BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00007743
         (297 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510744.1| chlorophyll A/B binding protein, putative [R...   187   8e-46
ref|XP_002276647.1| PREDICTED: chlorophyll a-b binding protein o...   187   1e-45
ref|XP_002307004.1| light-harvesting complex II protein Lhcb7 [P...   184   5e-45
ref|XP_004169873.1| PREDICTED: chlorophyll a-b binding protein o...   184   9e-45
ref|XP_004145567.1| PREDICTED: chlorophyll a-b binding protein o...   184   9e-45

>ref|XP_002510744.1| chlorophyll A/B binding protein, putative [Ricinus communis]
           gi|223551445|gb|EEF52931.1| chlorophyll A/B binding
           protein, putative [Ricinus communis]
          Length = 329

 Score =  187 bits (475), Expect = 8e-46
 Identities = 83/98 (84%), Positives = 90/98 (91%)
 Frame = +3

Query: 3   AREYSFWYGDERPRWLGPIPYDYPAYLTGELPGDYGFDVLGLSQDPVAFHKYFNFEILHA 182
           AR+ S WYG+ERPRWLGPIPYDYPAYLTGELPGDYGFDV GLS+D VAF +YFNFEILHA
Sbjct: 101 ARKESLWYGEERPRWLGPIPYDYPAYLTGELPGDYGFDVAGLSKDSVAFQRYFNFEILHA 160

Query: 183 RWAMLASLGALVPELLDLSGVVHFIEPVWWRVGYAKLK 296
           RWAMLA+LGAL PE+LDLSG  HFIEPVWWRVGY+KLK
Sbjct: 161 RWAMLAALGALAPEVLDLSGAFHFIEPVWWRVGYSKLK 198


>ref|XP_002276647.1| PREDICTED: chlorophyll a-b binding protein of LHCII type I,
           chloroplastic [Vitis vinifera]
           gi|297745621|emb|CBI40786.3| unnamed protein product
           [Vitis vinifera]
          Length = 331

 Score =  187 bits (474), Expect = 1e-45
 Identities = 81/98 (82%), Positives = 89/98 (90%)
 Frame = +3

Query: 3   AREYSFWYGDERPRWLGPIPYDYPAYLTGELPGDYGFDVLGLSQDPVAFHKYFNFEILHA 182
           A+  S WYG+ERPRWLGPIPYDYPAYLTGELPGDYGFD+ GL +DPVAF KYFNFEILHA
Sbjct: 103 AKNESLWYGEERPRWLGPIPYDYPAYLTGELPGDYGFDIAGLGKDPVAFQKYFNFEILHA 162

Query: 183 RWAMLASLGALVPELLDLSGVVHFIEPVWWRVGYAKLK 296
           RWAMLA+LGAL+PELLDL G  HF+EPVWWRVGY+KLK
Sbjct: 163 RWAMLAALGALLPELLDLLGAFHFVEPVWWRVGYSKLK 200


>ref|XP_002307004.1| light-harvesting complex II protein Lhcb7 [Populus trichocarpa]
           gi|222856453|gb|EEE94000.1| light-harvesting complex II
           protein Lhcb7 [Populus trichocarpa]
          Length = 338

 Score =  184 bits (468), Expect = 5e-45
 Identities = 80/98 (81%), Positives = 90/98 (91%)
 Frame = +3

Query: 3   AREYSFWYGDERPRWLGPIPYDYPAYLTGELPGDYGFDVLGLSQDPVAFHKYFNFEILHA 182
           AR+ SFWYG+ERPRWLGPI Y YP YL+GELPGDYGFDV GL++DPVAF +YFNFEILHA
Sbjct: 110 ARKESFWYGEERPRWLGPISYQYPTYLSGELPGDYGFDVAGLAEDPVAFQRYFNFEILHA 169

Query: 183 RWAMLASLGALVPELLDLSGVVHFIEPVWWRVGYAKLK 296
           RWAMLA+LGAL+PE+LDLSG  HFIEPVWWRVGY+KLK
Sbjct: 170 RWAMLAALGALIPEVLDLSGAFHFIEPVWWRVGYSKLK 207


>ref|XP_004169873.1| PREDICTED: chlorophyll a-b binding protein of LHCII type I,
           chloroplastic-like [Cucumis sativus]
          Length = 338

 Score =  184 bits (466), Expect = 9e-45
 Identities = 79/98 (80%), Positives = 89/98 (90%)
 Frame = +3

Query: 3   AREYSFWYGDERPRWLGPIPYDYPAYLTGELPGDYGFDVLGLSQDPVAFHKYFNFEILHA 182
           AR+ S WYG+ERPRWLGP+PYDYP YLTGELPGDYGFD+ GLS+DPVAF K+FNFEILHA
Sbjct: 107 ARKDSSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKFFNFEILHA 166

Query: 183 RWAMLASLGALVPELLDLSGVVHFIEPVWWRVGYAKLK 296
           RWAMLASLGALVPE+LD+ G  HF EP+WWRVGY+KLK
Sbjct: 167 RWAMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLK 204


>ref|XP_004145567.1| PREDICTED: chlorophyll a-b binding protein of LHCII type I,
           chloroplastic-like [Cucumis sativus]
          Length = 338

 Score =  184 bits (466), Expect = 9e-45
 Identities = 79/98 (80%), Positives = 89/98 (90%)
 Frame = +3

Query: 3   AREYSFWYGDERPRWLGPIPYDYPAYLTGELPGDYGFDVLGLSQDPVAFHKYFNFEILHA 182
           AR+ S WYG+ERPRWLGP+PYDYP YLTGELPGDYGFD+ GLS+DPVAF K+FNFEILHA
Sbjct: 107 ARKDSSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKFFNFEILHA 166

Query: 183 RWAMLASLGALVPELLDLSGVVHFIEPVWWRVGYAKLK 296
           RWAMLASLGALVPE+LD+ G  HF EP+WWRVGY+KLK
Sbjct: 167 RWAMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLK 204