BLASTX nr result

ID: Coptis24_contig00007817 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00007817
         (1107 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003568893.1| PREDICTED: nifU-like protein 4, mitochondria...   379   e-103
dbj|BAJ94768.1| predicted protein [Hordeum vulgare subsp. vulgar...   377   e-102
gb|EAY96612.1| hypothetical protein OsI_18522 [Oryza sativa Indi...   376   e-102
ref|NP_001054690.1| Os05g0155300 [Oryza sativa Japonica Group] g...   375   e-101
ref|XP_002439319.1| hypothetical protein SORBIDRAFT_09g004310 [S...   371   e-100

>ref|XP_003568893.1| PREDICTED: nifU-like protein 4, mitochondrial-like [Brachypodium
           distachyon]
          Length = 268

 Score =  379 bits (972), Expect = e-103
 Identities = 183/220 (83%), Positives = 201/220 (91%)
 Frame = -1

Query: 933 LQNKNTFAPWGGFGGQKRSMFIQTQSTPNPSSLMFHPGKPVMEVGSSDFPNARSAMTSPL 754
           L+N    +PW   GGQ+R+MFIQTQSTPNP SLMFHPGKPVMEVGSSDFPN R+AMTSPL
Sbjct: 49  LRNPAPPSPWDRLGGQRRTMFIQTQSTPNPQSLMFHPGKPVMEVGSSDFPNVRTAMTSPL 108

Query: 753 AKVLFAIDGVTRVFFGSDFVTVTKSDESSWDLLKPEIFGAIMDFYTSGQPLFLDSNAAAS 574
           AK LFAIDGVTRVFFGSDFVTVTKSDE+SWD LKPEIF AIMDFY+SGQPLFLDSN AA+
Sbjct: 109 AKALFAIDGVTRVFFGSDFVTVTKSDETSWDYLKPEIFAAIMDFYSSGQPLFLDSNTAAA 168

Query: 573 MDTAIHEDDSEIVAMIKELLETRIRPAVQDDGGDIEYRGFDPDSGVVKLKMQGACSGCPS 394
           MDTAIHEDDSEIVAMIKELLETRIRPAVQDDGGDIEYRGFDP++G+VKLKMQGACSGCPS
Sbjct: 169 MDTAIHEDDSEIVAMIKELLETRIRPAVQDDGGDIEYRGFDPETGIVKLKMQGACSGCPS 228

Query: 393 SSVTLKSGIENMLMHYVPEVRAVEQDLDDEEDETISSQME 274
           SSVTLKSGIENMLMHYVPEV+ VEQ+ D +E+  ++ Q+E
Sbjct: 229 SSVTLKSGIENMLMHYVPEVKGVEQEFDGDEEAELAGQVE 268


>dbj|BAJ94768.1| predicted protein [Hordeum vulgare subsp. vulgare]
           gi|326521670|dbj|BAK00411.1| predicted protein [Hordeum
           vulgare subsp. vulgare]
          Length = 268

 Score =  377 bits (968), Expect = e-102
 Identities = 180/213 (84%), Positives = 199/213 (93%)
 Frame = -1

Query: 912 APWGGFGGQKRSMFIQTQSTPNPSSLMFHPGKPVMEVGSSDFPNARSAMTSPLAKVLFAI 733
           +PW   GGQKR+MFIQTQSTPNP SLMFHPGKPVM+VGSSDFPNAR+AMTSPLAK LFAI
Sbjct: 56  SPWDRLGGQKRTMFIQTQSTPNPQSLMFHPGKPVMDVGSSDFPNARTAMTSPLAKALFAI 115

Query: 732 DGVTRVFFGSDFVTVTKSDESSWDLLKPEIFGAIMDFYTSGQPLFLDSNAAASMDTAIHE 553
           +GVTRVFFGSDFVTVTKSDE+SWD LKPE+F AIMDFY+SGQPLFLDSN AA+MDTAIHE
Sbjct: 116 EGVTRVFFGSDFVTVTKSDETSWDYLKPEVFAAIMDFYSSGQPLFLDSNTAAAMDTAIHE 175

Query: 552 DDSEIVAMIKELLETRIRPAVQDDGGDIEYRGFDPDSGVVKLKMQGACSGCPSSSVTLKS 373
           DDSEIVAMIKELLETRIRPAVQDDGGDIEYRGF+P++G+VKLKMQGACSGCPSSSVTLKS
Sbjct: 176 DDSEIVAMIKELLETRIRPAVQDDGGDIEYRGFEPETGIVKLKMQGACSGCPSSSVTLKS 235

Query: 372 GIENMLMHYVPEVRAVEQDLDDEEDETISSQME 274
           GIENMLMHYVPEV+ VEQ+ D +E+  ++ QME
Sbjct: 236 GIENMLMHYVPEVKGVEQEFDGDEEAELAGQME 268


>gb|EAY96612.1| hypothetical protein OsI_18522 [Oryza sativa Indica Group]
          Length = 272

 Score =  376 bits (966), Expect = e-102
 Identities = 181/213 (84%), Positives = 199/213 (93%)
 Frame = -1

Query: 912 APWGGFGGQKRSMFIQTQSTPNPSSLMFHPGKPVMEVGSSDFPNARSAMTSPLAKVLFAI 733
           +PW  FGGQKR MFIQTQSTPNP SLMF+PGKPVMEVGSSDFPNAR+AMTSPLAK LFAI
Sbjct: 60  SPWSRFGGQKRGMFIQTQSTPNPQSLMFYPGKPVMEVGSSDFPNARTAMTSPLAKALFAI 119

Query: 732 DGVTRVFFGSDFVTVTKSDESSWDLLKPEIFGAIMDFYTSGQPLFLDSNAAASMDTAIHE 553
           DGVTRVFFGSDFVTVTKS+E+SWD LKPE+F AIMDFY+SGQ LFLDS+ AASMDTAIHE
Sbjct: 120 DGVTRVFFGSDFVTVTKSEETSWDYLKPEVFAAIMDFYSSGQSLFLDSSTAASMDTAIHE 179

Query: 552 DDSEIVAMIKELLETRIRPAVQDDGGDIEYRGFDPDSGVVKLKMQGACSGCPSSSVTLKS 373
           DDSEIVAMIKELLETRIRPAVQDDGGDIEYRGFDP++G+VKLKMQGACSGCPSSSVTLKS
Sbjct: 180 DDSEIVAMIKELLETRIRPAVQDDGGDIEYRGFDPETGIVKLKMQGACSGCPSSSVTLKS 239

Query: 372 GIENMLMHYVPEVRAVEQDLDDEEDETISSQME 274
           GIENMLMHYVPEV+ VEQ+LD +E+  ++ Q+E
Sbjct: 240 GIENMLMHYVPEVKGVEQELDGDEEAELTGQLE 272


>ref|NP_001054690.1| Os05g0155300 [Oryza sativa Japonica Group]
           gi|54291852|gb|AAV32220.1| unknown protein [Oryza sativa
           Japonica Group] gi|113578241|dbj|BAF16604.1|
           Os05g0155300 [Oryza sativa Japonica Group]
           gi|215697325|dbj|BAG91319.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|222630253|gb|EEE62385.1| hypothetical protein
           OsJ_17174 [Oryza sativa Japonica Group]
          Length = 272

 Score =  375 bits (962), Expect = e-101
 Identities = 180/213 (84%), Positives = 198/213 (92%)
 Frame = -1

Query: 912 APWGGFGGQKRSMFIQTQSTPNPSSLMFHPGKPVMEVGSSDFPNARSAMTSPLAKVLFAI 733
           +PW  FGGQKR MFIQTQSTPNP SLMF+PGKPVMEVGSSDFPNAR+AMTSPLAK LFAI
Sbjct: 60  SPWSRFGGQKRGMFIQTQSTPNPQSLMFYPGKPVMEVGSSDFPNARTAMTSPLAKALFAI 119

Query: 732 DGVTRVFFGSDFVTVTKSDESSWDLLKPEIFGAIMDFYTSGQPLFLDSNAAASMDTAIHE 553
           DGVTRVFFGSDFVTVTKS+E+SWD LKPE+F  IMDFY+SGQ LFLDS+ AASMDTAIHE
Sbjct: 120 DGVTRVFFGSDFVTVTKSEETSWDYLKPEVFAVIMDFYSSGQSLFLDSSTAASMDTAIHE 179

Query: 552 DDSEIVAMIKELLETRIRPAVQDDGGDIEYRGFDPDSGVVKLKMQGACSGCPSSSVTLKS 373
           DDSEIVAMIKELLETRIRPAVQDDGGDIEYRGFDP++G+VKLKMQGACSGCPSSSVTLKS
Sbjct: 180 DDSEIVAMIKELLETRIRPAVQDDGGDIEYRGFDPETGIVKLKMQGACSGCPSSSVTLKS 239

Query: 372 GIENMLMHYVPEVRAVEQDLDDEEDETISSQME 274
           GIENMLMHYVPEV+ VEQ+LD +E+  ++ Q+E
Sbjct: 240 GIENMLMHYVPEVKGVEQELDGDEEAELTGQLE 272


>ref|XP_002439319.1| hypothetical protein SORBIDRAFT_09g004310 [Sorghum bicolor]
           gi|241944604|gb|EES17749.1| hypothetical protein
           SORBIDRAFT_09g004310 [Sorghum bicolor]
          Length = 268

 Score =  371 bits (953), Expect = e-100
 Identities = 180/209 (86%), Positives = 197/209 (94%), Gaps = 1/209 (0%)
 Frame = -1

Query: 909 PWGGFGG-QKRSMFIQTQSTPNPSSLMFHPGKPVMEVGSSDFPNARSAMTSPLAKVLFAI 733
           PW  FGG QKR+MFIQTQSTPNP SLMF+PGKPVMEVGSSDFPNAR+AMTSPLAK LFAI
Sbjct: 59  PWDRFGGGQKRTMFIQTQSTPNPQSLMFYPGKPVMEVGSSDFPNARTAMTSPLAKALFAI 118

Query: 732 DGVTRVFFGSDFVTVTKSDESSWDLLKPEIFGAIMDFYTSGQPLFLDSNAAASMDTAIHE 553
           DGVTR+FFGSDFVTVTKS+E+SWD LKPE+F AIMDFY+SGQPLFLDSNAAASMDTAIHE
Sbjct: 119 DGVTRIFFGSDFVTVTKSEETSWDYLKPEVFAAIMDFYSSGQPLFLDSNAAASMDTAIHE 178

Query: 552 DDSEIVAMIKELLETRIRPAVQDDGGDIEYRGFDPDSGVVKLKMQGACSGCPSSSVTLKS 373
           DDSEIVAMIKELLETRIRPAVQDDGGDIEYRGFDP++G+VKLKMQGACSGCPSSSVTLKS
Sbjct: 179 DDSEIVAMIKELLETRIRPAVQDDGGDIEYRGFDPENGIVKLKMQGACSGCPSSSVTLKS 238

Query: 372 GIENMLMHYVPEVRAVEQDLDDEEDETIS 286
           GIENMLMHYVPEV+ VEQ+ D +E+  ++
Sbjct: 239 GIENMLMHYVPEVKGVEQEFDGDEEAELA 267


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