BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00007857
         (577 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AGE46018.1| cytochrome c oxidase subunit 5C [Elaeis guineensis]    113   3e-23
ref|XP_002862722.1| cytochrome c oxidase subunit VC family prote...   111   7e-23
ref|XP_002515282.1| Cytochrome c oxidase polypeptide Vc, putativ...   111   1e-22
ref|XP_002282099.1| PREDICTED: cytochrome c oxidase subunit 5C [...   110   1e-22
sp|Q9LZQ0.1|CX5C2_ARATH RecName: Full=Cytochrome c oxidase subun...   110   2e-22

>gb|AGE46018.1| cytochrome c oxidase subunit 5C [Elaeis guineensis]
          Length = 63

 Score =  113 bits (282), Expect = 3e-23
 Identities = 53/63 (84%), Positives = 56/63 (88%)
 Frame = +3

Query: 84  MAAHKIAHATLKGPSLVKEICIGITLGLFAGGLWKMHHWNEQRKVREFYHMLNRGEISVV 263
           MAAHKIAHATL+GPS+VKEI IGITLGLFAG LWKMHHWNEQRK R FY ML +GEISVV
Sbjct: 1   MAAHKIAHATLRGPSVVKEIFIGITLGLFAGSLWKMHHWNEQRKTRAFYDMLEKGEISVV 60

Query: 264 AEE 272
            EE
Sbjct: 61  VEE 63


>ref|XP_002862722.1| cytochrome c oxidase subunit VC family protein [Arabidopsis lyrata
           subsp. lyrata] gi|297817580|ref|XP_002876673.1|
           cytochrome c oxidase subunit VC family protein
           [Arabidopsis lyrata subsp. lyrata]
           gi|297308410|gb|EFH38980.1| cytochrome c oxidase subunit
           VC family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297322511|gb|EFH52932.1| cytochrome c oxidase subunit
           VC family protein [Arabidopsis lyrata subsp. lyrata]
          Length = 64

 Score =  111 bits (278), Expect = 7e-23
 Identities = 51/64 (79%), Positives = 56/64 (87%)
 Frame = +3

Query: 84  MAAHKIAHATLKGPSLVKEICIGITLGLFAGGLWKMHHWNEQRKVREFYHMLNRGEISVV 263
           MA HK+AHATLKGPS+VKE+ IG+TLGL AGGLWKMHHWNEQRK R FY +L RGEISVV
Sbjct: 1   MAGHKVAHATLKGPSVVKELIIGLTLGLAAGGLWKMHHWNEQRKTRTFYDLLERGEISVV 60

Query: 264 AEEE 275
           A EE
Sbjct: 61  AAEE 64


>ref|XP_002515282.1| Cytochrome c oxidase polypeptide Vc, putative [Ricinus communis]
           gi|255559374|ref|XP_002520707.1| Cytochrome c oxidase
           polypeptide Vc, putative [Ricinus communis]
           gi|223540092|gb|EEF41669.1| Cytochrome c oxidase
           polypeptide Vc, putative [Ricinus communis]
           gi|223545762|gb|EEF47266.1| Cytochrome c oxidase
           polypeptide Vc, putative [Ricinus communis]
          Length = 63

 Score =  111 bits (277), Expect = 1e-22
 Identities = 52/63 (82%), Positives = 56/63 (88%)
 Frame = +3

Query: 84  MAAHKIAHATLKGPSLVKEICIGITLGLFAGGLWKMHHWNEQRKVREFYHMLNRGEISVV 263
           MA  +IAHATLKGPS+VKEICIGI LGL AGGLWKMHHWNEQRKVR FY +L +GEISVV
Sbjct: 1   MAGGRIAHATLKGPSVVKEICIGIALGLAAGGLWKMHHWNEQRKVRAFYDLLEKGEISVV 60

Query: 264 AEE 272
           AEE
Sbjct: 61  AEE 63


>ref|XP_002282099.1| PREDICTED: cytochrome c oxidase subunit 5C [Vitis vinifera]
           gi|296089777|emb|CBI39596.3| unnamed protein product
           [Vitis vinifera]
          Length = 63

 Score =  110 bits (276), Expect = 1e-22
 Identities = 50/63 (79%), Positives = 56/63 (88%)
 Frame = +3

Query: 84  MAAHKIAHATLKGPSLVKEICIGITLGLFAGGLWKMHHWNEQRKVREFYHMLNRGEISVV 263
           MAAHKIAHATLKGPS+VKEICIG TLGL AGGLWKMHHWNEQ+K+R FY ML + +ISVV
Sbjct: 1   MAAHKIAHATLKGPSVVKEICIGATLGLLAGGLWKMHHWNEQKKLRTFYDMLEKDQISVV 60

Query: 264 AEE 272
            +E
Sbjct: 61  VDE 63


>sp|Q9LZQ0.1|CX5C2_ARATH RecName: Full=Cytochrome c oxidase subunit 5C-2; AltName:
           Full=Cytochrome c oxidase polypeptide Vc-2
           gi|7340711|emb|CAB82954.1| cytochrome c oxidase subunit
           5c-like protein [Arabidopsis thaliana]
          Length = 64

 Score =  110 bits (275), Expect = 2e-22
 Identities = 50/64 (78%), Positives = 55/64 (85%)
 Frame = +3

Query: 84  MAAHKIAHATLKGPSLVKEICIGITLGLFAGGLWKMHHWNEQRKVREFYHMLNRGEISVV 263
           MA HK+AHATLKGPS+VKE+ IG+TLGL AGGLWKMHHWNEQRK R FY +L RGEI VV
Sbjct: 1   MAGHKVAHATLKGPSVVKELIIGLTLGLAAGGLWKMHHWNEQRKTRTFYDLLERGEIGVV 60

Query: 264 AEEE 275
           A EE
Sbjct: 61  ASEE 64