BLASTX nr result

ID: Coptis24_contig00007822 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00007822
         (504 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272404.2| PREDICTED: probable LRR receptor-like serine...   115   5e-24
emb|CBI39026.3| unnamed protein product [Vitis vinifera]              115   5e-24
emb|CAN73893.1| hypothetical protein VITISV_028202 [Vitis vinifera]   115   5e-24
ref|XP_002297945.1| predicted protein [Populus trichocarpa] gi|2...   112   4e-23
ref|XP_002303698.1| predicted protein [Populus trichocarpa] gi|2...   112   4e-23

>ref|XP_002272404.2| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At1g56130-like [Vitis vinifera]
          Length = 1037

 Score =  115 bits (287), Expect = 5e-24
 Identities = 58/92 (63%), Positives = 68/92 (73%)
 Frame = -2

Query: 278 KLDGNYLTGPLPAFLGNLTSLDLLSVAYNALSGTIPAEXXXXXXXXXXXXXSNNFSGPLP 99
           K+D NY TGPLP+F+GNL+ L LLS+A+NALSGTIP E             SNNFSG LP
Sbjct: 89  KIDQNYFTGPLPSFIGNLSKLQLLSLAHNALSGTIPMELGNLQELTVLSLSSNNFSGTLP 148

Query: 98  SELGSLVNLEEMYIDSAGVNGEIPSTFSNLVN 3
            ELG+LVNL E+YI+S GV GEIPSTF+NL N
Sbjct: 149 PELGNLVNLRELYINSLGVGGEIPSTFANLEN 180


>emb|CBI39026.3| unnamed protein product [Vitis vinifera]
          Length = 1037

 Score =  115 bits (287), Expect = 5e-24
 Identities = 58/92 (63%), Positives = 68/92 (73%)
 Frame = -2

Query: 278 KLDGNYLTGPLPAFLGNLTSLDLLSVAYNALSGTIPAEXXXXXXXXXXXXXSNNFSGPLP 99
           K+D NY TGPLP+F+GNL+ L LLS+A+NALSGTIP E             SNNFSG LP
Sbjct: 134 KIDQNYFTGPLPSFIGNLSKLQLLSLAHNALSGTIPMELGNLQELTVLSLSSNNFSGTLP 193

Query: 98  SELGSLVNLEEMYIDSAGVNGEIPSTFSNLVN 3
            ELG+LVNL E+YI+S GV GEIPSTF+NL N
Sbjct: 194 PELGNLVNLRELYINSLGVGGEIPSTFANLEN 225


>emb|CAN73893.1| hypothetical protein VITISV_028202 [Vitis vinifera]
          Length = 361

 Score =  115 bits (287), Expect = 5e-24
 Identities = 58/92 (63%), Positives = 68/92 (73%)
 Frame = -2

Query: 278 KLDGNYLTGPLPAFLGNLTSLDLLSVAYNALSGTIPAEXXXXXXXXXXXXXSNNFSGPLP 99
           K+D NY TGPLP+F+GNL+ L LLS+A+NALSGTIP E             SNNFSG LP
Sbjct: 136 KIDQNYFTGPLPSFIGNLSKLQLLSLAHNALSGTIPMELGNLQELTVLSLSSNNFSGTLP 195

Query: 98  SELGSLVNLEEMYIDSAGVNGEIPSTFSNLVN 3
            ELG+LVNL E+YI+S GV GEIPSTF+NL N
Sbjct: 196 PELGNLVNLRELYINSLGVGGEIPSTFANLEN 227


>ref|XP_002297945.1| predicted protein [Populus trichocarpa] gi|222845203|gb|EEE82750.1|
           predicted protein [Populus trichocarpa]
          Length = 1041

 Score =  112 bits (279), Expect = 4e-23
 Identities = 54/90 (60%), Positives = 64/90 (71%)
 Frame = -2

Query: 278 KLDGNYLTGPLPAFLGNLTSLDLLSVAYNALSGTIPAEXXXXXXXXXXXXXSNNFSGPLP 99
           K+D NY TGPLPAF+GNLT+L  LS+A+NA SGTIP E              NNFSG LP
Sbjct: 130 KIDQNYFTGPLPAFIGNLTALQSLSIAHNAFSGTIPTELGNLKELTLLSIGINNFSGTLP 189

Query: 98  SELGSLVNLEEMYIDSAGVNGEIPSTFSNL 9
            ELG LVNLE++Y++S G+ GEIPSTF NL
Sbjct: 190 PELGQLVNLEQLYVNSCGLGGEIPSTFVNL 219


>ref|XP_002303698.1| predicted protein [Populus trichocarpa] gi|222841130|gb|EEE78677.1|
           predicted protein [Populus trichocarpa]
          Length = 1016

 Score =  112 bits (279), Expect = 4e-23
 Identities = 55/90 (61%), Positives = 66/90 (73%)
 Frame = -2

Query: 278 KLDGNYLTGPLPAFLGNLTSLDLLSVAYNALSGTIPAEXXXXXXXXXXXXXSNNFSGPLP 99
           K+D NY TGPLPAF+GNL++L  LS+A+NA SGTIP E              NNFSG LP
Sbjct: 102 KIDQNYFTGPLPAFIGNLSALKGLSIAHNAFSGTIPKELGNLKELTLLSFGVNNFSGTLP 161

Query: 98  SELGSLVNLEEMYIDSAGVNGEIPSTFSNL 9
            ELG+LVNLEE+YI+S G+ GEIPSTF+NL
Sbjct: 162 PELGNLVNLEELYINSCGLGGEIPSTFANL 191


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