BLASTX nr result

ID: Coptis24_contig00007849 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00007849
         (522 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK23235.1| unknown [Picea sitchensis]                              79   3e-29
ref|XP_003591008.1| Mitochondrial import inner membrane transloc...    75   7e-28
ref|XP_002319066.1| predicted protein [Populus trichocarpa] gi|2...    79   7e-28
emb|CAN70489.1| hypothetical protein VITISV_008665 [Vitis vinifera]    76   1e-27
ref|XP_002285554.1| PREDICTED: mitochondrial import inner membra...    76   2e-27

>gb|ABK23235.1| unknown [Picea sitchensis]
          Length = 189

 Score = 79.3 bits (194), Expect(2) = 3e-29
 Identities = 34/59 (57%), Positives = 46/59 (77%)
 Frame = +1

Query: 67  DLLFQEEAGIQRRSWGENVAYYTGSGYLTGILLGGSRGIYEGIRSGEKGESRKIRVSRL 243
           + LFQEEA +QRRSWGEN+ YYTG GYL G + G S G+ EG+++ E G+S K+RV+R+
Sbjct: 43  EFLFQEEAAVQRRSWGENITYYTGCGYLLGAVSGASVGLVEGLKAREPGDSMKLRVNRV 101



 Score = 74.3 bits (181), Expect(2) = 3e-29
 Identities = 34/59 (57%), Positives = 45/59 (76%)
 Frame = +3

Query: 237 STGARGSKLGNSLAALGLIYAGLETGIVGYRNTNDVWNNVLAGLGTGSFYKLASGPRTA 413
           ++G  G K GN L  +GL+YAGLE+GIV  R T+D+ N+V AGLGTG+ YK A+GPR+A
Sbjct: 104 ASGHTGRKFGNRLGVIGLLYAGLESGIVAGRGTDDILNSVCAGLGTGALYKAAAGPRSA 162


>ref|XP_003591008.1| Mitochondrial import inner membrane translocase subunit tim23
           [Medicago truncatula] gi|355480056|gb|AES61259.1|
           Mitochondrial import inner membrane translocase subunit
           tim23 [Medicago truncatula]
          Length = 185

 Score = 75.5 bits (184), Expect(2) = 7e-28
 Identities = 33/57 (57%), Positives = 45/57 (78%)
 Frame = +1

Query: 73  LFQEEAGIQRRSWGENVAYYTGSGYLTGILLGGSRGIYEGIRSGEKGESRKIRVSRL 243
           LFQE+   + RSWGENV YYTG+GYL+G ++GG+RG  +G+R  E GES K+RV+R+
Sbjct: 41  LFQEDIIRKHRSWGENVQYYTGTGYLSGAIIGGARGTVQGLREAEAGESVKLRVNRV 97



 Score = 73.6 bits (179), Expect(2) = 7e-28
 Identities = 34/59 (57%), Positives = 47/59 (79%)
 Frame = +3

Query: 237 STGARGSKLGNSLAALGLIYAGLETGIVGYRNTNDVWNNVLAGLGTGSFYKLASGPRTA 413
           S G  G +LGNSL  LGLI+AGLE+G+  +R+T+D+ N+ +AGLGTG+ YK A+GPR+A
Sbjct: 100 SGGQGGRRLGNSLGVLGLIFAGLESGMTYFRDTDDLVNSAVAGLGTGAIYKAAAGPRSA 158


>ref|XP_002319066.1| predicted protein [Populus trichocarpa] gi|222857442|gb|EEE94989.1|
           predicted protein [Populus trichocarpa]
          Length = 180

 Score = 79.0 bits (193), Expect(2) = 7e-28
 Identities = 35/59 (59%), Positives = 47/59 (79%)
 Frame = +1

Query: 67  DLLFQEEAGIQRRSWGENVAYYTGSGYLTGILLGGSRGIYEGIRSGEKGESRKIRVSRL 243
           + LF EE+  QRRSW EN+ YYTG+GYL+G +LGG++G  EGIR+ E GES K+RV+R+
Sbjct: 34  EFLFHEESLTQRRSWSENLQYYTGTGYLSGAILGGAKGSIEGIRAAEPGESLKLRVNRV 92



 Score = 70.1 bits (170), Expect(2) = 7e-28
 Identities = 31/59 (52%), Positives = 45/59 (76%)
 Frame = +3

Query: 237 STGARGSKLGNSLAALGLIYAGLETGIVGYRNTNDVWNNVLAGLGTGSFYKLASGPRTA 413
           S G  G K GN+L  LGL++AG+E+G++ +R+T+D+ N VLAGL TG+ Y+ A GPR+A
Sbjct: 95  SGGHAGRKFGNNLGVLGLMFAGIESGLIHWRDTDDLVNTVLAGLSTGAIYRAAKGPRSA 153


>emb|CAN70489.1| hypothetical protein VITISV_008665 [Vitis vinifera]
          Length = 450

 Score = 75.9 bits (185), Expect(2) = 1e-27
 Identities = 33/59 (55%), Positives = 47/59 (79%)
 Frame = +1

Query: 67  DLLFQEEAGIQRRSWGENVAYYTGSGYLTGILLGGSRGIYEGIRSGEKGESRKIRVSRL 243
           + LF EE+  QRRSW EN+ YYTGSGYL+G ++GG++G  EGIR+ E G++ K+RV+R+
Sbjct: 36  EYLFDEESLHQRRSWSENLQYYTGSGYLSGAIIGGAKGSIEGIRAAEAGDTLKLRVNRV 94



 Score = 72.0 bits (175), Expect(2) = 1e-27
 Identities = 31/59 (52%), Positives = 47/59 (79%)
 Frame = +3

Query: 237 STGARGSKLGNSLAALGLIYAGLETGIVGYRNTNDVWNNVLAGLGTGSFYKLASGPRTA 413
           S G  G + GNS+  LGLI++GLE+G++ +R+T+D+ N+V AGLGTG+ Y+ A+GPR+A
Sbjct: 97  SGGQTGRRFGNSMGVLGLIFSGLESGMIHWRDTDDMLNSVFAGLGTGALYRAAAGPRSA 155


>ref|XP_002285554.1| PREDICTED: mitochondrial import inner membrane translocase subunit
           tim23 [Vitis vinifera] gi|296082145|emb|CBI21150.3|
           unnamed protein product [Vitis vinifera]
          Length = 182

 Score = 75.9 bits (185), Expect(2) = 2e-27
 Identities = 33/59 (55%), Positives = 47/59 (79%)
 Frame = +1

Query: 67  DLLFQEEAGIQRRSWGENVAYYTGSGYLTGILLGGSRGIYEGIRSGEKGESRKIRVSRL 243
           + LF EE+  QRRSW EN+ YYTGSGYL+G ++GG++G  EGIR+ E G++ K+RV+R+
Sbjct: 36  EYLFDEESLHQRRSWSENLQYYTGSGYLSGAIIGGAKGSIEGIRAAEAGDTLKLRVNRV 94



 Score = 72.0 bits (175), Expect(2) = 2e-27
 Identities = 31/59 (52%), Positives = 47/59 (79%)
 Frame = +3

Query: 237 STGARGSKLGNSLAALGLIYAGLETGIVGYRNTNDVWNNVLAGLGTGSFYKLASGPRTA 413
           S G  G + GNS+  LGLI++GLE+G++ +R+T+D+ N+V AGLGTG+ Y+ A+GPR+A
Sbjct: 97  SGGQTGRRFGNSMGVLGLIFSGLESGMIHWRDTDDMLNSVFAGLGTGALYRAAAGPRSA 155


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