BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00007825
         (1293 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN64677.1| hypothetical protein VITISV_024917 [Vitis vinifera]   515   e-144
ref|XP_002528905.1| tRNA-dihydrouridine synthase, putative [Rici...   514   e-143
ref|XP_004143428.1| PREDICTED: tRNA-dihydrouridine(20) synthase ...   499   e-139
ref|XP_004160928.1| PREDICTED: tRNA-dihydrouridine(20) synthase ...   497   e-138
ref|XP_003516878.1| PREDICTED: tRNA-dihydrouridine synthase 2-li...   495   e-138

>emb|CAN64677.1| hypothetical protein VITISV_024917 [Vitis vinifera]
          Length = 326

 Score =  515 bits (1327), Expect = e-144
 Identities = 247/317 (77%), Positives = 290/317 (91%)
 Frame = -3

Query: 1216 MDYNNKLVLAPMVRVGTLPLRLLAAEYGADITYGEEIIDHKFVKCERIVNESLGSIDFVE 1037
            M+Y N+LVLAPMVRVGTLP RLLAA+YGADITYGEEIIDHK +KCER +NE +GSIDFVE
Sbjct: 1    MEYGNRLVLAPMVRVGTLPFRLLAAQYGADITYGEEIIDHKLIKCERRLNEDIGSIDFVE 60

Query: 1036 KGTGTVVFRTCNEERNRVVFQIGTSDAVRALNAAQIVCKDVAAIDINMGCPKPFSTTGGM 857
            KGT  VVFRTC+EE+NRVVFQ+GTS+A RAL AAQIVCKDVAA+DINMGCPK FS +GGM
Sbjct: 61   KGTHNVVFRTCHEEKNRVVFQMGTSNAERALTAAQIVCKDVAAVDINMGCPKSFSISGGM 120

Query: 856  GAAILSKPELIHDILTTLKRNLDLAVTCKIRLLKSSKDTVELVRRIEKTGVSALAVHGRR 677
            GAA+L++PELIHDILT LKRNLD+ VTCKIRLLKSS++TVEL ++IEKTGV+ALAVHGRR
Sbjct: 121  GAALLTRPELIHDILTILKRNLDIPVTCKIRLLKSSQETVELAQQIEKTGVAALAVHGRR 180

Query: 676  VADRPKDPARWSEIADIVAALSIPVVANGDVFEYEDIQRIKKTTGASSVMVARGALWNAS 497
            +ADRP+DPA+W+EIAD+VAALSIPV+ANGDVF Y+D QRIK  TGASSVMVARGALWNAS
Sbjct: 181  IADRPRDPAKWNEIADVVAALSIPVIANGDVFGYDDFQRIKVATGASSVMVARGALWNAS 240

Query: 496  IFSPTEKLPWEDLKIEYVRKSILWDNDVRSTKHTLREMIGHYMSLELSEGKALVKTETLA 317
            +FSP  K+PWED+K EY+RKSILWDND++STKHTL+EMI H+  LEL EGKA++K+ETLA
Sbjct: 241  VFSPEGKVPWEDVKXEYIRKSILWDNDIKSTKHTLKEMIMHHSCLELPEGKAVIKSETLA 300

Query: 316  DVAELYGEMKYYRAVKG 266
            D+A+LYGE KYY+ V+G
Sbjct: 301  DLAKLYGEEKYYQFVRG 317


>ref|XP_002528905.1| tRNA-dihydrouridine synthase, putative [Ricinus communis]
            gi|223531659|gb|EEF33485.1| tRNA-dihydrouridine synthase,
            putative [Ricinus communis]
          Length = 330

 Score =  514 bits (1325), Expect = e-143
 Identities = 254/315 (80%), Positives = 282/315 (89%)
 Frame = -3

Query: 1216 MDYNNKLVLAPMVRVGTLPLRLLAAEYGADITYGEEIIDHKFVKCERIVNESLGSIDFVE 1037
            M+Y NKLVLAPMVRVGTLP RLLAAEYGADITYGEEIIDHK +KCER VNE +G  DFVE
Sbjct: 1    MEYENKLVLAPMVRVGTLPFRLLAAEYGADITYGEEIIDHKLLKCERKVNEYIGCTDFVE 60

Query: 1036 KGTGTVVFRTCNEERNRVVFQIGTSDAVRALNAAQIVCKDVAAIDINMGCPKPFSTTGGM 857
            KGT  VVFRTCNEE+NRVVFQ+GTSDAVRAL AAQ+VCKDVAAIDINMGCPK FS +GGM
Sbjct: 61   KGTENVVFRTCNEEKNRVVFQMGTSDAVRALTAAQMVCKDVAAIDINMGCPKSFSISGGM 120

Query: 856  GAAILSKPELIHDILTTLKRNLDLAVTCKIRLLKSSKDTVELVRRIEKTGVSALAVHGRR 677
            GAA+L+KPELIHDILTTLKRNLD  VTCKIRLLKS +DTVEL RRIEKTGVSALAVHGR+
Sbjct: 121  GAALLTKPELIHDILTTLKRNLDSPVTCKIRLLKSPQDTVELARRIEKTGVSALAVHGRK 180

Query: 676  VADRPKDPARWSEIADIVAALSIPVVANGDVFEYEDIQRIKKTTGASSVMVARGALWNAS 497
            VADRP+DPA+WSEIADIV+ LSIPV+ANGDVF+Y D +RIK  TGASSVMVARGALWNAS
Sbjct: 181  VADRPRDPAKWSEIADIVSTLSIPVIANGDVFDYGDFERIKAATGASSVMVARGALWNAS 240

Query: 496  IFSPTEKLPWEDLKIEYVRKSILWDNDVRSTKHTLREMIGHYMSLELSEGKALVKTETLA 317
            IFSP  K+ WED+K EYVRKSILWDNDV+STKHTL+EMI HY  LEL EGK ++K+ETLA
Sbjct: 241  IFSPKGKVHWEDVKREYVRKSILWDNDVKSTKHTLKEMIMHYSCLELPEGKGVIKSETLA 300

Query: 316  DVAELYGEMKYYRAV 272
            D+A+ YGE +YY+ V
Sbjct: 301  DIAKFYGEERYYQLV 315


>ref|XP_004143428.1| PREDICTED: tRNA-dihydrouridine(20) synthase [NAD(P)+]-like [Cucumis
            sativus]
          Length = 325

 Score =  499 bits (1285), Expect = e-139
 Identities = 241/316 (76%), Positives = 283/316 (89%)
 Frame = -3

Query: 1216 MDYNNKLVLAPMVRVGTLPLRLLAAEYGADITYGEEIIDHKFVKCERIVNESLGSIDFVE 1037
            MDY NK VLAPMVRVGTLP RLLA++YGADITYGEEIIDHK +KCER +NE +GS DFVE
Sbjct: 1    MDYENKFVLAPMVRVGTLPFRLLASQYGADITYGEEIIDHKMIKCERRLNEHVGSTDFVE 60

Query: 1036 KGTGTVVFRTCNEERNRVVFQIGTSDAVRALNAAQIVCKDVAAIDINMGCPKPFSTTGGM 857
            KGT  VVFRTC+ ER  VVFQ+GTS+A RAL+AAQ+VC+DVAAIDINMGCPK FS +GGM
Sbjct: 61   KGTNNVVFRTCSLERKHVVFQMGTSNAARALSAAQLVCQDVAAIDINMGCPKSFSISGGM 120

Query: 856  GAAILSKPELIHDILTTLKRNLDLAVTCKIRLLKSSKDTVELVRRIEKTGVSALAVHGRR 677
            GAA+L+KP+LIHDILTTL+RNL++ +TCKIRLL S +DTVEL RRIE TGVSAL VHGRR
Sbjct: 121  GAALLNKPDLIHDILTTLRRNLNILITCKIRLLNSPQDTVELARRIESTGVSALGVHGRR 180

Query: 676  VADRPKDPARWSEIADIVAALSIPVVANGDVFEYEDIQRIKKTTGASSVMVARGALWNAS 497
            VADRP+DPA+WSEIAD+VAAL+IPV+ANGD+FEY+D QRIK  TGASS+MVARGALWNAS
Sbjct: 181  VADRPRDPAKWSEIADVVAALTIPVIANGDIFEYDDFQRIKVHTGASSMMVARGALWNAS 240

Query: 496  IFSPTEKLPWEDLKIEYVRKSILWDNDVRSTKHTLREMIGHYMSLELSEGKALVKTETLA 317
            IFSP  KLPWED+K EYVRKSILWDND++STK+TL+EMI H+  LEL EGKA++K+E+LA
Sbjct: 241  IFSPEGKLPWEDVKREYVRKSILWDNDIKSTKYTLKEMIMHHSCLELPEGKAVIKSESLA 300

Query: 316  DVAELYGEMKYYRAVK 269
            D+A+LYGE KYY+ V+
Sbjct: 301  DLAKLYGEEKYYQFVQ 316


>ref|XP_004160928.1| PREDICTED: tRNA-dihydrouridine(20) synthase [NAD(P)+]-like [Cucumis
            sativus]
          Length = 325

 Score =  497 bits (1280), Expect = e-138
 Identities = 240/316 (75%), Positives = 283/316 (89%)
 Frame = -3

Query: 1216 MDYNNKLVLAPMVRVGTLPLRLLAAEYGADITYGEEIIDHKFVKCERIVNESLGSIDFVE 1037
            MDY NK VLAPMVRVGTLP RLLA+++GADITYGEEIIDHK +KCER +NE +GS DFVE
Sbjct: 1    MDYENKFVLAPMVRVGTLPFRLLASQHGADITYGEEIIDHKMIKCERRLNEHVGSTDFVE 60

Query: 1036 KGTGTVVFRTCNEERNRVVFQIGTSDAVRALNAAQIVCKDVAAIDINMGCPKPFSTTGGM 857
            KGT  VVFRTC+ ER  VVFQ+GTS+A RAL+AAQ+VC+DVAAIDINMGCPK FS +GGM
Sbjct: 61   KGTNNVVFRTCSLERKHVVFQMGTSNAARALSAAQLVCQDVAAIDINMGCPKSFSISGGM 120

Query: 856  GAAILSKPELIHDILTTLKRNLDLAVTCKIRLLKSSKDTVELVRRIEKTGVSALAVHGRR 677
            GAA+L+KP+LIHDILTTL+RNL++ +TCKIRLL S +DTVEL RRIE TGVSAL VHGRR
Sbjct: 121  GAALLNKPDLIHDILTTLRRNLNILITCKIRLLNSPQDTVELARRIESTGVSALGVHGRR 180

Query: 676  VADRPKDPARWSEIADIVAALSIPVVANGDVFEYEDIQRIKKTTGASSVMVARGALWNAS 497
            VADRP+DPA+WSEIAD+VAAL+IPV+ANGD+FEY+D QRIK  TGASS+MVARGALWNAS
Sbjct: 181  VADRPRDPAKWSEIADVVAALTIPVIANGDIFEYDDFQRIKVHTGASSMMVARGALWNAS 240

Query: 496  IFSPTEKLPWEDLKIEYVRKSILWDNDVRSTKHTLREMIGHYMSLELSEGKALVKTETLA 317
            IFSP  KLPWED+K EYVRKSILWDND++STK+TL+EMI H+  LEL EGKA++K+E+LA
Sbjct: 241  IFSPEGKLPWEDVKREYVRKSILWDNDIKSTKYTLKEMIMHHSCLELPEGKAVIKSESLA 300

Query: 316  DVAELYGEMKYYRAVK 269
            D+A+LYGE KYY+ V+
Sbjct: 301  DLAKLYGEEKYYQFVQ 316


>ref|XP_003516878.1| PREDICTED: tRNA-dihydrouridine synthase 2-like isoform 1 [Glycine
            max]
          Length = 320

 Score =  495 bits (1275), Expect = e-138
 Identities = 240/316 (75%), Positives = 281/316 (88%)
 Frame = -3

Query: 1216 MDYNNKLVLAPMVRVGTLPLRLLAAEYGADITYGEEIIDHKFVKCERIVNESLGSIDFVE 1037
            M+Y NKLVLAPMVRVGTLP RLLAA+YGADITYGEEIIDHK +KC+R +NE +GS DFVE
Sbjct: 1    MEYRNKLVLAPMVRVGTLPFRLLAAQYGADITYGEEIIDHKMLKCDRQINELIGSTDFVE 60

Query: 1036 KGTGTVVFRTCNEERNRVVFQIGTSDAVRALNAAQIVCKDVAAIDINMGCPKPFSTTGGM 857
            KGT  VVFRTC+EE++ VVFQIGTSDAVRAL  AQ+VC DVAA+DINMGCPK FS +GGM
Sbjct: 61   KGTKNVVFRTCDEEKDTVVFQIGTSDAVRALATAQLVCNDVAAVDINMGCPKSFSVSGGM 120

Query: 856  GAAILSKPELIHDILTTLKRNLDLAVTCKIRLLKSSKDTVELVRRIEKTGVSALAVHGRR 677
            GAA+LSKPELIHDILTTL+RNL+  VTCKIRLLKS  DTVEL RRIEKTGVSALAVHGR+
Sbjct: 121  GAALLSKPELIHDILTTLRRNLNTPVTCKIRLLKSPHDTVELARRIEKTGVSALAVHGRK 180

Query: 676  VADRPKDPARWSEIADIVAALSIPVVANGDVFEYEDIQRIKKTTGASSVMVARGALWNAS 497
            V DRP+DPA+W+EIAD+V+ALSIPV+ANGDVFEY+D +RIK  TGASSVMVARGALWNAS
Sbjct: 181  VPDRPRDPAKWNEIADVVSALSIPVIANGDVFEYDDFERIKSATGASSVMVARGALWNAS 240

Query: 496  IFSPTEKLPWEDLKIEYVRKSILWDNDVRSTKHTLREMIGHYMSLELSEGKALVKTETLA 317
            +FSP  K+ +E +K EY+RK ILWDND++STKHTL+EMI HY  LEL EGKA++K+E++A
Sbjct: 241  MFSPEGKVSYEAVKREYIRKCILWDNDLKSTKHTLKEMIMHYSCLELPEGKAVIKSESMA 300

Query: 316  DVAELYGEMKYYRAVK 269
            D+AELYG+ +YY+ VK
Sbjct: 301  DLAELYGQREYYQLVK 316