BLASTX nr result
ID: Coptis24_contig00007737
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00007737
(2673 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002285705.2| PREDICTED: LOW QUALITY PROTEIN: transcriptio... 171 1e-39
emb|CAN73178.1| hypothetical protein VITISV_039910 [Vitis vinifera] 171 1e-39
ref|XP_002514013.1| transcription factor, putative [Ricinus comm... 165 7e-38
ref|XP_002306548.1| predicted protein [Populus trichocarpa] gi|2... 139 4e-30
ref|XP_002302331.1| predicted protein [Populus trichocarpa] gi|2... 136 3e-29
>ref|XP_002285705.2| PREDICTED: LOW QUALITY PROTEIN: transcription factor bHLH145-like
[Vitis vinifera]
Length = 421
Score = 171 bits (432), Expect = 1e-39
Identities = 127/350 (36%), Positives = 180/350 (51%), Gaps = 17/350 (4%)
Frame = -3
Query: 1771 PGVAVPVLPTLKSQ-GNEERQKRLFQPLTNPYGCVVSTNESLSVMESLGLPYFKISQRID 1595
PG P L TL + G E Q+ + NP +V T+ SL+ LP+ + SQ +
Sbjct: 71 PGWLSPDLNTLSAPLGLELEQQNIISAYMNPCPNLVPTSGSLTAHTFSVLPHSRPSQPNE 130
Query: 1594 ERKWFYCVPHHCKTGNPAALNTVVQEKLSTPC--NSGVNATSNMVPGSVQKEFFVLDQSG 1421
WFYC+P + A+ N++++EKL NS V N++ QK F V DQSG
Sbjct: 131 PHGWFYCLPRFRQAFTHAS-NSILKEKLPAGPYGNSRVVNAPNVISECAQKRFLVFDQSG 189
Query: 1420 NRGNLILHSLIGSSSQNLNLARATDINACGLRQKELEAKRDL-NHPWPVIYDELDENGKA 1244
++ L+ S+IG+ Q L A L E KRDL H P++ DE +ENG
Sbjct: 190 DQTTLVFSSVIGTPGQCLTSWSPKPSGAHNLSGGEEGTKRDLIYHQGPILTDESNENGGT 249
Query: 1243 NXXXXXXXXXXXXXXXXXXXXXXXXXXXXS---TAHSPSELTVFYNKREEMEGSTDEVTS 1073
+ T HSPS +TV Y+++E +EG +EV S
Sbjct: 250 DVQSEMHEDTEELNALLYSDDEYSYSEDDEETSTGHSPSTMTV-YDRQEWLEGEAEEVAS 308
Query: 1072 SFCATKRKRLADEE---SLLGDTASSFT-----KCEDDAQSSCFSGKTE--GEPYCLEAN 923
S + KR++L + + L DTASS + EDDA+SSC G GE N
Sbjct: 309 SDGSNKRRKLFNGDFNVPSLMDTASSAKPDNSLEYEDDAESSCADGNNPEPGEIQSFSGN 368
Query: 922 KHLRRERICDTMNILQNIIPGGKGKDAVVILDEAVQYLRFLKHKAESLGV 773
K R++RI +T+NILQ++IPGGKGKDA+V+LDEA+ YL+ LK KA++LG+
Sbjct: 369 KRSRKDRIRETVNILQSLIPGGKGKDAIVVLDEAIHYLKSLKLKAKALGL 418
Score = 67.8 bits (164), Expect = 1e-08
Identities = 34/41 (82%), Positives = 35/41 (85%), Gaps = 4/41 (9%)
Frame = -2
Query: 2213 MVCQ----TRFRALKHESGIAGSAAIIVRVIECFQPLQDCQ 2103
MVCQ TRFRALKHE+GIAGSA IIVRVI CFQPLQDCQ
Sbjct: 1 MVCQAASQTRFRALKHENGIAGSATIIVRVIACFQPLQDCQ 41
>emb|CAN73178.1| hypothetical protein VITISV_039910 [Vitis vinifera]
Length = 402
Score = 171 bits (432), Expect = 1e-39
Identities = 127/350 (36%), Positives = 180/350 (51%), Gaps = 17/350 (4%)
Frame = -3
Query: 1771 PGVAVPVLPTLKSQ-GNEERQKRLFQPLTNPYGCVVSTNESLSVMESLGLPYFKISQRID 1595
PG P L TL + G E Q+ + NP +V T+ SL+ LP+ + SQ +
Sbjct: 52 PGWLSPDLNTLSAPLGLELEQQNIISAYMNPCPNLVPTSGSLTAHTFSVLPHSRPSQPNE 111
Query: 1594 ERKWFYCVPHHCKTGNPAALNTVVQEKLSTPC--NSGVNATSNMVPGSVQKEFFVLDQSG 1421
WFYC+P + A+ N++++EKL NS V N++ QK F V DQSG
Sbjct: 112 PHGWFYCLPRFRQAFTHAS-NSILKEKLPAGPYGNSRVVNAPNVISECAQKRFLVFDQSG 170
Query: 1420 NRGNLILHSLIGSSSQNLNLARATDINACGLRQKELEAKRDL-NHPWPVIYDELDENGKA 1244
++ L+ S+IG+ Q L A L E KRDL H P++ DE +ENG
Sbjct: 171 DQTTLVFSSVIGTPGQCLTSWSPKPSGAHNLSGGEEGTKRDLIYHQGPILTDESNENGGT 230
Query: 1243 NXXXXXXXXXXXXXXXXXXXXXXXXXXXXS---TAHSPSELTVFYNKREEMEGSTDEVTS 1073
+ T HSPS +TV Y+++E +EG +EV S
Sbjct: 231 DVQSEMHEDTEELNALLYSDDEYSYSEDDEETSTGHSPSTMTV-YDRQEWLEGEAEEVAS 289
Query: 1072 SFCATKRKRLADEE---SLLGDTASSFT-----KCEDDAQSSCFSGKTE--GEPYCLEAN 923
S + KR++L + + L DTASS + EDDA+SSC G GE N
Sbjct: 290 SDGSNKRRKLFNGDFNVPSLMDTASSAKPDNSLEYEDDAESSCADGNNPEPGEIQSFSGN 349
Query: 922 KHLRRERICDTMNILQNIIPGGKGKDAVVILDEAVQYLRFLKHKAESLGV 773
K R++RI +T+NILQ++IPGGKGKDA+V+LDEA+ YL+ LK KA++LG+
Sbjct: 350 KRSRKDRIRETVNILQSLIPGGKGKDAIVVLDEAIHYLKSLKLKAKALGL 399
Score = 67.8 bits (164), Expect = 1e-08
Identities = 34/41 (82%), Positives = 35/41 (85%), Gaps = 4/41 (9%)
Frame = -2
Query: 2213 MVCQ----TRFRALKHESGIAGSAAIIVRVIECFQPLQDCQ 2103
MVCQ TRFRALKHE+GIAGSA IIVRVI CFQPLQDCQ
Sbjct: 1 MVCQAASQTRFRALKHENGIAGSATIIVRVIACFQPLQDCQ 41
>ref|XP_002514013.1| transcription factor, putative [Ricinus communis]
gi|223547099|gb|EEF48596.1| transcription factor,
putative [Ricinus communis]
Length = 424
Score = 165 bits (417), Expect = 7e-38
Identities = 133/409 (32%), Positives = 187/409 (45%), Gaps = 17/409 (4%)
Frame = -3
Query: 1948 IGDCFDWMEKDSRSRLHQQSTLWQSPNLDYTSTLSYLGQGKPFLALNPSASMTYANGSLP 1769
+GDCF WM +D S +Q WQS NL+Y G PF
Sbjct: 55 LGDCFGWMGEDWGSCYPRQQFDWQSSNLNYL--------GAPF----------------- 89
Query: 1768 GVAVPVLPTLKSQGNEERQKRLFQPLTNPYGCVVSTNESLSVMESLGLPYFKISQRIDER 1589
N E R + NP +VS +L S PY ++Q +
Sbjct: 90 --------------NVEHH-RTIPSVMNPGSDMVSIKGTLPAYPSFDPPYSFVAQANEPH 134
Query: 1588 KWFYCVPHHCKTGNPAALNTVVQEKLSTPCNSGVNA--TSNMVPGSVQKEFFVLDQSGNR 1415
WFYC+P P+ LN+ +E+L N T + G QK F V DQSG++
Sbjct: 135 GWFYCLPRFRHAFAPS-LNSGFKERLPAAANGNNKEVFTPKVESGCSQKRFLVFDQSGDQ 193
Query: 1414 GNLILHSLIGSSSQNLNLARATDINACGLRQKELEAKRDLN-HPWPVIYDELDENGKANX 1238
LI S IG+ AC L++++ K +LN H + D+L EN A+
Sbjct: 194 TTLIFSSGIGTPVPGFTSWGRKPTGACNLKREDPGTKENLNIHLRAIAPDQLGENDGADL 253
Query: 1237 XXXXXXXXXXXXXXXXXXXXXXXXXXXS---TAHSPSELTVFYNKREEMEGSTDEVTSSF 1067
T HSPS +T +N ++ +GST+EV SS
Sbjct: 254 QSEMHEDTDELNALLYSDDDSDYTEDDEVTSTGHSPSTMTA-HNNQDWFKGSTEEVASSG 312
Query: 1066 CATKRKRLAD----EESLLGDTASSFT-----KCEDDAQSSCFSGK--TEGEPYCLEANK 920
+TK+++L D + L DTA+S + E+DA+S C G E +NK
Sbjct: 313 GSTKKRKLFDGGFSDVPALMDTANSVKPVISFEYENDAESRCDDGLYWASSEMGSESSNK 372
Query: 919 HLRRERICDTMNILQNIIPGGKGKDAVVILDEAVQYLRFLKHKAESLGV 773
+R+E+I DT+NILQNIIPGGKGKDA+V+LDEA+ YL+ LK KA++LG+
Sbjct: 373 KMRKEKIRDTVNILQNIIPGGKGKDAIVVLDEAIGYLKSLKVKAKALGL 421
Score = 66.2 bits (160), Expect = 4e-08
Identities = 33/43 (76%), Positives = 35/43 (81%), Gaps = 4/43 (9%)
Frame = -2
Query: 2213 MVCQ----TRFRALKHESGIAGSAAIIVRVIECFQPLQDCQAE 2097
MVCQ T FRALKHE+GIAGSA IIVRVI CFQPLQDCQ +
Sbjct: 1 MVCQAASQTNFRALKHENGIAGSATIIVRVIACFQPLQDCQKQ 43
>ref|XP_002306548.1| predicted protein [Populus trichocarpa] gi|222855997|gb|EEE93544.1|
predicted protein [Populus trichocarpa]
Length = 365
Score = 139 bits (350), Expect = 4e-30
Identities = 122/408 (29%), Positives = 182/408 (44%), Gaps = 23/408 (5%)
Frame = -3
Query: 1927 MEKDSRSRLHQQSTLWQSPNLDYTSTLSYLGQGKPF-LALNPSASMTYANGSLPGVAVPV 1751
M +D S QQ WQSPN +Y GQ L ++P+ +M + NG + P
Sbjct: 1 MGEDWGSLFPQQRFNWQSPNSNYLDASLAFGQQNTLPLLMDPNTNMVFTNG----IGYPF 56
Query: 1750 LPTLKSQGNEERQKRLFQPLTNPYGCVVSTNESLSVMESLGLPYFKISQRIDERKWFYCV 1571
L SQ ++E + R WF+ +
Sbjct: 57 TELLPSQASQEN---------------------------------------EPRGWFHGL 77
Query: 1570 PHHCKTGNPAA----------LNTVVQEKLST-PCNSGVNATSNMVPGSVQKEFFVLDQS 1424
PH + P + L+TV++EKL T P ++ + V G QK V DQS
Sbjct: 78 PHFRQALMPPSNSVHKERRPRLDTVLKEKLPTAPHDNKEDNMPKAVSGCDQKRLLVFDQS 137
Query: 1423 GNRGNLILHSLIGSSSQNLNLARATDINACGLRQKELEAKRDLNHPWPVIYDELDENGKA 1244
G++ LI S +G+ Q L L ++ AK H P+ DE E+
Sbjct: 138 GDQTTLIFSSGVGTPVQCLKSWIPKPTVGFDLNREIPGAKGQNFHLGPIANDEFVEDDGI 197
Query: 1243 NXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTAHSPSELTVFYNKREEMEGSTDEVTSSFC 1064
+ T HSPS +T +++R+ +GS +EV SS
Sbjct: 198 DMHEDTEELNALLYSDDGSVCSEDEVTS--TGHSPSTMTT-HDRRDWFDGSAEEVASSNG 254
Query: 1063 ATKRKRLAD----EESLLGDTASSF--TKC---EDDAQSSCFSGKTE--GEPYCLEANKH 917
+ K+++L D + L DTA+S T+C E+D +S C +G E NK
Sbjct: 255 SNKKRKLFDGGYTDAPSLKDTATSVKPTRCFGHEEDVESRCDNGTNSLSHEMGSESGNKR 314
Query: 916 LRRERICDTMNILQNIIPGGKGKDAVVILDEAVQYLRFLKHKAESLGV 773
+R+E I +TM+ILQN+IPGGKGKDA+V+L+EA+QYL+ LK KA++LG+
Sbjct: 315 MRKENIRETMSILQNLIPGGKGKDAIVVLEEAIQYLKSLKFKAKALGL 362
>ref|XP_002302331.1| predicted protein [Populus trichocarpa] gi|222844057|gb|EEE81604.1|
predicted protein [Populus trichocarpa]
Length = 368
Score = 136 bits (342), Expect = 3e-29
Identities = 124/391 (31%), Positives = 180/391 (46%), Gaps = 16/391 (4%)
Frame = -3
Query: 1897 QQSTLWQSPNLDYTSTLSYLGQ-GKPFLALNPSASMTYANGSLPGVAVPVLPTLKSQGNE 1721
QQ WQSP+ +Y GQ P L ++P+ +M NG LP P L+SQ +
Sbjct: 8 QQQFNWQSPDTNYLGASFSSGQQNNPPLLMDPNVNMISTNG-LP--EYPFAELLRSQVGQ 64
Query: 1720 ERQKRLFQPLTNPYGCVVSTNESLSVMESLGLPYFKISQRIDERKWFYCVPHHCKTGNPA 1541
E + R + GLP F R+ F H
Sbjct: 65 ENEPRGW---------------------FYGLPRF--------RQAFMPPFHSVLKEKRP 95
Query: 1540 ALNTVVQEKLSTPCNSGVNATSNMVPGSVQKEFFVLDQSGNRGNLILHSLIGSSSQNLNL 1361
L+TV++EKL T + G QK F V DQSG++ LI S IG+ +Q L
Sbjct: 96 LLDTVLKEKLPTAPREIKDIVPQSDSGRAQKRFLVFDQSGDQTTLIFSSGIGTPAQCLKS 155
Query: 1360 ARATDINACGLRQKELEAKRDLN-HPWPVIYDELDENG---KANXXXXXXXXXXXXXXXX 1193
A L ++ AK + + H P+ DE E+
Sbjct: 156 WIPKPTIAFDLNKEVTGAKENQSFHLGPISTDEFVEDDGIEMQTDVHEDIEELNALLYSD 215
Query: 1192 XXXXXXXXXXXXSTAHSPSELTVFYNKREEMEGSTDEVTSSFCATKRKRLADEESLLG-- 1019
ST HSP+ +T ++KR+ +GST++V SS + K+++L D + G
Sbjct: 216 DDSDYTEDEEVTSTGHSPNTMTT-HDKRDWFDGSTEDVASSDGSNKKRKLFDGGYIDGPS 274
Query: 1018 --DTASSFT-----KCEDDAQSSCFSGKT--EGEPYCLEANKHLRRERICDTMNILQNII 866
DTA S + EDDA+S C +G E NK +R+ERI +T++ILQN+I
Sbjct: 275 LMDTARSVKPTRDFEYEDDAESRCDNGTNLMSEEMGSESVNKRMRKERIRETVSILQNLI 334
Query: 865 PGGKGKDAVVILDEAVQYLRFLKHKAESLGV 773
PGGKGKDAV++L+EA+QYL+ LK +A++LG+
Sbjct: 335 PGGKGKDAVIVLEEAIQYLKSLKFEAKALGL 365