BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00007785
         (619 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002460365.1| hypothetical protein SORBIDRAFT_02g027020 [S...    60   1e-07
emb|CAN88854.1| D2/4-type cyclin [Populus trichocarpa]                 57   2e-07
gb|AEV41134.1| D2/4-type cyclin [Populus x canadensis]                 57   2e-07
gb|AAV28532.1| D-type cyclin [Saccharum hybrid cultivar ROC16]         60   2e-07
ref|XP_002306546.1| predicted protein [Populus trichocarpa] gi|2...    56   3e-07

>ref|XP_002460365.1| hypothetical protein SORBIDRAFT_02g027020 [Sorghum bicolor]
           gi|241923742|gb|EER96886.1| hypothetical protein
           SORBIDRAFT_02g027020 [Sorghum bicolor]
          Length = 378

 Score = 59.7 bits (143), Expect(2) = 1e-07
 Identities = 27/35 (77%), Positives = 30/35 (85%)
 Frame = +3

Query: 180 ELPSGRAWVVQLLAVACLSLAVKMEETVVPPSLDL 284
           +LP G+AW  QLL+VACLSLA KMEET VPPSLDL
Sbjct: 127 QLPEGKAWTTQLLSVACLSLAAKMEETYVPPSLDL 161



 Score = 21.6 bits (44), Expect(2) = 1e-07
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = +2

Query: 269 SISRFVGEPASFVFEVRTLQLME 337
           S+   VG+ A +VFE +T+Q ME
Sbjct: 158 SLDLQVGD-ARYVFEAKTIQRME 179


>emb|CAN88854.1| D2/4-type cyclin [Populus trichocarpa]
          Length = 361

 Score = 57.0 bits (136), Expect(2) = 2e-07
 Identities = 27/35 (77%), Positives = 31/35 (88%)
 Frame = +3

Query: 180 ELPSGRAWVVQLLAVACLSLAVKMEETVVPPSLDL 284
           ELP+G+ W++QLLAVACLSLA KMEET VP SLDL
Sbjct: 144 ELPNGKPWMMQLLAVACLSLAAKMEETEVPLSLDL 178



 Score = 23.9 bits (50), Expect(2) = 2e-07
 Identities = 13/23 (56%), Positives = 16/23 (69%)
 Frame = +2

Query: 269 SISRFVGEPASFVFEVRTLQLME 337
           S+   VGE + FVFE RT+Q ME
Sbjct: 175 SLDLQVGE-SRFVFEARTIQRME 196


>gb|AEV41134.1| D2/4-type cyclin [Populus x canadensis]
          Length = 353

 Score = 57.0 bits (136), Expect(2) = 2e-07
 Identities = 27/35 (77%), Positives = 31/35 (88%)
 Frame = +3

Query: 180 ELPSGRAWVVQLLAVACLSLAVKMEETVVPPSLDL 284
           ELP+G+ W++QLLAVACLSLA KMEET VP SLDL
Sbjct: 132 ELPNGKPWMMQLLAVACLSLAAKMEETEVPLSLDL 166



 Score = 23.9 bits (50), Expect(2) = 2e-07
 Identities = 13/23 (56%), Positives = 16/23 (69%)
 Frame = +2

Query: 269 SISRFVGEPASFVFEVRTLQLME 337
           S+   VGE + FVFE RT+Q ME
Sbjct: 163 SLDLQVGE-SRFVFEARTIQRME 184


>gb|AAV28532.1| D-type cyclin [Saccharum hybrid cultivar ROC16]
          Length = 343

 Score = 59.7 bits (143), Expect(2) = 2e-07
 Identities = 27/35 (77%), Positives = 30/35 (85%)
 Frame = +3

Query: 180 ELPSGRAWVVQLLAVACLSLAVKMEETVVPPSLDL 284
           +LP G+AW  QLL+VACLSLA KMEET VPPSLDL
Sbjct: 124 QLPEGKAWTTQLLSVACLSLAAKMEETYVPPSLDL 158



 Score = 21.2 bits (43), Expect(2) = 2e-07
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +2

Query: 296 ASFVFEVRTLQLME 337
           A +VFE +T+Q ME
Sbjct: 163 ARYVFEAKTIQRME 176


>ref|XP_002306546.1| predicted protein [Populus trichocarpa] gi|222855995|gb|EEE93542.1|
           predicted protein [Populus trichocarpa]
          Length = 337

 Score = 56.2 bits (134), Expect(2) = 3e-07
 Identities = 27/35 (77%), Positives = 29/35 (82%)
 Frame = +3

Query: 180 ELPSGRAWVVQLLAVACLSLAVKMEETVVPPSLDL 284
           ELP G AW++QLL VACLSLA KMEET VP SLDL
Sbjct: 129 ELPKGNAWMMQLLGVACLSLAAKMEETEVPLSLDL 163



 Score = 23.9 bits (50), Expect(2) = 3e-07
 Identities = 13/23 (56%), Positives = 16/23 (69%)
 Frame = +2

Query: 269 SISRFVGEPASFVFEVRTLQLME 337
           S+   VGE + FVFE RT+Q ME
Sbjct: 160 SLDLQVGE-SRFVFEARTIQRME 181