASK-HCITPSTKWEQVKEILGDCGRAAIQTQGSTSNPFGSTFVYGYQN 1262
            S+  GG F++ N SK   ITPSTKWEQVK+ILGDCGRAAIQTQGS SNPFGST VYGYQN
Sbjct: 326  SDAVGGSFQDVNNSKQRVITPSTKWEQVKDILGDCGRAAIQTQGSASNPFGSTLVYGYQN 385

Query: 1263 VAFEVMKNGYIATVTLFQS 1319
            +AFEVMKNGYIAT+TLFQS
Sbjct: 386  IAFEVMKNGYIATITLFQS 404



 Score =  117 bits (294), Expect(2) = 0.0
 Identities = 55/60 (91%), Positives = 57/60 (95%)
 Frame = +1

Query: 109 MQQRSRRRCEGTAMGAIVLDLRPGLGIGPFTLGMPICEAFAQIEQQPNIYDVVHVKYLDE 288
           M QR RRRCEGTAMGAIVLDLRPGLGIGPF+LGMPICEAFAQIEQQPN+YDVVHVKY DE
Sbjct: 1   MLQRPRRRCEGTAMGAIVLDLRPGLGIGPFSLGMPICEAFAQIEQQPNLYDVVHVKYFDE 60


>emb|CBI17410.3| unnamed protein product [Vitis vinifera]
          Length = 389

 Score =  602 bits (1551), Expect(2) = 0.0
 Identities = 286/317 (90%), Positives = 298/317 (94%)
 Frame = +3

Query: 369  RLRLIEVFDVKRLQMRYGTSIIGGPSVLATFVAVYALFGPTFPGIYDKDRGVYTLFYPGL 548
            RLRLIE+FDVKRLQMRY TS+IGGPS LATFVAVYALFGPTFPG YDKDRGVYTLFYPGL
Sbjct: 73   RLRLIEIFDVKRLQMRYATSLIGGPSTLATFVAVYALFGPTFPGSYDKDRGVYTLFYPGL 132

Query: 549  SFAFPIPGQYMDCCNDGEAELPLEFPDGTTPVTCRVSIYDSSADSKVGVGSLMNKATAPP 728
            SFAFPIP QY DCC+DGEAELPLEFPDGTTPVTCRVSIYDSS DSKVGVGS M KA+APP
Sbjct: 133  SFAFPIPTQYTDCCHDGEAELPLEFPDGTTPVTCRVSIYDSSTDSKVGVGSSMEKASAPP 192

Query: 729  LPAGSIYMEEVHAKLGEELWFGVGGQHIPFGASPQDVWTDLGRPCGIHQKQVDQMVIHSA 908
            LPAGS+YMEEVH KLGEEL F VGGQHIPFGASPQDVWT+LGRPCGIHQKQVDQMVIHSA
Sbjct: 193  LPAGSLYMEEVHVKLGEELRFTVGGQHIPFGASPQDVWTELGRPCGIHQKQVDQMVIHSA 252

Query: 909  SDPRPRTTLCGDYFYNYFTRGFDILFDGQTHKIKKFVLHTNFPGHADFNSYLKCNFLIYG 1088
            SDPRPRTTLCGDYFYNYF RG DILFDGQTHKIKKFVLHTN+PGHADFNSY+KCNF+IYG
Sbjct: 253  SDPRPRTTLCGDYFYNYFDRGLDILFDGQTHKIKKFVLHTNYPGHADFNSYMKCNFVIYG 312

Query: 1089 SEGGGLFREGNASKHCITPSTKWEQVKEILGDCGRAAIQTQGSTSNPFGSTFVYGYQNVA 1268
            S+ GG F+E   SKH ITPSTKWEQVKEILGDCGRAAIQTQGST+NPFGSTFVYGYQNVA
Sbjct: 313  SDFGGSFQEVKMSKHRITPSTKWEQVKEILGDCGRAAIQTQGSTNNPFGSTFVYGYQNVA 372

Query: 1269 FEVMKNGYIATVTLFQS 1319
            FEVMKNGYIATVTLFQS
Sbjct: 373  FEVMKNGYIATVTLFQS 389



 Score = 90.5 bits (223), Expect(2) = 0.0
 Identities = 42/47 (89%), Positives = 45/47 (95%)
 Frame = +1

Query: 148 MGAIVLDLRPGLGIGPFTLGMPICEAFAQIEQQPNIYDVVHVKYLDE 288
           MGAIVLDL+PGLGIGPF+LGMPI +AFAQIEQQPNIYDVVHVKY DE
Sbjct: 1   MGAIVLDLKPGLGIGPFSLGMPISKAFAQIEQQPNIYDVVHVKYFDE 47


>ref|XP_004134877.1| PREDICTED: UPF0183 protein At3g51130-like [Cucumis sativus]
          Length = 398

 Score =  573 bits (1476), Expect(2) = 0.0
 Identities = 273/317 (86%), Positives = 293/317 (92%)
 Frame = +3

Query: 369  RLRLIEVFDVKRLQMRYGTSIIGGPSVLATFVAVYALFGPTFPGIYDKDRGVYTLFYPGL 548
            RLRLIE+FDVKRLQMRY TS+IGGPS LATFVAVYALFGPTFPGIYDKDRGVYTLFYPGL
Sbjct: 86   RLRLIEIFDVKRLQMRYATSLIGGPSNLATFVAVYALFGPTFPGIYDKDRGVYTLFYPGL 145

Query: 549  SFAFPIPGQYMDCCNDGEAELPLEFPDGTTPVTCRVSIYDSSADSKVGVGSLMNKATAPP 728
            SFAFPIP QY DCC+DGEAELPLEFPDGTTPV CRVSI+DSS   KVG+G+LM+KA+APP
Sbjct: 146  SFAFPIPSQYTDCCHDGEAELPLEFPDGTTPVACRVSIFDSSTVKKVGIGALMDKASAPP 205

Query: 729  LPAGSIYMEEVHAKLGEELWFGVGGQHIPFGASPQDVWTDLGRPCGIHQKQVDQMVIHSA 908
            LPA S+YMEEVH KLG+EL+F VG QHIPFGASPQD+WT+LGRPCGIHQKQVDQMVIHSA
Sbjct: 206  LPASSLYMEEVHVKLGDELYFAVGSQHIPFGASPQDIWTELGRPCGIHQKQVDQMVIHSA 265

Query: 909  SDPRPRTTLCGDYFYNYFTRGFDILFDGQTHKIKKFVLHTNFPGHADFNSYLKCNFLIYG 1088
            SDPRPRTTLCGDYFYNYFTRG DILFDGQTHKIKKFVLHTN+PGHADFNSY+KCNF+I+ 
Sbjct: 266  SDPRPRTTLCGDYFYNYFTRGLDILFDGQTHKIKKFVLHTNYPGHADFNSYIKCNFVIHV 325

Query: 1089 SEGGGLFREGNASKHCITPSTKWEQVKEILGDCGRAAIQTQGSTSNPFGSTFVYGYQNVA 1268
            S   G F E N  K+ ITPSTKWE VKEILGDCGRAAIQTQGST+NPFGSTFVYGYQNVA
Sbjct: 326  S---GSFDETNC-KNTITPSTKWEDVKEILGDCGRAAIQTQGSTNNPFGSTFVYGYQNVA 381

Query: 1269 FEVMKNGYIATVTLFQS 1319
            FEVMKNGYIATVTLF+S
Sbjct: 382  FEVMKNGYIATVTLFKS 398



 Score =  119 bits (297), Expect(2) = 0.0
 Identities = 55/60 (91%), Positives = 58/60 (96%)
 Frame = +1

Query: 109 MQQRSRRRCEGTAMGAIVLDLRPGLGIGPFTLGMPICEAFAQIEQQPNIYDVVHVKYLDE 288
           MQQRSRRRCEGTAMGAIVLDL+PGLG+GPF LGMPICEAFAQIEQ+PNIYDVVHVKY DE
Sbjct: 1   MQQRSRRRCEGTAMGAIVLDLQPGLGLGPFNLGMPICEAFAQIEQRPNIYDVVHVKYFDE 60