BLASTX nr result

ID: Coptis24_contig00007740 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00007740
         (1380 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266396.1| PREDICTED: protein brittle-1, chloroplastic/...   477   e-132
gb|ABK96044.1| unknown [Populus trichocarpa]                          474   e-131
emb|CAN64851.1| hypothetical protein VITISV_024610 [Vitis vinifera]   473   e-131
ref|XP_002311894.1| predicted protein [Populus trichocarpa] gi|2...   469   e-130
ref|XP_002513312.1| Mitochondrial deoxynucleotide carrier, putat...   466   e-129

>ref|XP_002266396.1| PREDICTED: protein brittle-1, chloroplastic/amyloplastic isoform 1
            [Vitis vinifera] gi|297735760|emb|CBI18447.3| unnamed
            protein product [Vitis vinifera]
          Length = 356

 Score =  477 bits (1227), Expect = e-132
 Identities = 241/358 (67%), Positives = 278/358 (77%)
 Frame = +2

Query: 26   MVQKTPSQKKNYCVMGDVYGXXXXXXXXXXXXDTSFNAADLKFQLPNVGKATKXXXXXXX 205
            M  ++ SQKK+Y V GDVYG            D S +    +FQLP++ +A +       
Sbjct: 1    MALESESQKKSYGVFGDVYGVMMVPKELEIEKDASID--QFRFQLPDLKQAFQDFMRTRE 58

Query: 206  XXXXXXGALAGAMTKAVLGPLETIRTRMVVGVGPRNIAGSFIEVIEQQGWTGLWAGNTVN 385
                  GALAGAMTKAVL PLETIRTRMVVG+G +NI+GSF+EVIEQQGW GLWAGNT+N
Sbjct: 59   VGEFISGALAGAMTKAVLAPLETIRTRMVVGIGSKNISGSFLEVIEQQGWQGLWAGNTIN 118

Query: 386  MLRIIPTQAIELGTFECVKRAVTSAKEKCKQNGGSKLQIGHVSLDVSLSWISPXXXXXXX 565
            MLRIIPTQAIEL TFECVKR++T A+EK  +    KLQIG VSL++S+SWISP       
Sbjct: 119  MLRIIPTQAIELATFECVKRSMTEAQEKWSKKECPKLQIGPVSLNLSISWISPIAVAGAA 178

Query: 566  XXXXSTLVCHPLEVLKDRLTISREAYPTISLALKKMYRDGGIGGMYAGLCPTLIGMLPYS 745
                STL CHPLEVLKDRLT+S + YP+IS+AL K++ DGGIG  YAG+ PTLIGMLPYS
Sbjct: 179  AGIVSTLACHPLEVLKDRLTVSPDIYPSISVALSKIHNDGGIGAFYAGISPTLIGMLPYS 238

Query: 746  TCYYFMYETVKNSYCQAKKKKKLNRAEMLVLGALSGLTASTISFPLEVARKRLMVGALQG 925
            TCYYFMYET+K SYC AKKK  L+R EML++GALSG TASTISFPLEVARKRLMVGALQG
Sbjct: 239  TCYYFMYETMKKSYCTAKKKTSLSRPEMLLIGALSGFTASTISFPLEVARKRLMVGALQG 298

Query: 926  KCPANMAAALSEVIREEGLRGLYRGWGASCLKVMPSSGITWMFYEAWKDILVIEKNLL 1099
            KCP +MAAALSEVIRE+G+ GLYRGWGASCLKVMPSSGITWMFYEAWKDIL+ E+  L
Sbjct: 299  KCPPHMAAALSEVIREQGIMGLYRGWGASCLKVMPSSGITWMFYEAWKDILLAERRHL 356


>gb|ABK96044.1| unknown [Populus trichocarpa]
          Length = 365

 Score =  474 bits (1219), Expect = e-131
 Identities = 240/362 (66%), Positives = 276/362 (76%), Gaps = 7/362 (1%)
 Frame = +2

Query: 35   KTPSQKKNYCVMGDVYGXXXXXXXXXXXXDTSFNAA-------DLKFQLPNVGKATKXXX 193
            +T SQKK   V+GDV G                 +        +L+FQLP++  A +   
Sbjct: 4    ETESQKKKCGVLGDVLGGVTMVLPKELDEPIPLPSPPTLAVPFELRFQLPDLKLAVRDFM 63

Query: 194  XXXXXXXXXXGALAGAMTKAVLGPLETIRTRMVVGVGPRNIAGSFIEVIEQQGWTGLWAG 373
                      GALAGAMTKAVL PLETIRTRMVVGVG +NI+GSF+EVIEQQGW GLWAG
Sbjct: 64   RSREAGEFLSGALAGAMTKAVLAPLETIRTRMVVGVGSKNISGSFLEVIEQQGWQGLWAG 123

Query: 374  NTVNMLRIIPTQAIELGTFECVKRAVTSAKEKCKQNGGSKLQIGHVSLDVSLSWISPXXX 553
            N +NMLRIIPTQAIELGTFECVKRA+TSA+EK  Q+   ++Q+G +SL  SLSWISP   
Sbjct: 124  NGINMLRIIPTQAIELGTFECVKRAMTSAQEKWSQSECPRVQLGPLSLSFSLSWISPVAV 183

Query: 554  XXXXXXXXSTLVCHPLEVLKDRLTISREAYPTISLALKKMYRDGGIGGMYAGLCPTLIGM 733
                    STL CHPLEVLKDRLT+SR+ YPT+S+A+ K+Y+DGGIG  YAG+ PTLIGM
Sbjct: 184  GGAAAGIFSTLACHPLEVLKDRLTVSRDIYPTLSIAISKIYKDGGIGAFYAGISPTLIGM 243

Query: 734  LPYSTCYYFMYETVKNSYCQAKKKKKLNRAEMLVLGALSGLTASTISFPLEVARKRLMVG 913
            LPYSTCYYFMY+T+K SYC+ K KK LNR EML++GA SG TAST+SFPLEVARKRLMVG
Sbjct: 244  LPYSTCYYFMYDTMKTSYCKGKNKKSLNRPEMLLIGAFSGFTASTLSFPLEVARKRLMVG 303

Query: 914  ALQGKCPANMAAALSEVIREEGLRGLYRGWGASCLKVMPSSGITWMFYEAWKDILVIEKN 1093
            ALQGKCP +MAAALSEVIRE GL GLYRGWGASCLKVMPSSGITWMFYEAWKDIL++EK 
Sbjct: 304  ALQGKCPPHMAAALSEVIREGGLMGLYRGWGASCLKVMPSSGITWMFYEAWKDILLVEKR 363

Query: 1094 LL 1099
            LL
Sbjct: 364  LL 365


>emb|CAN64851.1| hypothetical protein VITISV_024610 [Vitis vinifera]
          Length = 356

 Score =  473 bits (1217), Expect = e-131
 Identities = 239/358 (66%), Positives = 276/358 (77%)
 Frame = +2

Query: 26   MVQKTPSQKKNYCVMGDVYGXXXXXXXXXXXXDTSFNAADLKFQLPNVGKATKXXXXXXX 205
            M  ++ SQKK+Y V GDVYG            D S +    +FQ P++ +A +       
Sbjct: 1    MALESESQKKSYGVFGDVYGVMMVPKELEIEKDASID--QFRFQFPDLKQAFQDFMRTRE 58

Query: 206  XXXXXXGALAGAMTKAVLGPLETIRTRMVVGVGPRNIAGSFIEVIEQQGWTGLWAGNTVN 385
                  GALAGAMTKAVL PLETIRTRMVVG+G +NI+GSF+EVIEQQGW GLWAGNT+N
Sbjct: 59   VGEFISGALAGAMTKAVLAPLETIRTRMVVGIGSKNISGSFLEVIEQQGWQGLWAGNTIN 118

Query: 386  MLRIIPTQAIELGTFECVKRAVTSAKEKCKQNGGSKLQIGHVSLDVSLSWISPXXXXXXX 565
            MLRIIPTQAIEL TFECVKR++T A+EK  +    KLQIG VSL++S+SWISP       
Sbjct: 119  MLRIIPTQAIELATFECVKRSMTEAQEKWSKKECPKLQIGPVSLNLSISWISPIAVAGAA 178

Query: 566  XXXXSTLVCHPLEVLKDRLTISREAYPTISLALKKMYRDGGIGGMYAGLCPTLIGMLPYS 745
                STL CHPLEVLKDRLT+S + YP+IS+AL K++ DGGIG  YAG+ PTLIGMLPYS
Sbjct: 179  AGIVSTLACHPLEVLKDRLTVSPDIYPSISVALSKIHNDGGIGAFYAGISPTLIGMLPYS 238

Query: 746  TCYYFMYETVKNSYCQAKKKKKLNRAEMLVLGALSGLTASTISFPLEVARKRLMVGALQG 925
            TCYYFMYET+K SYC AK K  L+R EML++GALSG TASTISFPLEVARKRLMVGALQG
Sbjct: 239  TCYYFMYETMKKSYCTAKXKTSLSRPEMLLIGALSGFTASTISFPLEVARKRLMVGALQG 298

Query: 926  KCPANMAAALSEVIREEGLRGLYRGWGASCLKVMPSSGITWMFYEAWKDILVIEKNLL 1099
            KCP +MAAALSEVIRE+G+ GLYRGWGASCLKVMPSSGITWMFYEAWKDIL+ E+  L
Sbjct: 299  KCPPHMAAALSEVIREQGIMGLYRGWGASCLKVMPSSGITWMFYEAWKDILLAERRHL 356


>ref|XP_002311894.1| predicted protein [Populus trichocarpa] gi|222851714|gb|EEE89261.1|
            predicted protein [Populus trichocarpa]
          Length = 342

 Score =  469 bits (1208), Expect = e-130
 Identities = 230/319 (72%), Positives = 263/319 (82%)
 Frame = +2

Query: 143  DLKFQLPNVGKATKXXXXXXXXXXXXXGALAGAMTKAVLGPLETIRTRMVVGVGPRNIAG 322
            +L+FQLP++  A +             GALAGAMTKAVL PLETIRTRMVVGVG +NI+G
Sbjct: 24   ELRFQLPDLKLAVRDFMRSREAGEFLSGALAGAMTKAVLAPLETIRTRMVVGVGSKNISG 83

Query: 323  SFIEVIEQQGWTGLWAGNTVNMLRIIPTQAIELGTFECVKRAVTSAKEKCKQNGGSKLQI 502
            SF+EVIEQQGW GLWAGN +NMLRIIPTQAIELGTFECVKRA+TSA+EK  Q+   ++Q+
Sbjct: 84   SFLEVIEQQGWQGLWAGNGINMLRIIPTQAIELGTFECVKRAMTSAQEKWSQSECPRVQL 143

Query: 503  GHVSLDVSLSWISPXXXXXXXXXXXSTLVCHPLEVLKDRLTISREAYPTISLALKKMYRD 682
            G +SL  SLSWISP           STL CHPLEVLKDRLT+SR+ YPT+S+A+ K+Y+D
Sbjct: 144  GPLSLSFSLSWISPVAVGGAAAGIFSTLACHPLEVLKDRLTVSRDIYPTLSIAISKIYKD 203

Query: 683  GGIGGMYAGLCPTLIGMLPYSTCYYFMYETVKNSYCQAKKKKKLNRAEMLVLGALSGLTA 862
            GGIG  YAG+ PTLIGMLPYSTCYYFMY+T+K SYC+ K KK LNR EML++GA SG TA
Sbjct: 204  GGIGAFYAGISPTLIGMLPYSTCYYFMYDTMKTSYCKGKNKKSLNRPEMLLIGAFSGFTA 263

Query: 863  STISFPLEVARKRLMVGALQGKCPANMAAALSEVIREEGLRGLYRGWGASCLKVMPSSGI 1042
            ST+SFPLEVARKRLMVGALQGKCP +MAAALSEVIRE GL GLYRGWGASCLKVMPSSGI
Sbjct: 264  STLSFPLEVARKRLMVGALQGKCPPHMAAALSEVIREGGLMGLYRGWGASCLKVMPSSGI 323

Query: 1043 TWMFYEAWKDILVIEKNLL 1099
            TWMFYEAWKDIL++EK LL
Sbjct: 324  TWMFYEAWKDILLVEKRLL 342


>ref|XP_002513312.1| Mitochondrial deoxynucleotide carrier, putative [Ricinus communis]
            gi|223547220|gb|EEF48715.1| Mitochondrial deoxynucleotide
            carrier, putative [Ricinus communis]
          Length = 375

 Score =  466 bits (1200), Expect = e-129
 Identities = 230/318 (72%), Positives = 261/318 (82%)
 Frame = +2

Query: 146  LKFQLPNVGKATKXXXXXXXXXXXXXGALAGAMTKAVLGPLETIRTRMVVGVGPRNIAGS 325
            L+ QLP+   A +             GALAGAMTKAVL PLETIRTRMVVGVG +NI+GS
Sbjct: 58   LRIQLPDPRIAIRDLIRTREVGEFLSGALAGAMTKAVLAPLETIRTRMVVGVGSKNISGS 117

Query: 326  FIEVIEQQGWTGLWAGNTVNMLRIIPTQAIELGTFECVKRAVTSAKEKCKQNGGSKLQIG 505
            F+E+IE+QGW GLWAGN +NMLRIIPTQAIELGTFECVKR +T A+EK  + G  ++QIG
Sbjct: 118  FLEIIEKQGWQGLWAGNAINMLRIIPTQAIELGTFECVKRTMTLAQEKWNETGCPRVQIG 177

Query: 506  HVSLDVSLSWISPXXXXXXXXXXXSTLVCHPLEVLKDRLTISREAYPTISLALKKMYRDG 685
             VSL+ SLSW+SP           STLVCHPLEVLKDRLTIS + YP++S+A+ K+Y DG
Sbjct: 178  PVSLNFSLSWVSPVAVAGAAAGIVSTLVCHPLEVLKDRLTISPDTYPSLSIAISKIYSDG 237

Query: 686  GIGGMYAGLCPTLIGMLPYSTCYYFMYETVKNSYCQAKKKKKLNRAEMLVLGALSGLTAS 865
            GIG  YAG+ PTLIGMLPYSTCYYFMYET+K SYC+ KKKK LNR EML++GAL+G TAS
Sbjct: 238  GIGAFYAGISPTLIGMLPYSTCYYFMYETMKKSYCETKKKKSLNRPEMLLVGALAGFTAS 297

Query: 866  TISFPLEVARKRLMVGALQGKCPANMAAALSEVIREEGLRGLYRGWGASCLKVMPSSGIT 1045
            TISFPLEVARKRLMVGALQGKCP +MAAALSEVIREEGL GLYRGWGASCLKVMPSSGIT
Sbjct: 298  TISFPLEVARKRLMVGALQGKCPPHMAAALSEVIREEGLLGLYRGWGASCLKVMPSSGIT 357

Query: 1046 WMFYEAWKDILVIEKNLL 1099
            WMFYEAWKDIL++EK LL
Sbjct: 358  WMFYEAWKDILLVEKRLL 375


Top