BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00007866
         (1852 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ...    87   1e-14
ref|XP_003607073.1| hypothetical protein MTR_4g071930 [Medicago ...    87   2e-14
emb|CAN61375.1| hypothetical protein VITISV_037805 [Vitis vinifera]    86   4e-14
gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptas...    85   6e-14
emb|CCA66140.1| hypothetical protein [Beta vulgaris subsp. vulga...    82   4e-13

>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein
           [Arabidopsis thaliana]
          Length = 1223

 Score = 87.4 bits (215), Expect = 1e-14
 Identities = 65/233 (27%), Positives = 106/233 (45%), Gaps = 15/233 (6%)
 Frame = -1

Query: 655 MKTIFWNIRGVVKENGRERLREMIYSHSPDIVCLAEPLVKPQ--TSFLNDFRLDYFENSI 482
           M   FWN+RG+ K +    +++ I  ++    CL E  VK    +  +     D+   SI
Sbjct: 1   MSGFFWNVRGLNKSSKHSVIKKWIEENNFQFGCLVETRVKESKVSQLVGKLFKDW---SI 57

Query: 481 IHNDSQSRLGNLWIFCKIGIDMRVVLVTEQHISVLV------NDCVLSFVHASCSLILRR 320
           + N   +R G +W+  +  + +  +  + Q ++  V      ++   SFV+AS  +  R+
Sbjct: 58  LTNYEHNRRGRIWVLWRKNVRLSPIYKSCQLLTCSVKLEDRQDEFFCSFVYASNYVEERK 117

Query: 319 ELWQDLK-----LINTTSPWVVIGDFNVVLRNEE--KKGIRAPSRVAMRDFNNFVNEIEL 161
            LW +LK      I    PW ++GDFN  L   E  +  +       MRDF   +N   L
Sbjct: 118 VLWSELKDHYDSPIIRHKPWTLLGDFNETLDIAEHSQSFVHPMVTPGMRDFQQVINYCSL 177

Query: 160 LESTWEGMKFTWCNNQLGYRRVTSRLDRVFYNEAWNLKFAGWKYKAEARYASD 2
            +   +G  FTWCN +  +  +  +LDRV  N+ WN  F+      EA   SD
Sbjct: 178 TDMAAQGPLFTWCNKR-EHGLIMKKLDRVLINDCWNQTFSQSYSVFEAGGCSD 229


>ref|XP_003607073.1| hypothetical protein MTR_4g071930 [Medicago truncatula]
            gi|355508128|gb|AES89270.1| hypothetical protein
            MTR_4g071930 [Medicago truncatula]
          Length = 285

 Score = 87.0 bits (214), Expect = 2e-14
 Identities = 46/96 (47%), Positives = 60/96 (62%)
 Frame = -1

Query: 1822 IRFPGLSLEYWELKTLFSLGRAVGRPIHTDENTAKRKLGYYASVLVDVDLTQKIPEKIWV 1643
            I   GLS EYW  KTLF +  A+G P+  DE T+KR  G+YA VL++VDLT ++ E+I V
Sbjct: 89   IHLHGLSQEYWCKKTLFEIAGALGIPLALDEVTSKRTFGHYARVLIEVDLTLEMRERILV 148

Query: 1642 EVSGRDIKF*QKVDTGTLPKFCNHCKRVGHLVTECR 1535
            E   +D  F   V+   LP FCN C+ VGH V  C+
Sbjct: 149  E--RKDFDFYVDVEFEKLPPFCNSCQIVGHYVKNCK 182


>emb|CAN61375.1| hypothetical protein VITISV_037805 [Vitis vinifera]
          Length = 1765

 Score = 85.5 bits (210), Expect = 4e-14
 Identities = 69/228 (30%), Positives = 107/228 (46%), Gaps = 8/228 (3%)
 Frame = -1

Query: 661  FSMKTIFWNIRGVVKENGRERLREMIYSHSPDIVCLAEPLVKP-QTSFLNDFRLDYFENS 485
            FS + I WN+RG+   N R  +++ + S +PD V + E   +     F+        ++ 
Sbjct: 758  FSHEIISWNVRGLGSRNKRRMVKDFLRSENPDXVMIQETKKENCDRRFVGSVXTXRNKDW 817

Query: 484  IIHNDSQSRLGNLWIFCKIGIDMRVVLVTEQHISVL--VNDCV---LSFVHASCSLILRR 320
            +    S +  G L I+    +    V++    +SV   ++ C    +S V+   S  L +
Sbjct: 818  VALPXSGASXGILIIWDSKNLRREEVVIGSFSVSVKFSLDGCGPLWISTVYGPNSPSLTK 877

Query: 319  ELWQDL-KLINTTSP-WVVIGDFNVVLRNEEKKGIRAPSRVAMRDFNNFVNEIELLESTW 146
            + W +L  +   T P W V GDFNV+ R+ EK G  +    +MRDF++F+ E ELL+   
Sbjct: 878  DFWVELFDIYGLTYPLWCVGGDFNVIRRSSEKMG-GSSLTPSMRDFDSFIRECELLDPPL 936

Query: 145  EGMKFTWCNNQLGYRRVTSRLDRVFYNEAWNLKFAGWKYKAEARYASD 2
                FTW N Q     V  RLDR  Y+  W L F     +A  R  SD
Sbjct: 937  RNASFTWSNMQ--ESPVCKRLDRFLYSNEWGLLFPQGLQEALIRRTSD 982


>gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease
           H; Endonuclease/exonuclease/phosphatase [Medicago
           truncatula]
          Length = 1246

 Score = 85.1 bits (209), Expect = 6e-14
 Identities = 59/211 (27%), Positives = 100/211 (47%), Gaps = 11/211 (5%)
 Frame = -1

Query: 655 MKTIFWNIRGVVKENGRERLREMIYSHSPDIVCLAEPLVKPQTSFLNDFRLDYFENSI-- 482
           M  ++W +RG+   + +  L+     H P ++ +AEP++  ++         ++ +SI  
Sbjct: 1   MIILYWTVRGIDNVDTKIALKNFFNCHKPLLIFVAEPMIAFESV------PPWYWDSIGV 54

Query: 481 ---IHNDSQSRLGNLWIFCKIGIDMRVVLVTEQHISVLVN----DCVLSFVHASCSLILR 323
                N  +    NLW      +   V+ +++Q I++ ++       ++ V+AS   + R
Sbjct: 55  SKYCVNGREILQPNLWALWGREVSAIVMFISDQCIALEISCHQSTVYVAAVYASTFYLKR 114

Query: 322 RELWQDLKLINTT--SPWVVIGDFNVVLRNEEKKGIRAPSRVAMRDFNNFVNEIELLEST 149
           R+LW +L  +      PW+ IGDFN VL   EK+  R P  ++  DF N+ N   L    
Sbjct: 115 RQLWAELTNLQGCFQGPWLFIGDFNAVLGAHEKRRRRPPPPLSCIDFMNWSNANLLHHLP 174

Query: 148 WEGMKFTWCNNQLGYRRVTSRLDRVFYNEAW 56
             G  +TW N +LG   V  RLDR   NE W
Sbjct: 175 TLGAFYTWSNGRLGSDNVALRLDRAICNEEW 205


>emb|CCA66140.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1381

 Score = 82.4 bits (202), Expect = 4e-13
 Identities = 65/229 (28%), Positives = 101/229 (44%), Gaps = 11/229 (4%)
 Frame = -1

Query: 655 MKTIFWNIRGVVKENGRERLREMIYSHSPDIVCLAEPLVK--PQTSFLNDFRLDYFENSI 482
           M  I WN+RG+     R  LR+ I  H P  V + E  ++  P+    + ++ D  E   
Sbjct: 1   MSVISWNVRGLGSRAKRSSLRKHITKHEPTFVFIQETKMEEMPEKIMRSIWKSDNVE--W 58

Query: 481 IHNDSQSRLGNLWIFCKIGIDMRVVLVTEQHISVLVN-------DCVLSFVHASCSLILR 323
           I + SQ   G +          +   + ++H   +         DC+L  V+ SC   +R
Sbjct: 59  IISPSQGNSGGILSIWNTSFFAKKSSIIKRHWIAIKGSLVSHNFDCILINVYNSCLASIR 118

Query: 322 RELWQDLKLI--NTTSPWVVIGDFNVVLRNEEKKGIRAPSRVAMRDFNNFVNEIELLEST 149
            E+W +++        P ++IGDFN VL + E++ + A S+  M  F +FV  ++LLE  
Sbjct: 119 AEVWTEIRDFWKECALPSLIIGDFNEVLNSSERRSLIA-SQSEMTKFRDFVQNLQLLEIP 177

Query: 148 WEGMKFTWCNNQLGYRRVTSRLDRVFYNEAWNLKFAGWKYKAEARYASD 2
                FTW           S LDR+F N  W + F G K     R  SD
Sbjct: 178 SSSGGFTWFRG-----NSKSLLDRLFINPEWLILFPGLKLSLLMRGLSD 221