BLASTX nr result

ID: Coptis24_contig00007735 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00007735
         (861 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002529753.1| biotin synthase, putative [Ricinus communis]...   451   e-124
ref|XP_002263125.1| PREDICTED: biotin synthase [Vitis vinifera] ...   451   e-124
ref|XP_004140874.1| PREDICTED: biotin synthase-like [Cucumis sat...   450   e-124
ref|XP_002327854.1| predicted protein [Populus trichocarpa] gi|2...   447   e-123
ref|XP_002310445.1| predicted protein [Populus trichocarpa] gi|2...   446   e-123

>ref|XP_002529753.1| biotin synthase, putative [Ricinus communis]
           gi|223530751|gb|EEF32619.1| biotin synthase, putative
           [Ricinus communis]
          Length = 375

 Score =  451 bits (1159), Expect = e-124
 Identities = 223/275 (81%), Positives = 248/275 (90%)
 Frame = -3

Query: 859 YDTGLKAQKLMNKDVVLEAAQKAKDAGSTRFCMGAAWRDTVGRKTNFNQILDYVKEIREM 680
           Y+TGLKAQKLM KD VL+AA++AK+AGSTRFCMGAAWRDT+GRKTNFNQILDYVKEIR+M
Sbjct: 101 YNTGLKAQKLMTKDDVLQAAKRAKEAGSTRFCMGAAWRDTIGRKTNFNQILDYVKEIRDM 160

Query: 679 GMEVCCTLGMLEKQQAMELKKAGLTAYNHNLDTSREYYPNVITTRSYDERLETLAFVREA 500
           GMEVCCTLGMLEKQQA ELKKAGLTAYNHNLDTSREYYPN+I+TRSYDERL+TL  VRE 
Sbjct: 161 GMEVCCTLGMLEKQQAAELKKAGLTAYNHNLDTSREYYPNIISTRSYDERLKTLEHVREV 220

Query: 499 GISVCSGGIIGLGEAEDDRVGXXXXXXXXXXXPESVPINALVPVKGTPLENQKPVEIWEM 320
           GI+VCSGGIIGLGEAE+DRVG           PESVPINAL+ VKGTPLE+QKPVEIWEM
Sbjct: 221 GINVCSGGIIGLGEAEEDRVGLLHTLSTLPMHPESVPINALIAVKGTPLEDQKPVEIWEM 280

Query: 319 IRMIATARIVMPKAMVRLSAGRVRFSMSEQALCFLAGANSIFSGEKLLTTPNNDFDADQM 140
           IRMIATARI+MPKAMVRLSAGRVRFS++EQALCFL+GANSIF+GEKLLTTPNNDFDADQ+
Sbjct: 281 IRMIATARIIMPKAMVRLSAGRVRFSIAEQALCFLSGANSIFTGEKLLTTPNNDFDADQL 340

Query: 139 MFKVLGLTPKAPKFSEETKSAFEGERCKEAVSA*G 35
           MFK+LGL PKAP F E+ + A E E C+EAVS+ G
Sbjct: 341 MFKLLGLIPKAPSFPEDEERALESENCQEAVSSSG 375


>ref|XP_002263125.1| PREDICTED: biotin synthase [Vitis vinifera]
           gi|297743757|emb|CBI36640.3| unnamed protein product
           [Vitis vinifera]
          Length = 381

 Score =  451 bits (1159), Expect = e-124
 Identities = 224/275 (81%), Positives = 244/275 (88%)
 Frame = -3

Query: 859 YDTGLKAQKLMNKDVVLEAAQKAKDAGSTRFCMGAAWRDTVGRKTNFNQILDYVKEIREM 680
           Y TG+KAQ+LMNKD VL+AAQKAK+AGSTRFCMGAAWRDTVGRKTNFNQIL+YVKEIR+M
Sbjct: 107 YSTGVKAQRLMNKDAVLQAAQKAKEAGSTRFCMGAAWRDTVGRKTNFNQILEYVKEIRDM 166

Query: 679 GMEVCCTLGMLEKQQAMELKKAGLTAYNHNLDTSREYYPNVITTRSYDERLETLAFVREA 500
           GMEVCCTLGMLEKQQA+ELKKAGLTAYNHNLDTSREYYPN+I TRSYDERLETL  VREA
Sbjct: 167 GMEVCCTLGMLEKQQAIELKKAGLTAYNHNLDTSREYYPNIIRTRSYDERLETLQLVREA 226

Query: 499 GISVCSGGIIGLGEAEDDRVGXXXXXXXXXXXPESVPINALVPVKGTPLENQKPVEIWEM 320
           GI+VCSGGIIGLGEAE+DRVG           PESVPINAL+ VKGTPLE+QKPVEIWEM
Sbjct: 227 GINVCSGGIIGLGEAEEDRVGLLHTLATLPTHPESVPINALLAVKGTPLEDQKPVEIWEM 286

Query: 319 IRMIATARIVMPKAMVRLSAGRVRFSMSEQALCFLAGANSIFSGEKLLTTPNNDFDADQM 140
           +RMIATARIVMPKAMVRLSAGRVRFS+ EQALCFLAGANSIF+G+KLLTTPNNDFDADQ 
Sbjct: 287 VRMIATARIVMPKAMVRLSAGRVRFSVPEQALCFLAGANSIFTGDKLLTTPNNDFDADQQ 346

Query: 139 MFKVLGLTPKAPKFSEETKSAFEGERCKEAVSA*G 35
           MFK+LGL PKAP F E+     E E C++AVS  G
Sbjct: 347 MFKLLGLIPKAPSFDEDVAKTSEAENCEQAVSGSG 381


>ref|XP_004140874.1| PREDICTED: biotin synthase-like [Cucumis sativus]
          Length = 385

 Score =  450 bits (1158), Expect = e-124
 Identities = 224/270 (82%), Positives = 246/270 (91%)
 Frame = -3

Query: 859 YDTGLKAQKLMNKDVVLEAAQKAKDAGSTRFCMGAAWRDTVGRKTNFNQILDYVKEIREM 680
           YDTGLKAQKLM KDVVLEAA+KAK+AGSTRFCMGAAWRDT+GRKTNFNQILDYVKEIREM
Sbjct: 112 YDTGLKAQKLMTKDVVLEAAKKAKEAGSTRFCMGAAWRDTIGRKTNFNQILDYVKEIREM 171

Query: 679 GMEVCCTLGMLEKQQAMELKKAGLTAYNHNLDTSREYYPNVITTRSYDERLETLAFVREA 500
           GMEVCCTLGM+EKQQA++LKKAGLTAYNHNLDTSREYYPN+ITTRSYDERL+TL FVR+A
Sbjct: 172 GMEVCCTLGMIEKQQAIDLKKAGLTAYNHNLDTSREYYPNIITTRSYDERLKTLEFVRDA 231

Query: 499 GISVCSGGIIGLGEAEDDRVGXXXXXXXXXXXPESVPINALVPVKGTPLENQKPVEIWEM 320
           GI+VCSGGIIGLGEAE+DRVG           PESVPINALV VKGTPL++QKPVEIWEM
Sbjct: 232 GINVCSGGIIGLGEAEEDRVGLLHTLATLPTHPESVPINALVAVKGTPLQDQKPVEIWEM 291

Query: 319 IRMIATARIVMPKAMVRLSAGRVRFSMSEQALCFLAGANSIFSGEKLLTTPNNDFDADQM 140
           IRMIATARI MPKAMVRLSAGRV+FS+ EQALCFLAGANSIF+GEKLLTTPNNDFDADQ+
Sbjct: 292 IRMIATARITMPKAMVRLSAGRVKFSVPEQALCFLAGANSIFTGEKLLTTPNNDFDADQL 351

Query: 139 MFKVLGLTPKAPKFSEETKSAFEGERCKEA 50
           MFK+LGL PKAP F+E+ + A E E  +EA
Sbjct: 352 MFKMLGLIPKAPSFTEDAEKAPEEESLQEA 381


>ref|XP_002327854.1| predicted protein [Populus trichocarpa] gi|222837263|gb|EEE75642.1|
           predicted protein [Populus trichocarpa]
          Length = 391

 Score =  447 bits (1151), Expect = e-123
 Identities = 227/287 (79%), Positives = 249/287 (86%), Gaps = 12/287 (4%)
 Frame = -3

Query: 859 YDTGLKAQKLMNKDVVLEAAQKAKDAGSTRFCMGAAWRDTVGRKTNFNQILDYVKEIREM 680
           YDTG+KAQ+LM K+ V+EAA++AK+AGSTRFCMGAAWRDT+GRKTNFNQILDYVK+IR+M
Sbjct: 105 YDTGVKAQRLMTKETVMEAAKRAKEAGSTRFCMGAAWRDTIGRKTNFNQILDYVKDIRDM 164

Query: 679 GMEVCCTLGMLEKQQAMELKKAGLTAYNHNLDTSREYYPNVITTRSYDERLETLAFVREA 500
           GMEVCCTLGMLEKQQA+ELKKAGLTAYNHNLDTSREYYPN+ITTRSYDERLETL  VREA
Sbjct: 165 GMEVCCTLGMLEKQQAVELKKAGLTAYNHNLDTSREYYPNIITTRSYDERLETLQHVREA 224

Query: 499 GISVCSGGIIGLGEAEDDRVGXXXXXXXXXXXPESVPINALVPVKGTPLENQK------- 341
           GI+VCSGGIIGLGEAE+DRVG           PESVPINALV VKGTPL+ QK       
Sbjct: 225 GINVCSGGIIGLGEAEEDRVGLLHTLATLPTHPESVPINALVSVKGTPLQEQKVLLIPVS 284

Query: 340 -----PVEIWEMIRMIATARIVMPKAMVRLSAGRVRFSMSEQALCFLAGANSIFSGEKLL 176
                PVEIWEMIRMI TARIVMPKAMVRLSAGRVRFSMSEQALCFLAGANSIF+GEKLL
Sbjct: 285 YKFSMPVEIWEMIRMIGTARIVMPKAMVRLSAGRVRFSMSEQALCFLAGANSIFTGEKLL 344

Query: 175 TTPNNDFDADQMMFKVLGLTPKAPKFSEETKSAFEGERCKEAVSA*G 35
           TTPNND+DADQ+MFKVLGL PKAP FS E + A E E+C+EAVS+ G
Sbjct: 345 TTPNNDYDADQLMFKVLGLIPKAPSFSGEEEKACEAEQCQEAVSSSG 391


>ref|XP_002310445.1| predicted protein [Populus trichocarpa] gi|222853348|gb|EEE90895.1|
           predicted protein [Populus trichocarpa]
          Length = 382

 Score =  446 bits (1147), Expect = e-123
 Identities = 226/275 (82%), Positives = 244/275 (88%), Gaps = 2/275 (0%)
 Frame = -3

Query: 859 YDTGLKAQKLMNKDVVLEAAQKAKDAGSTRFCMGAAWRDTVGRKTNFNQILDYVKEIREM 680
           Y+TGLK Q+LM K+ V+EAA++AK+AGSTRFCMGAAWRDT+GRKTNFNQILDYVKEIR M
Sbjct: 105 YNTGLKPQRLMTKETVIEAAKRAKEAGSTRFCMGAAWRDTIGRKTNFNQILDYVKEIRGM 164

Query: 679 GMEVCCTLGMLEKQQAMELKKAGLTAYNHNLDTSREYYPNVITTRSYDERLETLAFVREA 500
           GMEVCCTLGMLEKQQA ELKKAGLTAYNHNLDTSREYYPN+ITTRSYDERLETL  VREA
Sbjct: 165 GMEVCCTLGMLEKQQAAELKKAGLTAYNHNLDTSREYYPNIITTRSYDERLETLEHVREA 224

Query: 499 GISVCSGGIIGLGEAEDDRVGXXXXXXXXXXXPESVPINALVPVKGTPLENQKPVEIWEM 320
           GISVCSGGIIGLGEAE+DRVG           PESVPINALV VKGTPL+ QKPVEIWEM
Sbjct: 225 GISVCSGGIIGLGEAEEDRVGLLHTLATLPTHPESVPINALVAVKGTPLQEQKPVEIWEM 284

Query: 319 IRMIATARIVMPKAMVRLSAGRVRFSMSEQALCFLAGANSIFSGEKLLTTPNNDFDADQM 140
           IRMI +ARIVMPKAMVRLSAGRV FSM+EQALCFLAGANSIF+GEKLLTTPNND+DADQ+
Sbjct: 285 IRMIGSARIVMPKAMVRLSAGRVSFSMAEQALCFLAGANSIFTGEKLLTTPNNDYDADQL 344

Query: 139 MFKVLGLTPKAPKFS--EETKSAFEGERCKEAVSA 41
           MFKVLGL PKAP FS  EE   A E ERC+EAVS+
Sbjct: 345 MFKVLGLIPKAPSFSADEEKACACEAERCQEAVSS 379


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