BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00007782
         (3796 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277942.2| PREDICTED: pentatricopeptide repeat-containi...   228   7e-57
ref|XP_002330195.1| predicted protein [Populus trichocarpa] gi|2...   215   6e-53
ref|XP_004144813.1| PREDICTED: pentatricopeptide repeat-containi...   211   2e-51
ref|XP_002512435.1| pentatricopeptide repeat-containing protein,...   209   5e-51
ref|XP_003537787.1| PREDICTED: pentatricopeptide repeat-containi...   208   8e-51

>ref|XP_002277942.2| PREDICTED: pentatricopeptide repeat-containing protein At1g09820-like
            [Vitis vinifera]
          Length = 609

 Score =  228 bits (582), Expect = 7e-57
 Identities = 106/153 (69%), Positives = 131/153 (85%)
 Frame = -1

Query: 3796 REGNREGASKLLDKMKDKGVRPDLITYNILIGALCRKGESRKAVKLLNEMLEMGLSPSHL 3617
            REGN + A KL  +M+  G++ DL+TYNIL+ ALC+KGE+RKAV+LL+EM E+GL+PSHL
Sbjct: 451  REGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNPSHL 510

Query: 3616 TYNTLIDGFCGEGNLATALNTRTRMEREGKRANIVTYNVLIKGLCQKGRMEEANGLLNEM 3437
            TYN LIDG+  EGN   ALN RT ME++G+RANIVTYNVLIKG C KG++EEAN LLNEM
Sbjct: 511  TYNALIDGYFREGNSTAALNVRTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEM 570

Query: 3436 LEKGLVPNRITYDVIRDEMVERGFVPDIDGHLY 3338
            LEKGL+PNR TYD++RDEM+E+GF+PDIDGHLY
Sbjct: 571  LEKGLIPNRTTYDILRDEMMEKGFIPDIDGHLY 603



 Score =  114 bits (284), Expect = 3e-22
 Identities = 55/133 (41%), Positives = 82/133 (61%)
 Frame = -1

Query: 3790 GNREGASKLLDKMKDKGVRPDLITYNILIGALCRKGESRKAVKLLNEMLEMGLSPSHLTY 3611
            G  + A  +++ MK  G  P +ITYN +I   C+ G+  KA  LL EM+   + P+ +T+
Sbjct: 243  GKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITF 302

Query: 3610 NTLIDGFCGEGNLATALNTRTRMEREGKRANIVTYNVLIKGLCQKGRMEEANGLLNEMLE 3431
            N LIDGFC + N+  A      M+R+G + N+VTYN LI GLC  G+++EA GL ++M  
Sbjct: 303  NILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSG 362

Query: 3430 KGLVPNRITYDVI 3392
             GL PN +TY+ +
Sbjct: 363  MGLKPNVVTYNAL 375



 Score =  110 bits (275), Expect = 3e-21
 Identities = 57/147 (38%), Positives = 85/147 (57%)
 Frame = -1

Query: 3796 REGNREGASKLLDKMKDKGVRPDLITYNILIGALCRKGESRKAVKLLNEMLEMGLSPSHL 3617
            + G    A  LL +M  K + P+ IT+NILI   CR      A K+  EM   GL P+ +
Sbjct: 276  KAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVV 335

Query: 3616 TYNTLIDGFCGEGNLATALNTRTRMEREGKRANIVTYNVLIKGLCQKGRMEEANGLLNEM 3437
            TYN+LI+G C  G L  AL  + +M   G + N+VTYN LI G C+K  ++EA  +L+++
Sbjct: 336  TYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDI 395

Query: 3436 LEKGLVPNRITYDVIRDEMVERGFVPD 3356
             ++GL PN IT++ + D   + G + D
Sbjct: 396  GKRGLAPNVITFNTLIDAYGKAGRMDD 422



 Score =  108 bits (269), Expect = 1e-20
 Identities = 56/136 (41%), Positives = 82/136 (60%)
 Frame = -1

Query: 3775 ASKLLDKMKDKGVRPDLITYNILIGALCRKGESRKAVKLLNEMLEMGLSPSHLTYNTLID 3596
            A ++LD +  +G+ P++IT+N LI A  + G    A  L + ML+ G+ P+  TYN LI 
Sbjct: 388  AREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIV 447

Query: 3595 GFCGEGNLATALNTRTRMEREGKRANIVTYNVLIKGLCQKGRMEEANGLLNEMLEKGLVP 3416
            GFC EGN+  A      ME  G +A++VTYN+L+  LC+KG   +A  LL+EM E GL P
Sbjct: 448  GFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNP 507

Query: 3415 NRITYDVIRDEMVERG 3368
            + +TY+ + D     G
Sbjct: 508  SHLTYNALIDGYFREG 523



 Score = 98.2 bits (243), Expect = 1e-17
 Identities = 50/135 (37%), Positives = 83/135 (61%)
 Frame = -1

Query: 3796 REGNREGASKLLDKMKDKGVRPDLITYNILIGALCRKGESRKAVKLLNEMLEMGLSPSHL 3617
            R+ N   A K+ ++M+ +G++P+++TYN LI  LC  G+  +A+ L ++M  MGL P+ +
Sbjct: 311  RDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVV 370

Query: 3616 TYNTLIDGFCGEGNLATALNTRTRMEREGKRANIVTYNVLIKGLCQKGRMEEANGLLNEM 3437
            TYN LI+GFC +  L  A      + + G   N++T+N LI    + GRM++A  L + M
Sbjct: 371  TYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMM 430

Query: 3436 LEKGLVPNRITYDVI 3392
            L+ G+ PN  TY+ +
Sbjct: 431  LDTGVCPNVSTYNCL 445



 Score = 73.6 bits (179), Expect = 4e-10
 Identities = 38/137 (27%), Positives = 74/137 (54%)
 Frame = -1

Query: 3796 REGNREGASKLLDKMKDKGVRPDLITYNILIGALCRKGESRKAVKLLNEMLEMGLSPSHL 3617
            + G  + A +  D+  D G R   ++ N ++ +L ++G       +  EM+   +  + +
Sbjct: 171  KNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVV 230

Query: 3616 TYNTLIDGFCGEGNLATALNTRTRMEREGKRANIVTYNVLIKGLCQKGRMEEANGLLNEM 3437
            T++ +I+G C  G    A +    M+  G   +++TYN +I G C+ G+M +A+ LL EM
Sbjct: 231  TFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEM 290

Query: 3436 LEKGLVPNRITYDVIRD 3386
            + K + PN IT++++ D
Sbjct: 291  VAKRIHPNEITFNILID 307


>ref|XP_002330195.1| predicted protein [Populus trichocarpa] gi|222871651|gb|EEF08782.1|
            predicted protein [Populus trichocarpa]
          Length = 529

 Score =  215 bits (548), Expect = 6e-53
 Identities = 100/150 (66%), Positives = 130/150 (86%)
 Frame = -1

Query: 3796 REGNREGASKLLDKMKDKGVRPDLITYNILIGALCRKGESRKAVKLLNEMLEMGLSPSHL 3617
            R+G+ + A  L+++M  K +  D++TYNILI +LC+KGESRKAVKLL+EM E GL+PSH+
Sbjct: 380  RKGDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHV 439

Query: 3616 TYNTLIDGFCGEGNLATALNTRTRMEREGKRANIVTYNVLIKGLCQKGRMEEANGLLNEM 3437
            TYNTL+DG+C EGNL  AL  RTRMER+GK+AN+VT+NVLIKG C KGR+E+ANGLLNEM
Sbjct: 440  TYNTLMDGYCREGNLRAALIVRTRMERKGKQANVVTHNVLIKGFCLKGRLEDANGLLNEM 499

Query: 3436 LEKGLVPNRITYDVIRDEMVERGFVPDIDG 3347
            LE+GLVPNR TY++I++EM+E+GFVPDI+G
Sbjct: 500  LERGLVPNRTTYEIIKEEMMEKGFVPDIEG 529



 Score =  110 bits (276), Expect = 2e-21
 Identities = 54/145 (37%), Positives = 89/145 (61%)
 Frame = -1

Query: 3796 REGNREGASKLLDKMKDKGVRPDLITYNILIGALCRKGESRKAVKLLNEMLEMGLSPSHL 3617
            ++ N  GA ++  +M+ +G+RP+++TYNILI  LC  G+  +AV L ++M+   L P+ +
Sbjct: 240  KDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVV 299

Query: 3616 TYNTLIDGFCGEGNLATALNTRTRMEREGKRANIVTYNVLIKGLCQKGRMEEANGLLNEM 3437
            T+N LI+GFC    +  A+N    ME++G   N +TY  LI   C+ GRME+A  L N M
Sbjct: 300  THNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMM 359

Query: 3436 LEKGLVPNRITYDVIRDEMVERGFV 3362
            +++G+ P   TY+ +   +  +G V
Sbjct: 360  IDRGIFPEVSTYNCLIAGLCRKGDV 384



 Score =  106 bits (264), Expect = 6e-20
 Identities = 54/136 (39%), Positives = 78/136 (57%)
 Frame = -1

Query: 3775 ASKLLDKMKDKGVRPDLITYNILIGALCRKGESRKAVKLLNEMLEMGLSPSHLTYNTLID 3596
            A  L + M+ +GV P+ +TY  LI A C+ G    A  L N M++ G+ P   TYN LI 
Sbjct: 317  AINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIA 376

Query: 3595 GFCGEGNLATALNTRTRMEREGKRANIVTYNVLIKGLCQKGRMEEANGLLNEMLEKGLVP 3416
            G C +G++  A +    M  +   A++VTYN+LI  LC+KG   +A  LL+EM EKGL P
Sbjct: 377  GLCRKGDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNP 436

Query: 3415 NRITYDVIRDEMVERG 3368
            + +TY+ + D     G
Sbjct: 437  SHVTYNTLMDGYCREG 452



 Score =  105 bits (262), Expect = 9e-20
 Identities = 49/142 (34%), Positives = 83/142 (58%)
 Frame = -1

Query: 3793 EGNREGASKLLDKMKDKGVRPDLITYNILIGALCRKGESRKAVKLLNEMLEMGLSPSHLT 3614
            +G  + A  L D+M    + P+++T+N+LI   C+     +A+ L N+M + G+ P+ +T
Sbjct: 276  DGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMT 335

Query: 3613 YNTLIDGFCGEGNLATALNTRTRMEREGKRANIVTYNVLIKGLCQKGRMEEANGLLNEML 3434
            Y TLID +C +G +  A      M   G    + TYN LI GLC+KG ++ A  L+NEM+
Sbjct: 336  YTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMV 395

Query: 3433 EKGLVPNRITYDVIRDEMVERG 3368
             K L  + +TY+++ D + ++G
Sbjct: 396  SKKLSADVVTYNILIDSLCKKG 417



 Score =  104 bits (259), Expect = 2e-19
 Identities = 54/147 (36%), Positives = 82/147 (55%)
 Frame = -1

Query: 3796 REGNREGASKLLDKMKDKGVRPDLITYNILIGALCRKGESRKAVKLLNEMLEMGLSPSHL 3617
            R G    A  +L +M  KG+ P+ +TYNILI   C+      A+++  EM   GL P+ +
Sbjct: 205  RIGKMYKADAILKEMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVV 264

Query: 3616 TYNTLIDGFCGEGNLATALNTRTRMEREGKRANIVTYNVLIKGLCQKGRMEEANGLLNEM 3437
            TYN LI+G C +G +  A+  R +M       N+VT+NVLI G C+   + EA  L N+M
Sbjct: 265  TYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDM 324

Query: 3436 LEKGLVPNRITYDVIRDEMVERGFVPD 3356
             ++G+ PN +TY  + D   + G + D
Sbjct: 325  EKQGVDPNAMTYTTLIDAYCKDGRMED 351



 Score = 90.1 bits (222), Expect = 4e-15
 Identities = 48/160 (30%), Positives = 84/160 (52%), Gaps = 38/160 (23%)
 Frame = -1

Query: 3757 KMKDKGVRPDLITYNILIGALCRKGESRKAVKLLNEMLEMGLSPSHLTYNTLIDGFCGEG 3578
            +M  + +  ++I++NI++  LC+ G+  +A  ++ +M   G+SP+ +TYNTLIDG+C  G
Sbjct: 145  EMIKRKIELNVISFNIVVNGLCKVGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGYCKMG 204

Query: 3577 --------------------------------------NLATALNTRTRMEREGKRANIV 3512
                                                  N++ A+     M+R+G R N+V
Sbjct: 205  RIGKMYKADAILKEMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVV 264

Query: 3511 TYNVLIKGLCQKGRMEEANGLLNEMLEKGLVPNRITYDVI 3392
            TYN+LI GLC  G+++EA  L ++M+   L PN +T++V+
Sbjct: 265  TYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVL 304



 Score = 76.6 bits (187), Expect = 5e-11
 Identities = 40/124 (32%), Positives = 71/124 (57%), Gaps = 3/124 (2%)
 Frame = -1

Query: 3748 DKGVRPDLITYNILIGALCRKGESRKAVKLLNEMLEMGLSPSHLTYNTLIDGFCGEGNLA 3569
            D G +  LI+ N L+  L ++ E+     +  EM++  +  + +++N +++G C  G L 
Sbjct: 113  DYGFKLSLISCNPLLSGLVKESENGDMEFVYREMIKRKIELNVISFNIVVNGLCKVGKLN 172

Query: 3568 TALNTRTRMEREGKRANIVTYNVLIKGLCQKGR---MEEANGLLNEMLEKGLVPNRITYD 3398
             A +    M+  G   N++TYN LI G C+ GR   M +A+ +L EM+ KG+ PN +TY+
Sbjct: 173  RAGDVIEDMKVWGVSPNVITYNTLIDGYCKMGRIGKMYKADAILKEMVAKGICPNEVTYN 232

Query: 3397 VIRD 3386
            ++ D
Sbjct: 233  ILID 236


>ref|XP_004144813.1| PREDICTED: pentatricopeptide repeat-containing protein At1g09820-like
            [Cucumis sativus] gi|449524964|ref|XP_004169491.1|
            PREDICTED: pentatricopeptide repeat-containing protein
            At1g09820-like [Cucumis sativus]
          Length = 611

 Score =  211 bits (536), Expect = 2e-51
 Identities = 95/153 (62%), Positives = 127/153 (83%)
 Frame = -1

Query: 3796 REGNREGASKLLDKMKDKGVRPDLITYNILIGALCRKGESRKAVKLLNEMLEMGLSPSHL 3617
            REG  E    LL++M+ +GV+ D +TYNILI A C K E +KA +L++EML+ GL PSHL
Sbjct: 455  REGKMEEVKNLLNEMQCRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHL 514

Query: 3616 TYNTLIDGFCGEGNLATALNTRTRMEREGKRANIVTYNVLIKGLCQKGRMEEANGLLNEM 3437
            TYN L++G+C EGNL  ALN R +ME+EG+ AN+VTYNVLI+G C+KG++E+ANGLLNEM
Sbjct: 515  TYNILLNGYCMEGNLRAALNLRKQMEKEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEM 574

Query: 3436 LEKGLVPNRITYDVIRDEMVERGFVPDIDGHLY 3338
            LEKGL+PNR TY++I++EM+E+GF+PDI+GHLY
Sbjct: 575  LEKGLIPNRTTYEIIKEEMMEKGFLPDIEGHLY 607



 Score =  110 bits (275), Expect = 3e-21
 Identities = 52/135 (38%), Positives = 85/135 (62%)
 Frame = -1

Query: 3796 REGNREGASKLLDKMKDKGVRPDLITYNILIGALCRKGESRKAVKLLNEMLEMGLSPSHL 3617
            ++ N   A K+ ++M+ +G++P ++TYN L+  LC +G+  +A  LL+EML   L P+ +
Sbjct: 315  KDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVI 374

Query: 3616 TYNTLIDGFCGEGNLATALNTRTRMEREGKRANIVTYNVLIKGLCQKGRMEEANGLLNEM 3437
            TYN LI+G+C +  L  A      + ++G   N++T+N L+ G C+ G+MEEA  L   M
Sbjct: 375  TYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVM 434

Query: 3436 LEKGLVPNRITYDVI 3392
            LEKG +PN  TY+ +
Sbjct: 435  LEKGFLPNASTYNCL 449



 Score =  106 bits (264), Expect = 6e-20
 Identities = 52/130 (40%), Positives = 80/130 (61%)
 Frame = -1

Query: 3781 EGASKLLDKMKDKGVRPDLITYNILIGALCRKGESRKAVKLLNEMLEMGLSPSHLTYNTL 3602
            E A +L D +  +G+ P++IT+N L+   C+ G+  +A  L   MLE G  P+  TYN L
Sbjct: 390  EEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCL 449

Query: 3601 IDGFCGEGNLATALNTRTRMEREGKRANIVTYNVLIKGLCQKGRMEEANGLLNEMLEKGL 3422
            I GFC EG +    N    M+  G +A+ VTYN+LI   C+K   ++A  L++EML+KGL
Sbjct: 450  IVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGL 509

Query: 3421 VPNRITYDVI 3392
             P+ +TY+++
Sbjct: 510  KPSHLTYNIL 519



 Score =  103 bits (256), Expect = 5e-19
 Identities = 56/161 (34%), Positives = 89/161 (55%), Gaps = 16/161 (9%)
 Frame = -1

Query: 3793 EGNREGASKLLDKMKDKGVRPDLITYNILIGALCRKGESRKAVKLLNEMLEMGLSPSHLT 3614
            EG    A  LLD+M    ++P++ITYN LI   C+K    +A +L + + + GL+P+ +T
Sbjct: 351  EGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVIT 410

Query: 3613 YNTLIDGFCGEGNLATALNTRTRMEREGKRANIVTYNVLIKGLCQKGRMEEANGLLNEML 3434
            +NTL+ G+C  G +  A   +  M  +G   N  TYN LI G C++G+MEE   LLNEM 
Sbjct: 411  FNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQ 470

Query: 3433 EKGLVPNRITYDV----------------IRDEMVERGFVP 3359
             +G+  + +TY++                + DEM+++G  P
Sbjct: 471  CRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKP 511



 Score =  102 bits (253), Expect = 1e-18
 Identities = 54/163 (33%), Positives = 87/163 (53%), Gaps = 16/163 (9%)
 Frame = -1

Query: 3796 REGNREGASKLLDKMKDKGVRPDLITYNILIGALCRKGESRKAVKLLNEMLEMGLSPSHL 3617
            R G    A  +L +M +  V P+ +T+N+LI   C+      A+K+  EM   GL P+ +
Sbjct: 280  RVGKMYKADAILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVV 339

Query: 3616 TYNTLIDGFCGEGNLATALNTRTRMEREGKRANIVTYNVLIKGLCQKGRMEEANGLLNEM 3437
            TYN+L++G C EG L  A      M     + N++TYN LI G C+K  +EEA  L + +
Sbjct: 340  TYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNI 399

Query: 3436 LEKGLVPNRITYD----------------VIRDEMVERGFVPD 3356
             ++GL PN IT++                +++  M+E+GF+P+
Sbjct: 400  GKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPN 442



 Score = 95.9 bits (237), Expect = 7e-17
 Identities = 70/248 (28%), Positives = 106/248 (42%), Gaps = 56/248 (22%)
 Frame = -1

Query: 3796 REGNREGASKLLDKMKDKGVRPDLITYNILIGALCRKGESRKAVKLLNEMLEMGLSPSHL 3617
            +E    G   +  +M  + + P+LIT+N +I  LC+ G+  KA  ++++M   G  P+ +
Sbjct: 207  KENEFGGVEFVYKEMIRRKISPNLITFNTVINGLCKVGKLNKAGDVVDDMKVWGFWPNVV 266

Query: 3616 TYNTLIDGFCGEG--------------------------------------NLATALNTR 3551
            TYNTLIDG+C  G                                      NL+ AL   
Sbjct: 267  TYNTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVF 326

Query: 3550 TRMEREGKRANIVTYNVLIKGLCQKGRMEEANGLLNEMLEKGLVPNRITYDV-------- 3395
              M+ +G +  +VTYN L+ GLC +G++ EA  LL+EML   L PN ITY+         
Sbjct: 327  EEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKK 386

Query: 3394 --------IRDEMVERGFVPDIDGHLYGGV*EIEKTVSLHFFCLAQRMLHIF--DSENQE 3245
                    + D + ++G  P++          I     LH +C   +M   F       E
Sbjct: 387  KLLEEARELFDNIGKQGLTPNV----------ITFNTLLHGYCKFGKMEEAFLLQKVMLE 436

Query: 3244 KGLYQNAS 3221
            KG   NAS
Sbjct: 437  KGFLPNAS 444



 Score = 75.5 bits (184), Expect = 1e-10
 Identities = 42/117 (35%), Positives = 69/117 (58%), Gaps = 3/117 (2%)
 Frame = -1

Query: 3727 LITYNILIGALCRKGESRKAVKLLNEMLEMGLSPSHLTYNTLIDGFCGEGNLATALNTRT 3548
            +++ N L+ AL ++ E      +  EM+   +SP+ +T+NT+I+G C  G L  A +   
Sbjct: 195  VLSCNPLLSALVKENEFGGVEFVYKEMIRRKISPNLITFNTVINGLCKVGKLNKAGDVVD 254

Query: 3547 RMEREGKRANIVTYNVLIKGLCQKGR---MEEANGLLNEMLEKGLVPNRITYDVIRD 3386
             M+  G   N+VTYN LI G C+ GR   M +A+ +L EM+E  + PN +T++V+ D
Sbjct: 255  DMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLID 311


>ref|XP_002512435.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223548396|gb|EEF49887.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 546

 Score =  209 bits (532), Expect = 5e-51
 Identities = 95/153 (62%), Positives = 126/153 (82%)
 Frame = -1

Query: 3796 REGNREGASKLLDKMKDKGVRPDLITYNILIGALCRKGESRKAVKLLNEMLEMGLSPSHL 3617
            R+G+ E A  L+ +M  K ++ DLITYNILI +LC KGE +KA++LL+EM   GL PS L
Sbjct: 388  RKGDLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQL 447

Query: 3616 TYNTLIDGFCGEGNLATALNTRTRMEREGKRANIVTYNVLIKGLCQKGRMEEANGLLNEM 3437
            TYNT+IDG+C EGNL  ALN R++ME+ G+ AN+ TYNVLIKG C+K ++E+ANGLLNEM
Sbjct: 448  TYNTMIDGYCKEGNLRAALNLRSQMEKVGRLANVATYNVLIKGFCKKDKLEDANGLLNEM 507

Query: 3436 LEKGLVPNRITYDVIRDEMVERGFVPDIDGHLY 3338
            LEKGL+PNR+TY+++ +EM+E+GFVPDI+GHLY
Sbjct: 508  LEKGLIPNRMTYEIVTEEMMEKGFVPDIEGHLY 540



 Score =  110 bits (275), Expect = 3e-21
 Identities = 56/136 (41%), Positives = 82/136 (60%)
 Frame = -1

Query: 3775 ASKLLDKMKDKGVRPDLITYNILIGALCRKGESRKAVKLLNEMLEMGLSPSHLTYNTLID 3596
            A +L D M  +G+ P++ TYNILI A C+      A  L   ML  G+ P   TYN LI 
Sbjct: 325  AGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIA 384

Query: 3595 GFCGEGNLATALNTRTRMEREGKRANIVTYNVLIKGLCQKGRMEEANGLLNEMLEKGLVP 3416
            G C +G+L  A N  + M+ +  +A+++TYN+LI  LC KG M++A  LL+EM  KGL P
Sbjct: 385  GLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRLLDEMCRKGLKP 444

Query: 3415 NRITYDVIRDEMVERG 3368
            +++TY+ + D   + G
Sbjct: 445  SQLTYNTMIDGYCKEG 460



 Score =  109 bits (272), Expect = 6e-21
 Identities = 58/165 (35%), Positives = 91/165 (55%), Gaps = 19/165 (11%)
 Frame = -1

Query: 3790 GNREGASKLLDKMKDKGVRPDLITYNILIGALCRKGESRKAVK---LLNEMLEMGLSPSH 3620
            G    A  +++ MK +GV  ++ITYN LI   C+ G+  K  K   +L EM   G+ P+ 
Sbjct: 177  GKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGICPNE 236

Query: 3619 LTYNTLIDGFCGEGNLATALNTRTRMEREGKRANIVTYNVLIKGLCQKGRMEEANGLLNE 3440
            +T+N LIDGFC + N++ A+     M R+G + N+VTYN LI GLC  G++ EA  L ++
Sbjct: 237  VTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQ 296

Query: 3439 MLEKGLVPNRITYDVIR----------------DEMVERGFVPDI 3353
            M+   L PN IT++ +                 D+M ++G  P++
Sbjct: 297  MVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNV 341



 Score = 96.7 bits (239), Expect = 4e-17
 Identities = 48/147 (32%), Positives = 83/147 (56%), Gaps = 5/147 (3%)
 Frame = -1

Query: 3790 GNREGASKLLDKMKDKGVRPDLITYNILIGALCRKGESRKAVKLLNEMLEMGLSPSHLTY 3611
            G    A  +L +M+  G+ P+ +T+NILI   C+      A+K+  EM   G+ P+ +TY
Sbjct: 215  GKMYKADAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTY 274

Query: 3610 NTLIDGFCGEGNLATALNTRTRMEREGKRANIVTYNVLIKGLCQKGRMEEANGLLNEMLE 3431
            N+LI+G C  G +  A   R +M     + NI+T+N L+ G C+   +++A  L ++M +
Sbjct: 275  NSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPK 334

Query: 3430 KGLVPNRITYDVI-----RDEMVERGF 3365
            +G+ PN  TY+++     +DE +E  F
Sbjct: 335  QGITPNVTTYNILIDAYCKDENMEDAF 361



 Score = 96.7 bits (239), Expect = 4e-17
 Identities = 49/141 (34%), Positives = 84/141 (59%)
 Frame = -1

Query: 3790 GNREGASKLLDKMKDKGVRPDLITYNILIGALCRKGESRKAVKLLNEMLEMGLSPSHLTY 3611
            G    A+ L D+M +  ++P++IT+N L+   C+    ++A +L ++M + G++P+  TY
Sbjct: 285  GKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTY 344

Query: 3610 NTLIDGFCGEGNLATALNTRTRMEREGKRANIVTYNVLIKGLCQKGRMEEANGLLNEMLE 3431
            N LID +C + N+  A      M  +G   ++ TYN LI GLC+KG +E A  L++EM  
Sbjct: 345  NILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDT 404

Query: 3430 KGLVPNRITYDVIRDEMVERG 3368
            K L  + ITY+++ D +  +G
Sbjct: 405  KHLKADLITYNILIDSLCNKG 425



 Score = 94.7 bits (234), Expect = 2e-16
 Identities = 48/143 (33%), Positives = 80/143 (55%)
 Frame = -1

Query: 3796 REGNREGASKLLDKMKDKGVRPDLITYNILIGALCRKGESRKAVKLLNEMLEMGLSPSHL 3617
            ++ N   A K+  +M  +GV+P+++TYN LI  LC  G+  +A  L ++M+   L P+ +
Sbjct: 248  KDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNII 307

Query: 3616 TYNTLIDGFCGEGNLATALNTRTRMEREGKRANIVTYNVLIKGLCQKGRMEEANGLLNEM 3437
            T+N L++GFC    +  A      M ++G   N+ TYN+LI   C+   ME+A  L   M
Sbjct: 308  THNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIM 367

Query: 3436 LEKGLVPNRITYDVIRDEMVERG 3368
            L KG+ P+  TY+ +   +  +G
Sbjct: 368  LGKGVCPDVSTYNCLIAGLCRKG 390



 Score = 85.1 bits (209), Expect = 1e-13
 Identities = 50/157 (31%), Positives = 79/157 (50%), Gaps = 19/157 (12%)
 Frame = -1

Query: 3757 KMKDKGVRPDLITYNILIGALCRKGESRKAVKLLNEMLEMGLSPSHLTYNTLIDGFCGEG 3578
            +M  + + P LI++NI+I  LC+ G+  KA  ++ +M   G+S + +TYNTLIDG+C  G
Sbjct: 153  EMIRRRIEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKMG 212

Query: 3577 NLATALNTRT---RMEREGKRANIVTYNVLIKGLCQKGRMEEANGLLNEMLEKGLVPNRI 3407
             +            M  +G   N VT+N+LI G C+   +  A  +  EM  +G+ PN +
Sbjct: 213  KIGKMYKADAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVV 272

Query: 3406 TYD----------------VIRDEMVERGFVPDIDGH 3344
            TY+                 +RD+MV     P+I  H
Sbjct: 273  TYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITH 309



 Score = 74.7 bits (182), Expect = 2e-10
 Identities = 39/127 (30%), Positives = 70/127 (55%), Gaps = 3/127 (2%)
 Frame = -1

Query: 3757 KMKDKGVRPDLITYNILIGALCRKGESRKAVKLLNEMLEMGLSPSHLTYNTLIDGFCGEG 3578
            +  D G++  + + N L+  L + GE      +  EM+   + P+ +++N +I+G C  G
Sbjct: 118  RASDYGLKLSVTSCNPLMSGLVKVGEIGDMEFVYKEMIRRRIEPTLISFNIVINGLCKVG 177

Query: 3577 NLATALNTRTRMEREGKRANIVTYNVLIKGLCQK---GRMEEANGLLNEMLEKGLVPNRI 3407
             L  A +    M+  G  AN++TYN LI G C+    G+M +A+ +L EM   G+ PN +
Sbjct: 178  KLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGICPNEV 237

Query: 3406 TYDVIRD 3386
            T++++ D
Sbjct: 238  TFNILID 244


>ref|XP_003537787.1| PREDICTED: pentatricopeptide repeat-containing protein At1g09820-like
            [Glycine max]
          Length = 583

 Score =  208 bits (530), Expect = 8e-51
 Identities = 97/153 (63%), Positives = 124/153 (81%)
 Frame = -1

Query: 3796 REGNREGASKLLDKMKDKGVRPDLITYNILIGALCRKGESRKAVKLLNEMLEMGLSPSHL 3617
            R  N   A KLL++M++  ++ D++TYNILIG  C+ GE  KA KLL EML +G+ P+H+
Sbjct: 425  RNQNVRAAKKLLNEMENYELKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHV 484

Query: 3616 TYNTLIDGFCGEGNLATALNTRTRMEREGKRANIVTYNVLIKGLCQKGRMEEANGLLNEM 3437
            TYNTL+DG+C EGNL  AL  RT+ME+EGKRAN+VTYNVLIKG C+ G++E+AN LLNEM
Sbjct: 485  TYNTLMDGYCMEGNLKAALKVRTQMEKEGKRANVVTYNVLIKGFCKTGKLEDANRLLNEM 544

Query: 3436 LEKGLVPNRITYDVIRDEMVERGFVPDIDGHLY 3338
            LEKGL PNR TYDV+R EM+E+GF+PDI+GHLY
Sbjct: 545  LEKGLNPNRTTYDVVRLEMLEKGFIPDIEGHLY 577



 Score =  110 bits (274), Expect = 4e-21
 Identities = 67/204 (32%), Positives = 109/204 (53%), Gaps = 12/204 (5%)
 Frame = -1

Query: 3796 REGNREGASKLLDKMKDKGVRPDLITYNILIGALCRKGESRK---AVKLLNEMLEMGLSP 3626
            + G    A  +++ +K  G  P+++TYN LI   C+KG + K   A  +L EML   + P
Sbjct: 212  KAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDGHCKKGSAGKMYRADAILKEMLANKICP 271

Query: 3625 SHLTYNTLIDGFCGEGNLATALNTRTRMEREGKRANIVTYNVLIKGLCQKGRMEEANGLL 3446
            + +T+NTLIDGFC + N+  A N    M+R+G + NIVTYN LI GL   G+++EA  L 
Sbjct: 272  NEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLINGLSNNGKLDEAIALW 331

Query: 3445 NEMLEKGLVPNRITYDVIRDEMVERGFVPDIDGHLYGGV*E-------IEKTVSLHFFCL 3287
            ++M+  GL PN +T++ + +   ++  + +    L+  + E       I     +  FC 
Sbjct: 332  DKMVGLGLKPNIVTFNALINGFCKKKMIKEA-RKLFDDIAEQDLVPNAITFNTMIDAFCK 390

Query: 3286 AQRMLHIFDSENQ--EKGLYQNAS 3221
            A  M   F   N   ++G++ N S
Sbjct: 391  AGMMEEGFALHNSMLDEGIFPNVS 414



 Score =  101 bits (252), Expect = 1e-18
 Identities = 51/130 (39%), Positives = 74/130 (56%)
 Frame = -1

Query: 3775 ASKLLDKMKDKGVRPDLITYNILIGALCRKGESRKAVKLLNEMLEMGLSPSHLTYNTLID 3596
            A KL D + ++ + P+ IT+N +I A C+ G   +   L N ML+ G+ P+  TYN LI 
Sbjct: 362  ARKLFDDIAEQDLVPNAITFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIA 421

Query: 3595 GFCGEGNLATALNTRTRMEREGKRANIVTYNVLIKGLCQKGRMEEANGLLNEMLEKGLVP 3416
            G C   N+  A      ME    +A++VTYN+LI G C+ G   +A  LL EML  G+ P
Sbjct: 422  GLCRNQNVRAAKKLLNEMENYELKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKP 481

Query: 3415 NRITYDVIRD 3386
            N +TY+ + D
Sbjct: 482  NHVTYNTLMD 491



 Score = 95.5 bits (236), Expect = 1e-16
 Identities = 49/133 (36%), Positives = 75/133 (56%)
 Frame = -1

Query: 3790 GNREGASKLLDKMKDKGVRPDLITYNILIGALCRKGESRKAVKLLNEMLEMGLSPSHLTY 3611
            G  + A  L DKM   G++P+++T+N LI   C+K   ++A KL +++ E  L P+ +T+
Sbjct: 322  GKLDEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLVPNAITF 381

Query: 3610 NTLIDGFCGEGNLATALNTRTRMEREGKRANIVTYNVLIKGLCQKGRMEEANGLLNEMLE 3431
            NT+ID FC  G +         M  EG   N+ TYN LI GLC+   +  A  LLNEM  
Sbjct: 382  NTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEMEN 441

Query: 3430 KGLVPNRITYDVI 3392
              L  + +TY+++
Sbjct: 442  YELKADVVTYNIL 454



 Score = 92.4 bits (228), Expect = 8e-16
 Identities = 44/135 (32%), Positives = 79/135 (58%)
 Frame = -1

Query: 3796 REGNREGASKLLDKMKDKGVRPDLITYNILIGALCRKGESRKAVKLLNEMLEMGLSPSHL 3617
            ++ N   A    ++M+ +G++P+++TYN LI  L   G+  +A+ L ++M+ +GL P+ +
Sbjct: 285  KDENVLAAKNAFEEMQRQGLKPNIVTYNSLINGLSNNGKLDEAIALWDKMVGLGLKPNIV 344

Query: 3616 TYNTLIDGFCGEGNLATALNTRTRMEREGKRANIVTYNVLIKGLCQKGRMEEANGLLNEM 3437
            T+N LI+GFC +  +  A      +  +    N +T+N +I   C+ G MEE   L N M
Sbjct: 345  TFNALINGFCKKKMIKEARKLFDDIAEQDLVPNAITFNTMIDAFCKAGMMEEGFALHNSM 404

Query: 3436 LEKGLVPNRITYDVI 3392
            L++G+ PN  TY+ +
Sbjct: 405  LDEGIFPNVSTYNCL 419



 Score = 76.6 bits (187), Expect = 5e-11
 Identities = 44/133 (33%), Positives = 73/133 (54%), Gaps = 3/133 (2%)
 Frame = -1

Query: 3775 ASKLLDKMKDKGVRPDLITYNILIGALCRKGESRKAVKLLNEMLEMGLSPSHLTYNTLID 3596
            A ++  +++D G +  L + N L+ AL +  E+ +   +  EM++  + P+  T+N  I+
Sbjct: 149  ACEVFRRVQDYGFKLSLNSCNPLLSALVKGNETGEMQYVYKEMIKRRIQPNLTTFNIFIN 208

Query: 3595 GFCGEGNLATALNTRTRMEREGKRANIVTYNVLIKGLCQK---GRMEEANGLLNEMLEKG 3425
            G C  G L  A +    ++  G   NIVTYN LI G C+K   G+M  A+ +L EML   
Sbjct: 209  GLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDGHCKKGSAGKMYRADAILKEMLANK 268

Query: 3424 LVPNRITYDVIRD 3386
            + PN IT++ + D
Sbjct: 269  ICPNEITFNTLID 281