BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00007808
         (214 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28363.3| unnamed protein product [Vitis vinifera]               80   2e-13
ref|XP_002269762.1| PREDICTED: pentatricopeptide repeat-containi...    80   2e-13
ref|XP_003575063.1| PREDICTED: pentatricopeptide repeat-containi...    71   8e-11
gb|EEC74826.1| hypothetical protein OsI_10663 [Oryza sativa Indi...    67   1e-09
ref|NP_001049485.1| Os03g0235200 [Oryza sativa Japonica Group] g...    67   1e-09

>emb|CBI28363.3| unnamed protein product [Vitis vinifera]
          Length = 930

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 38/70 (54%), Positives = 48/70 (68%)
 Frame = +2

Query: 5   DSVRVFNGIARPDLVSWSSLISGFVENGQEEEGLRLFVEMVQSGIRPDVTVSSMVIGASA 184
           D+  VF GI +PDLV WSS++SG+V+NG EEEGLR+F +MV  GI PD    SMV+GA  
Sbjct: 174 DAAVVFGGIDKPDLVGWSSILSGYVKNGLEEEGLRIFCDMVSGGIEPDAFAFSMVLGACT 233

Query: 185 KLGSFGAGIQ 214
            L  +  G Q
Sbjct: 234 NLECWDFGTQ 243


>ref|XP_002269762.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Vitis vinifera]
          Length = 906

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 38/70 (54%), Positives = 48/70 (68%)
 Frame = +2

Query: 5   DSVRVFNGIARPDLVSWSSLISGFVENGQEEEGLRLFVEMVQSGIRPDVTVSSMVIGASA 184
           D+  VF GI +PDLV WSS++SG+V+NG EEEGLR+F +MV  GI PD    SMV+GA  
Sbjct: 115 DAAVVFGGIDKPDLVGWSSILSGYVKNGLEEEGLRIFCDMVSGGIEPDAFAFSMVLGACT 174

Query: 185 KLGSFGAGIQ 214
            L  +  G Q
Sbjct: 175 NLECWDFGTQ 184


>ref|XP_003575063.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g39530-like [Brachypodium distachyon]
          Length = 789

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 34/67 (50%), Positives = 46/67 (68%)
 Frame = +2

Query: 14  RVFNGIARPDLVSWSSLISGFVENGQEEEGLRLFVEMVQSGIRPDVTVSSMVIGASAKLG 193
           +VFNGIA PDLVSW+S++SG+ ENG   E + LFVEMV +GIR D    S+ + A++ L 
Sbjct: 163 KVFNGIATPDLVSWTSMLSGYTENGCHAEAVMLFVEMVHAGIRCDAFTLSVALRAASSLA 222

Query: 194 SFGAGIQ 214
           +   G Q
Sbjct: 223 NLSLGHQ 229


>gb|EEC74826.1| hypothetical protein OsI_10663 [Oryza sativa Indica Group]
          Length = 703

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 32/69 (46%), Positives = 46/69 (66%)
 Frame = +2

Query: 8   SVRVFNGIARPDLVSWSSLISGFVENGQEEEGLRLFVEMVQSGIRPDVTVSSMVIGASAK 187
           +VRVF  +A+PDLVSW+++ISG+ +NGQ EE LR F   ++SGI+PD      V+ A A 
Sbjct: 323 AVRVFEAMAKPDLVSWTAVISGYAQNGQPEEALRYFDMFLRSGIKPDHVTFVGVLSACAH 382

Query: 188 LGSFGAGIQ 214
            G    G++
Sbjct: 383 AGLVDKGLE 391


>ref|NP_001049485.1| Os03g0235200 [Oryza sativa Japonica Group]
           gi|108707037|gb|ABF94832.1| pentatricopeptide, putative,
           expressed [Oryza sativa Japonica Group]
           gi|113547956|dbj|BAF11399.1| Os03g0235200 [Oryza sativa
           Japonica Group] gi|125585525|gb|EAZ26189.1| hypothetical
           protein OsJ_10058 [Oryza sativa Japonica Group]
           gi|215706461|dbj|BAG93317.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 641

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 32/69 (46%), Positives = 46/69 (66%)
 Frame = +2

Query: 8   SVRVFNGIARPDLVSWSSLISGFVENGQEEEGLRLFVEMVQSGIRPDVTVSSMVIGASAK 187
           +VRVF  +A+PDLVSW+++ISG+ +NGQ EE LR F   ++SGI+PD      V+ A A 
Sbjct: 323 AVRVFEAMAKPDLVSWTAVISGYAQNGQPEEALRYFDMFLRSGIKPDHVTFVGVLSACAH 382

Query: 188 LGSFGAGIQ 214
            G    G++
Sbjct: 383 AGLVDKGLE 391