BLASTX nr result

ID: Coptis24_contig00007748 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00007748
         (1463 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004141513.1| PREDICTED: peptide chain release factor 1-li...   205   2e-50
ref|XP_003548256.1| PREDICTED: uncharacterized protein LOC100793...   205   2e-50
gb|EAY76760.1| hypothetical protein OsI_04716 [Oryza sativa Indi...   205   2e-50
ref|XP_002263666.2| PREDICTED: peptide chain release factor 1-li...   202   2e-49
ref|XP_003564802.1| PREDICTED: uncharacterized protein LOC100830...   201   3e-49

>ref|XP_004141513.1| PREDICTED: peptide chain release factor 1-like [Cucumis sativus]
           gi|449526225|ref|XP_004170114.1| PREDICTED: peptide
           chain release factor 1-like [Cucumis sativus]
          Length = 240

 Score =  205 bits (522), Expect = 2e-50
 Identities = 113/183 (61%), Positives = 129/183 (70%)
 Frame = +3

Query: 312 DGKQVEDCYIKLSDEQLMGQCEMTTFKSSGPGGQHRNKRETAVRLKHGPTGIIAQASEDR 491
           +GKQ    Y+ LSDE+LM QCEM TFK+SGPGGQHRNKRE+AVRLKH PTGIIAQA EDR
Sbjct: 64  NGKQ----YLVLSDEELMKQCEMGTFKASGPGGQHRNKRESAVRLKHIPTGIIAQAVEDR 119

Query: 492 SQHMNXXXXXXXXXXXXXXKVRTPIPDLQSYAPPPHLLQILPLKSTLRPSASSASQIGPN 671
           SQH N              KVR P+ DL+ Y+PPP LLQILPLKST+RP      QIGPN
Sbjct: 120 SQHKNRSSALARLRALLALKVRNPV-DLEDYSPPPELLQILPLKSTVRP-PECGPQIGPN 177

Query: 672 NSKFVLGMQALLDLLYAVGGSVADAAKLLGLSTGAXXXXXXXXXXXXXAVNHLRASKGMK 851
           NSKF+ GMQALLDL+  + GSV+D AKLLGL+TGA             AVN +R SKG+K
Sbjct: 178 NSKFLPGMQALLDLISTLDGSVSDTAKLLGLTTGALSRLILSDDALRMAVNDIRMSKGLK 237

Query: 852 PLK 860
           PLK
Sbjct: 238 PLK 240


>ref|XP_003548256.1| PREDICTED: uncharacterized protein LOC100793467 [Glycine max]
          Length = 250

 Score =  205 bits (522), Expect = 2e-50
 Identities = 112/178 (62%), Positives = 127/178 (71%)
 Frame = +3

Query: 327 EDCYIKLSDEQLMGQCEMTTFKSSGPGGQHRNKRETAVRLKHGPTGIIAQASEDRSQHMN 506
           E CY+ LSDE+LM QCEM TFK+SGPGGQHRNKRE+AVRLKH PTGIIAQASEDRSQH N
Sbjct: 75  EKCYLNLSDEELMRQCEMDTFKASGPGGQHRNKRESAVRLKHLPTGIIAQASEDRSQHKN 134

Query: 507 XXXXXXXXXXXXXXKVRTPIPDLQSYAPPPHLLQILPLKSTLRPSASSASQIGPNNSKFV 686
                         KVR  + DL++Y+PP  LLQILP KS++R S    SQIGPNN KF 
Sbjct: 135 RASAINRLRSLIALKVRKTV-DLEAYSPPRELLQILPPKSSIRGS-DCGSQIGPNNPKFA 192

Query: 687 LGMQALLDLLYAVGGSVADAAKLLGLSTGAXXXXXXXXXXXXXAVNHLRASKGMKPLK 860
            GMQALLDL++AV GSV++AAK LGLSTGA              VN LRA+KGMKPLK
Sbjct: 193 SGMQALLDLIFAVEGSVSEAAKYLGLSTGALSRLILSDDSLRKEVNDLRATKGMKPLK 250


>gb|EAY76760.1| hypothetical protein OsI_04716 [Oryza sativa Indica Group]
          Length = 246

 Score =  205 bits (522), Expect = 2e-50
 Identities = 111/177 (62%), Positives = 127/177 (71%)
 Frame = +3

Query: 330 DCYIKLSDEQLMGQCEMTTFKSSGPGGQHRNKRETAVRLKHGPTGIIAQASEDRSQHMNX 509
           D Y+ +SD++LMGQCEM TFK+SGPGGQHRNKRE+AVRL+H PTGIIAQA EDRSQHMN 
Sbjct: 72  DDYLGMSDDELMGQCEMGTFKASGPGGQHRNKRESAVRLRHRPTGIIAQAVEDRSQHMNR 131

Query: 510 XXXXXXXXXXXXXKVRTPIPDLQSYAPPPHLLQILPLKSTLRPSASSASQIGPNNSKFVL 689
                        KVR PI +L+ Y PP  LLQILPLKST+R       QIGPNNSKF  
Sbjct: 132 ASALSRLRTLIALKVRKPI-NLEDYTPPVELLQILPLKSTIR-GKDIGPQIGPNNSKFAP 189

Query: 690 GMQALLDLLYAVGGSVADAAKLLGLSTGAXXXXXXXXXXXXXAVNHLRASKGMKPLK 860
           GMQALLDLL+AV GSV++AAKLLGLSTGA             A N LRA+KG+KPL+
Sbjct: 190 GMQALLDLLFAVEGSVSEAAKLLGLSTGAVSRLILSDDSLRAAANELRAAKGLKPLR 246


>ref|XP_002263666.2| PREDICTED: peptide chain release factor 1-like [Vitis vinifera]
           gi|297734721|emb|CBI16955.3| unnamed protein product
           [Vitis vinifera]
          Length = 224

 Score =  202 bits (513), Expect = 2e-49
 Identities = 111/175 (63%), Positives = 124/175 (70%)
 Frame = +3

Query: 336 YIKLSDEQLMGQCEMTTFKSSGPGGQHRNKRETAVRLKHGPTGIIAQASEDRSQHMNXXX 515
           ++ LSDEQLM QCEM+TFKSSGPGGQHRNKRE+AVRLKH PTGIIAQA EDRSQH N   
Sbjct: 52  FLGLSDEQLMKQCEMSTFKSSGPGGQHRNKRESAVRLKHLPTGIIAQAVEDRSQHKNRAS 111

Query: 516 XXXXXXXXXXXKVRTPIPDLQSYAPPPHLLQILPLKSTLRPSASSASQIGPNNSKFVLGM 695
                      KVR  I DL +Y+PP  LLQILP KST+R S     QIGPNN KF LGM
Sbjct: 112 ALARLRTLLALKVRNSI-DLDTYSPPLELLQILPAKSTIRTS-DCGPQIGPNNPKFALGM 169

Query: 696 QALLDLLYAVGGSVADAAKLLGLSTGAXXXXXXXXXXXXXAVNHLRASKGMKPLK 860
            ALLDL++AV GS++DAAKL+GLSTGA             AVN LR SKG+KPLK
Sbjct: 170 LALLDLIFAVEGSISDAAKLMGLSTGALSRLVLSDDSLRMAVNELRTSKGLKPLK 224


>ref|XP_003564802.1| PREDICTED: uncharacterized protein LOC100830192 [Brachypodium
           distachyon]
          Length = 239

 Score =  201 bits (512), Expect = 3e-49
 Identities = 108/177 (61%), Positives = 127/177 (71%)
 Frame = +3

Query: 330 DCYIKLSDEQLMGQCEMTTFKSSGPGGQHRNKRETAVRLKHGPTGIIAQASEDRSQHMNX 509
           D Y+ +SD++LMGQC+M TFKSSGPGGQHRNKRE+AVRL+H PTGI+AQA EDRSQH N 
Sbjct: 65  DDYLGMSDDELMGQCDMGTFKSSGPGGQHRNKRESAVRLRHHPTGIVAQAVEDRSQHKNR 124

Query: 510 XXXXXXXXXXXXXKVRTPIPDLQSYAPPPHLLQILPLKSTLRPSASSASQIGPNNSKFVL 689
                        KVR PI +L+ Y PP  LLQILPLKST+R +    +QIGPNN KF  
Sbjct: 125 SSALSRLRTLIALKVRRPI-NLEDYTPPVELLQILPLKSTIR-AKDVGNQIGPNNPKFSP 182

Query: 690 GMQALLDLLYAVGGSVADAAKLLGLSTGAXXXXXXXXXXXXXAVNHLRASKGMKPLK 860
           GMQALLDLL+AV GSV++AAK+LGLSTGA             A N LRASKG+KPL+
Sbjct: 183 GMQALLDLLFAVEGSVSEAAKILGLSTGALSRLILSDDSLRAAANELRASKGLKPLR 239


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