BLASTX nr result
ID: Coptis24_contig00007723
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00007723
(671 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002315110.1| predicted protein [Populus trichocarpa] gi|2... 133 4e-45
ref|XP_002275474.1| PREDICTED: LETM1 and EF-hand domain-containi... 134 6e-44
ref|XP_003635110.1| PREDICTED: LETM1 and EF-hand domain-containi... 133 8e-44
emb|CBI23351.3| unnamed protein product [Vitis vinifera] 133 8e-44
ref|XP_002312206.1| predicted protein [Populus trichocarpa] gi|2... 128 1e-43
>ref|XP_002315110.1| predicted protein [Populus trichocarpa] gi|222864150|gb|EEF01281.1|
predicted protein [Populus trichocarpa]
Length = 658
Score = 133 bits (335), Expect(3) = 4e-45
Identities = 71/129 (55%), Positives = 98/129 (75%)
Frame = +2
Query: 86 LRDWLDFSFNYSVSPSLLILPRSFMVS*KLRHEEVVMSTM*SLPDEVVDAVGITSMPPGN 265
LRDWLD S N+SV SLLIL R+F VS K+R EE V +T+ SLPDEVVD VG+T++P +
Sbjct: 359 LRDWLDLSLNHSVPSSLLILSRAFSVSGKVRPEEAVQATLSSLPDEVVDTVGVTALPSED 418
Query: 266 SLSDKRRKLEFLQKGEEHIRDEEQKEKEQATLKGSGSREEESGTTQEDVALKEMRMPTAK 445
+S++RRKLEFL+ EE I++EE++E+E+ +R +ES ++Q+DVAL+EM +PTA
Sbjct: 419 LVSERRRKLEFLEMQEELIKEEEEEEEEEQ------ARMKESVSSQKDVALEEMTIPTAG 472
Query: 446 EAQQHAKEK 472
EAQ+ AK K
Sbjct: 473 EAQEQAKAK 481
Score = 62.0 bits (149), Expect(3) = 4e-45
Identities = 32/42 (76%), Positives = 34/42 (80%)
Frame = +1
Query: 463 KRKTLEQQEQLCELSRVLAVLASTSSVCRESEAFLRLVNKEV 588
K KTLE+ EQLCELSR LAVLAS SSV RE E FLRLV KE+
Sbjct: 479 KAKTLEKHEQLCELSRALAVLASASSVSREREEFLRLVKKEI 520
Score = 32.7 bits (73), Expect(3) = 4e-45
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = +1
Query: 28 VESLSEAELRHACRDR 75
VESLSEAELR ACRDR
Sbjct: 329 VESLSEAELRQACRDR 344
>ref|XP_002275474.1| PREDICTED: LETM1 and EF-hand domain-containing protein 1,
mitochondrial [Vitis vinifera]
gi|296084337|emb|CBI24725.3| unnamed protein product
[Vitis vinifera]
Length = 764
Score = 134 bits (338), Expect(3) = 6e-44
Identities = 70/129 (54%), Positives = 99/129 (76%)
Frame = +2
Query: 86 LRDWLDFSFNYSVSPSLLILPRSFMVS*KLRHEEVVMSTM*SLPDEVVDAVGITSMPPGN 265
LRDWLD S N+SV SLLIL R+F VS K+R EE V +T+ SLPDEVVD VGIT++P +
Sbjct: 462 LRDWLDLSLNHSVPSSLLILSRAFTVSGKVRPEEAVQATLSSLPDEVVDTVGITALPSED 521
Query: 266 SLSDKRRKLEFLQKGEEHIRDEEQKEKEQATLKGSGSREEESGTTQEDVALKEMRMPTAK 445
S+S++RRKLE+L+ EE I++EE+KE+E+ ++ +E+ +QED+ALKEM +PTA+
Sbjct: 522 SVSERRRKLEYLEMQEELIKEEEEKEEEEQ------AKIKETVVSQEDLALKEMTIPTAR 575
Query: 446 EAQQHAKEK 472
EAQ+ A+ +
Sbjct: 576 EAQEQARAR 584
Score = 60.8 bits (146), Expect(3) = 6e-44
Identities = 30/42 (71%), Positives = 35/42 (83%)
Frame = +1
Query: 463 KRKTLEQQEQLCELSRVLAVLASTSSVCRESEAFLRLVNKEV 588
+ + +E+QEQLCELSR LAVLAS SSV RE E FLRLVNKE+
Sbjct: 582 RARAVEKQEQLCELSRALAVLASASSVSREREEFLRLVNKEI 623
Score = 28.9 bits (63), Expect(3) = 6e-44
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = +1
Query: 28 VESLSEAELRHACRDR 75
VESLSEAELR CR+R
Sbjct: 432 VESLSEAELREDCRER 447
>ref|XP_003635110.1| PREDICTED: LETM1 and EF-hand domain-containing protein 1,
mitochondrial-like [Vitis vinifera]
Length = 504
Score = 133 bits (334), Expect(3) = 8e-44
Identities = 72/130 (55%), Positives = 98/130 (75%), Gaps = 1/130 (0%)
Frame = +2
Query: 86 LRDWLDFSFNYSVSPSLLILPRSFMVS*KLRHEEVVMSTM*SLPDEVVDAVGITSMPPGN 265
LRDWLD S N++V SLLIL R+F VS K++ EE V +T+ SLPDEVVD VG+T++P +
Sbjct: 202 LRDWLDLSLNHAVPSSLLILSRAFTVSGKVKPEEAVQATLSSLPDEVVDTVGVTTLPSED 261
Query: 266 SLSDKRRKLEFLQKGEEHIRDEEQKEKE-QATLKGSGSREEESGTTQEDVALKEMRMPTA 442
S+S++RRKLEFL+ EE I++EE+KE+E QA +K ES Q+DVAL+EM +PTA
Sbjct: 262 SVSERRRKLEFLEMQEELIKEEEEKEEEVQARIK-------ESTVNQKDVALEEMTIPTA 314
Query: 443 KEAQQHAKEK 472
+EAQ+ A+ K
Sbjct: 315 REAQEQAEAK 324
Score = 60.1 bits (144), Expect(3) = 8e-44
Identities = 30/40 (75%), Positives = 34/40 (85%)
Frame = +1
Query: 469 KTLEQQEQLCELSRVLAVLASTSSVCRESEAFLRLVNKEV 588
KTLE+Q+Q+CELSR L VLAS SSV E EAFLRLVNKE+
Sbjct: 324 KTLEKQQQICELSRALVVLASASSVSWEREAFLRLVNKEI 363
Score = 30.8 bits (68), Expect(3) = 8e-44
Identities = 14/16 (87%), Positives = 14/16 (87%)
Frame = +1
Query: 28 VESLSEAELRHACRDR 75
VESLSEAEL ACRDR
Sbjct: 172 VESLSEAELHQACRDR 187
>emb|CBI23351.3| unnamed protein product [Vitis vinifera]
Length = 432
Score = 133 bits (334), Expect(3) = 8e-44
Identities = 72/130 (55%), Positives = 98/130 (75%), Gaps = 1/130 (0%)
Frame = +2
Query: 86 LRDWLDFSFNYSVSPSLLILPRSFMVS*KLRHEEVVMSTM*SLPDEVVDAVGITSMPPGN 265
LRDWLD S N++V SLLIL R+F VS K++ EE V +T+ SLPDEVVD VG+T++P +
Sbjct: 130 LRDWLDLSLNHAVPSSLLILSRAFTVSGKVKPEEAVQATLSSLPDEVVDTVGVTTLPSED 189
Query: 266 SLSDKRRKLEFLQKGEEHIRDEEQKEKE-QATLKGSGSREEESGTTQEDVALKEMRMPTA 442
S+S++RRKLEFL+ EE I++EE+KE+E QA +K ES Q+DVAL+EM +PTA
Sbjct: 190 SVSERRRKLEFLEMQEELIKEEEEKEEEVQARIK-------ESTVNQKDVALEEMTIPTA 242
Query: 443 KEAQQHAKEK 472
+EAQ+ A+ K
Sbjct: 243 REAQEQAEAK 252
Score = 60.1 bits (144), Expect(3) = 8e-44
Identities = 30/40 (75%), Positives = 34/40 (85%)
Frame = +1
Query: 469 KTLEQQEQLCELSRVLAVLASTSSVCRESEAFLRLVNKEV 588
KTLE+Q+Q+CELSR L VLAS SSV E EAFLRLVNKE+
Sbjct: 252 KTLEKQQQICELSRALVVLASASSVSWEREAFLRLVNKEI 291
Score = 30.8 bits (68), Expect(3) = 8e-44
Identities = 14/16 (87%), Positives = 14/16 (87%)
Frame = +1
Query: 28 VESLSEAELRHACRDR 75
VESLSEAEL ACRDR
Sbjct: 100 VESLSEAELHQACRDR 115
>ref|XP_002312206.1| predicted protein [Populus trichocarpa] gi|222852026|gb|EEE89573.1|
predicted protein [Populus trichocarpa]
Length = 687
Score = 128 bits (322), Expect(3) = 1e-43
Identities = 66/129 (51%), Positives = 98/129 (75%)
Frame = +2
Query: 86 LRDWLDFSFNYSVSPSLLILPRSFMVS*KLRHEEVVMSTM*SLPDEVVDAVGITSMPPGN 265
L DWLD S N SV SLLIL R+F +S K+R EE V +T+ SLPDEVVD VG+T++P +
Sbjct: 384 LHDWLDLSLNRSVPSSLLILSRAFSISGKVRPEEAVQATLSSLPDEVVDTVGVTALPSED 443
Query: 266 SLSDKRRKLEFLQKGEEHIRDEEQKEKEQATLKGSGSREEESGTTQEDVALKEMRMPTAK 445
S+S++RRKLE+L+ EE I++EE++E+E+ ++ +ES ++Q+DVAL+EM +PTA+
Sbjct: 444 SVSERRRKLEYLEMQEELIKEEEEEEEEEQ------AKMKESVSSQKDVALEEMSIPTAR 497
Query: 446 EAQQHAKEK 472
+A++ AK K
Sbjct: 498 DAREQAKAK 506
Score = 62.0 bits (149), Expect(3) = 1e-43
Identities = 32/42 (76%), Positives = 34/42 (80%)
Frame = +1
Query: 463 KRKTLEQQEQLCELSRVLAVLASTSSVCRESEAFLRLVNKEV 588
K KTLE+ EQLCELSR LAVLAS SSV RE E FLRLV KE+
Sbjct: 504 KAKTLEKHEQLCELSRALAVLASASSVSREREEFLRLVKKEI 545
Score = 32.7 bits (73), Expect(3) = 1e-43
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = +1
Query: 28 VESLSEAELRHACRDR 75
VESLSEAELR ACRDR
Sbjct: 354 VESLSEAELRQACRDR 369