BLASTX nr result

ID: Coptis24_contig00007770 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00007770
         (514 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270167.1| PREDICTED: uncharacterized protein LOC100240...   167   1e-39
ref|XP_002520693.1| conserved hypothetical protein [Ricinus comm...   164   7e-39
ref|XP_002320369.1| predicted protein [Populus trichocarpa] gi|2...   153   2e-35
ref|XP_002872793.1| hypothetical protein ARALYDRAFT_911887 [Arab...   150   1e-34
ref|XP_004158948.1| PREDICTED: uncharacterized LOC101222027 [Cuc...   148   4e-34

>ref|XP_002270167.1| PREDICTED: uncharacterized protein LOC100240762 [Vitis vinifera]
           gi|296086638|emb|CBI32273.3| unnamed protein product
           [Vitis vinifera]
          Length = 180

 Score =  167 bits (422), Expect = 1e-39
 Identities = 84/112 (75%), Positives = 94/112 (83%)
 Frame = -1

Query: 337 SKSRPFSISNPQCLNDEEEGGPQGLVQDLRVPDHWLVPAKALQESEWLRITLHKWLDDEY 158
           S  R  S S+PQ     EEG  + LVQDLRVPDHWL P+KAL+ESEWLR+TLHKWLDDEY
Sbjct: 55  SVPRSQSSSDPQSY---EEGDEETLVQDLRVPDHWLNPSKALEESEWLRVTLHKWLDDEY 111

Query: 157 CPETTNEEISKVAANSYYDSLVVKRSDLGEILLKIARDLESISYQESFHGAF 2
           CPE TN EIS+VAANSYY SLV K++DLGEILLK+AR+LESISYQESFHGAF
Sbjct: 112 CPEATNIEISRVAANSYYRSLVEKQTDLGEILLKMARELESISYQESFHGAF 163


>ref|XP_002520693.1| conserved hypothetical protein [Ricinus communis]
           gi|223540078|gb|EEF41655.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 203

 Score =  164 bits (415), Expect = 7e-39
 Identities = 87/138 (63%), Positives = 101/138 (73%), Gaps = 1/138 (0%)
 Frame = -1

Query: 412 NAPSIKAPSLTSFPVSLRTLNHPSLSKSRPFSISNPQCLNDE-EEGGPQGLVQDLRVPDH 236
           N+P       +S P+  R     S S S P   SNPQ  + + +E  P+  V+ LRVPDH
Sbjct: 29  NSPISFTIQSSSNPLRPRFTRTVSRSHSPP---SNPQNSSQQGDENDPESHVETLRVPDH 85

Query: 235 WLVPAKALQESEWLRITLHKWLDDEYCPETTNEEISKVAANSYYDSLVVKRSDLGEILLK 56
           WL+P  ALQESEWLR+TLHKWLDDEYCPE TN EISKVAA SYY+ LV KR+DLGEILL+
Sbjct: 86  WLLPPNALQESEWLRVTLHKWLDDEYCPEETNIEISKVAARSYYECLVEKRNDLGEILLR 145

Query: 55  IARDLESISYQESFHGAF 2
           +ARDLESISYQESFHGAF
Sbjct: 146 MARDLESISYQESFHGAF 163


>ref|XP_002320369.1| predicted protein [Populus trichocarpa] gi|222861142|gb|EEE98684.1|
           predicted protein [Populus trichocarpa]
          Length = 202

 Score =  153 bits (386), Expect = 2e-35
 Identities = 74/110 (67%), Positives = 91/110 (82%), Gaps = 4/110 (3%)
 Frame = -1

Query: 319 SISNPQCLNDEEEGGP----QGLVQDLRVPDHWLVPAKALQESEWLRITLHKWLDDEYCP 152
           S S PQ  N +E+G      + LVQDLRVP HWL+P+KA++ES+WL++TLHKWLDDEYCP
Sbjct: 74  SFSTPQ--NSQEDGDDDEEEESLVQDLRVPTHWLLPSKAMEESQWLKVTLHKWLDDEYCP 131

Query: 151 ETTNEEISKVAANSYYDSLVVKRSDLGEILLKIARDLESISYQESFHGAF 2
           E TN EISKVAA SYY+SL+ K++DLG ILL +AR+LESISY+ESFHGAF
Sbjct: 132 EETNVEISKVAAQSYYESLLEKQTDLGVILLNMARNLESISYKESFHGAF 181


>ref|XP_002872793.1| hypothetical protein ARALYDRAFT_911887 [Arabidopsis lyrata subsp.
           lyrata] gi|297318630|gb|EFH49052.1| hypothetical protein
           ARALYDRAFT_911887 [Arabidopsis lyrata subsp. lyrata]
          Length = 174

 Score =  150 bits (378), Expect = 1e-34
 Identities = 80/152 (52%), Positives = 102/152 (67%), Gaps = 12/152 (7%)
 Frame = -1

Query: 421 WKC-----NAPSIKAPSLTS---FPVSLRT--LNHP--SLSKSRPFSISNPQCLNDEEEG 278
           W C     N  ++   SLT    FP ++R   ++ P  S  K     + N Q    E E 
Sbjct: 4   WVCSYVTRNVVNLHPFSLTKHFDFPATIRRRPVSFPITSAPKFPSLKLRNSQSSTHEGEE 63

Query: 277 GPQGLVQDLRVPDHWLVPAKALQESEWLRITLHKWLDDEYCPETTNEEISKVAANSYYDS 98
           G +  VQ L +P+ WL+P++A++ESEWLR+TLHKWLDDEYCPE TN EIS+VAA SYY S
Sbjct: 64  GSESSVQALTIPEEWLLPSRAIEESEWLRVTLHKWLDDEYCPEPTNVEISEVAAKSYYSS 123

Query: 97  LVVKRSDLGEILLKIARDLESISYQESFHGAF 2
           L+ K +D+GEILLK+A+DL SISYQESFHGAF
Sbjct: 124 LLEKETDMGEILLKMAQDLTSISYQESFHGAF 155


>ref|XP_004158948.1| PREDICTED: uncharacterized LOC101222027 [Cucumis sativus]
          Length = 155

 Score =  148 bits (374), Expect = 4e-34
 Identities = 69/96 (71%), Positives = 83/96 (86%)
 Frame = -1

Query: 289 EEEGGPQGLVQDLRVPDHWLVPAKALQESEWLRITLHKWLDDEYCPETTNEEISKVAANS 110
           EE+  P+  V+ LRVPD W VP+KAL+ESEWLR+TLHKWLD+EYCPE TN +ISKVAA S
Sbjct: 43  EEDDDPELEVESLRVPDEWSVPSKALEESEWLRVTLHKWLDEEYCPEETNVDISKVAAKS 102

Query: 109 YYDSLVVKRSDLGEILLKIARDLESISYQESFHGAF 2
           YY+SL+ K +DLGEILL +AR+LESISY+ESFHGAF
Sbjct: 103 YYNSLLKKTTDLGEILLNMARELESISYKESFHGAF 138


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