BLASTX nr result

ID: Coptis24_contig00007758 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00007758
         (312 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACU80553.2| cellulose synthase [Leucaena leucocephala]              98   8e-19
gb|AFZ78557.1| cellulose synthase [Populus tomentosa]                  97   1e-18
gb|AFZ78554.1| cellulose synthase [Populus tomentosa]                  97   1e-18
ref|XP_003559270.1| PREDICTED: probable cellulose synthase A cat...    97   1e-18
gb|AEE60898.1| cellulose synthase [Populus tomentosa]                  97   1e-18

>gb|ACU80553.2| cellulose synthase [Leucaena leucocephala]
          Length = 1073

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 47/86 (54%), Positives = 59/86 (68%)
 Frame = -2

Query: 278  PVIILIYPCLFPMQVSNEASIWAILLFSSILSCVVLESRWSAVRIQEWWRNQQFWVIAGV 99
            P + L+       Q+SN ASIW I LF SI +  +LE RWS V I EWWRN+QFWVI GV
Sbjct: 866  PAVCLLTNKFIIPQISNIASIWFISLFISIFATGILEMRWSGVGIDEWWRNEQFWVIGGV 925

Query: 98   SSHLFALFQGFIKVLMGLKISSSGTT 21
            SSHLFA+FQG +KVL G+  + + T+
Sbjct: 926  SSHLFAVFQGLLKVLAGIDTNFTVTS 951


>gb|AFZ78557.1| cellulose synthase [Populus tomentosa]
          Length = 1079

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 47/86 (54%), Positives = 59/86 (68%)
 Frame = -2

Query: 278  PVIILIYPCLFPMQVSNEASIWAILLFSSILSCVVLESRWSAVRIQEWWRNQQFWVIAGV 99
            P I L+       Q+SN ASIW I LF SI +  +LE RWS V I EWWRN+QFWVI GV
Sbjct: 872  PAICLLTDKFIIPQISNIASIWFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGV 931

Query: 98   SSHLFALFQGFIKVLMGLKISSSGTT 21
            S+HLFA+FQG +KVL G+  + + T+
Sbjct: 932  SAHLFAVFQGLLKVLAGIDTNFTVTS 957


>gb|AFZ78554.1| cellulose synthase [Populus tomentosa]
          Length = 1079

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 47/86 (54%), Positives = 59/86 (68%)
 Frame = -2

Query: 278  PVIILIYPCLFPMQVSNEASIWAILLFSSILSCVVLESRWSAVRIQEWWRNQQFWVIAGV 99
            P I L+       Q+SN ASIW I LF SI +  +LE RWS V I EWWRN+QFWVI GV
Sbjct: 872  PAICLLTDKFIIPQISNIASIWFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGV 931

Query: 98   SSHLFALFQGFIKVLMGLKISSSGTT 21
            S+HLFA+FQG +KVL G+  + + T+
Sbjct: 932  SAHLFAVFQGLLKVLAGIDTNFTVTS 957


>ref|XP_003559270.1| PREDICTED: probable cellulose synthase A catalytic subunit 2
            [UDP-forming]-like [Brachypodium distachyon]
          Length = 1201

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 46/86 (53%), Positives = 59/86 (68%)
 Frame = -2

Query: 278  PVIILIYPCLFPMQVSNEASIWAILLFSSILSCVVLESRWSAVRIQEWWRNQQFWVIAGV 99
            P + L+       Q+SN ASIW I LF SI +  +LE RWS V I EWWRN+QFWVI G+
Sbjct: 994  PAVCLLTGRFIIPQISNIASIWFISLFISIFATGILEMRWSGVGIDEWWRNEQFWVIGGI 1053

Query: 98   SSHLFALFQGFIKVLMGLKISSSGTT 21
            S+HLFA+FQG +KVL G+  S + T+
Sbjct: 1054 SAHLFAVFQGLLKVLAGIDTSFTVTS 1079


>gb|AEE60898.1| cellulose synthase [Populus tomentosa]
          Length = 1079

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 47/86 (54%), Positives = 59/86 (68%)
 Frame = -2

Query: 278  PVIILIYPCLFPMQVSNEASIWAILLFSSILSCVVLESRWSAVRIQEWWRNQQFWVIAGV 99
            P I L+       Q+SN ASIW I LF SI +  +LE RWS V I EWWRN+QFWVI GV
Sbjct: 872  PAICLLTDKFIIPQISNIASIWFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGV 931

Query: 98   SSHLFALFQGFIKVLMGLKISSSGTT 21
            S+HLFA+FQG +KVL G+  + + T+
Sbjct: 932  SAHLFAVFQGLLKVLAGIDTNFTVTS 957


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