BLASTX nr result

ID: Coptis24_contig00007783 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00007783
         (368 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275846.1| PREDICTED: transcription factor GAMYB [Vitis...   161   6e-38
ref|XP_002304822.1| predicted protein [Populus trichocarpa] gi|2...   156   2e-36
ref|XP_002525574.1| r2r3-myb transcription factor, putative [Ric...   149   2e-34
gb|AEH05965.1| GAMYB1 protein [Glycine max]                           148   4e-34
ref|XP_003541563.1| PREDICTED: transcription factor GAMYB-like [...   146   1e-33

>ref|XP_002275846.1| PREDICTED: transcription factor GAMYB [Vitis vinifera]
           gi|298205121|emb|CBI40642.3| unnamed protein product
           [Vitis vinifera]
          Length = 559

 Score =  161 bits (407), Expect = 6e-38
 Identities = 78/123 (63%), Positives = 91/123 (73%), Gaps = 1/123 (0%)
 Frame = +2

Query: 2   AKLGNKWARMAAHLPGRTDNEIKNYWNTRIKRRQRAGLPLYPPDVCLQQVLNENQQARNT 181
           AK+GNKWARMAAHLPGRTDNEIKNYWNTRIKRRQRAGLPLYPP+VC  Q L E+QQ +NT
Sbjct: 109 AKMGNKWARMAAHLPGRTDNEIKNYWNTRIKRRQRAGLPLYPPEVCF-QALQESQQIQNT 167

Query: 182 NEFNSGDSPHH-IMQASNYDIPDVIFDHLKSHQGLLAYAPPLPDLSIGSTLNQSLGSSQN 358
              N GD  HH ++Q ++Y+IPDVI D  K++Q    Y P  P+LS  S L +  GSSQ 
Sbjct: 168 GGINGGDKVHHDLLQTNSYEIPDVILDGFKANQDAFPYVPDFPNLSTSSMLMKGFGSSQY 227

Query: 359 YSF 367
             F
Sbjct: 228 CGF 230


>ref|XP_002304822.1| predicted protein [Populus trichocarpa] gi|222842254|gb|EEE79801.1|
           predicted protein [Populus trichocarpa]
          Length = 558

 Score =  156 bits (394), Expect = 2e-36
 Identities = 79/123 (64%), Positives = 94/123 (76%), Gaps = 1/123 (0%)
 Frame = +2

Query: 2   AKLGNKWARMAAHLPGRTDNEIKNYWNTRIKRRQRAGLPLYPPDVCLQQVLNENQQARNT 181
           AK+GNKWARMAAHLPGRTDNEIKNYWNTRIKRRQRAGLPLYPP+V L Q L  +QQ  + 
Sbjct: 108 AKMGNKWARMAAHLPGRTDNEIKNYWNTRIKRRQRAGLPLYPPEVSL-QTLQGSQQCLDI 166

Query: 182 NEFNSGD-SPHHIMQASNYDIPDVIFDHLKSHQGLLAYAPPLPDLSIGSTLNQSLGSSQN 358
           N  +SG+   H I+Q  NY IPDV+FD+LK+++ +L Y P LPD+S  S L + L SSQ 
Sbjct: 167 NGMDSGNKGQHDILQTHNYGIPDVMFDNLKTNRSILPYVPELPDISASSILMKGLCSSQY 226

Query: 359 YSF 367
            SF
Sbjct: 227 GSF 229


>ref|XP_002525574.1| r2r3-myb transcription factor, putative [Ricinus communis]
           gi|223535153|gb|EEF36833.1| r2r3-myb transcription
           factor, putative [Ricinus communis]
          Length = 556

 Score =  149 bits (376), Expect = 2e-34
 Identities = 75/123 (60%), Positives = 89/123 (72%), Gaps = 1/123 (0%)
 Frame = +2

Query: 2   AKLGNKWARMAAHLPGRTDNEIKNYWNTRIKRRQRAGLPLYPPDVCLQQVLNENQQARNT 181
           AK+GNKWARMAAHLPGRTDNEIKNYWNTRIKRRQRAGLPLYPP+V   Q L E+ Q    
Sbjct: 109 AKMGNKWARMAAHLPGRTDNEIKNYWNTRIKRRQRAGLPLYPPEVSF-QALQESHQGLTI 167

Query: 182 NEFNSGDSPH-HIMQASNYDIPDVIFDHLKSHQGLLAYAPPLPDLSIGSTLNQSLGSSQN 358
              N+GD  H  +++ + Y+IPDVIFD LK+ QG+  Y P L D++  S L + L SSQ 
Sbjct: 168 GGINTGDKVHGDLLRNNGYEIPDVIFDSLKASQGISPYVPELADITTSSMLIKGLSSSQY 227

Query: 359 YSF 367
            SF
Sbjct: 228 GSF 230


>gb|AEH05965.1| GAMYB1 protein [Glycine max]
          Length = 536

 Score =  148 bits (374), Expect = 4e-34
 Identities = 75/123 (60%), Positives = 90/123 (73%), Gaps = 1/123 (0%)
 Frame = +2

Query: 2   AKLGNKWARMAAHLPGRTDNEIKNYWNTRIKRRQRAGLPLYPPDVCLQQVLNENQQARNT 181
           AK+GNKWARMAAHLPGRTDNEIKNYWNTRIKRRQRAGLPLYPP+V L Q L E+Q +++T
Sbjct: 106 AKMGNKWARMAAHLPGRTDNEIKNYWNTRIKRRQRAGLPLYPPEVSL-QALQESQHSQST 164

Query: 182 NEFNSGDSPH-HIMQASNYDIPDVIFDHLKSHQGLLAYAPPLPDLSIGSTLNQSLGSSQN 358
              N GD  H   +Q ++Y+I D IFD LK +QG+L Y   L D+S+     + L SSQ 
Sbjct: 165 GGLNGGDKMHPDFLQKNSYEIHDAIFDSLKDNQGILPYVHELSDISVYGNKLKGLDSSQY 224

Query: 359 YSF 367
            SF
Sbjct: 225 CSF 227


>ref|XP_003541563.1| PREDICTED: transcription factor GAMYB-like [Glycine max]
          Length = 595

 Score =  146 bits (369), Expect = 1e-33
 Identities = 74/123 (60%), Positives = 89/123 (72%), Gaps = 1/123 (0%)
 Frame = +2

Query: 2   AKLGNKWARMAAHLPGRTDNEIKNYWNTRIKRRQRAGLPLYPPDVCLQQVLNENQQARNT 181
           AK+GNKWARMAAHLPGRTDNEIKNYWNTRIKRRQRAGLPLYPP+V L   L E+Q +++T
Sbjct: 165 AKMGNKWARMAAHLPGRTDNEIKNYWNTRIKRRQRAGLPLYPPEVSL-HALQESQHSQST 223

Query: 182 NEFNSGDSPH-HIMQASNYDIPDVIFDHLKSHQGLLAYAPPLPDLSIGSTLNQSLGSSQN 358
              N GD  H   +Q ++Y+I D IFD LK +QG+L Y   L D+S+     + L SSQ 
Sbjct: 224 GGLNGGDKMHPDFLQKNSYEIHDAIFDSLKDNQGILPYVHELSDISVYGNKLKGLDSSQY 283

Query: 359 YSF 367
            SF
Sbjct: 284 CSF 286


Top