BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00007715
         (494 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003613053.1| Translation initiation factor IF-2 [Medicago...   237   8e-61
ref|XP_002279490.2| PREDICTED: translation initiation factor IF-...   232   3e-59
ref|XP_004149759.1| PREDICTED: translation initiation factor IF-...   229   2e-58
ref|NP_192854.2| translation initiation factor IF-2 [Arabidopsis...   212   2e-53
ref|XP_002872554.1| hypothetical protein ARALYDRAFT_489954 [Arab...   212   2e-53

>ref|XP_003613053.1| Translation initiation factor IF-2 [Medicago truncatula]
           gi|355514388|gb|AES96011.1| Translation initiation
           factor IF-2 [Medicago truncatula]
          Length = 749

 Score =  237 bits (604), Expect = 8e-61
 Identities = 120/165 (72%), Positives = 140/165 (84%), Gaps = 1/165 (0%)
 Frame = +3

Query: 3   AVGLKPLKRVKYPRKKNRGRPPVDTPYVPIQ-KIEKSMPDRTINIFEGMTISELAKRTGR 179
           A GLKP KR KY RK +R +PPVD P+VP +    KS PD+TI IFEGMT+ ELAKR+G+
Sbjct: 40  AYGLKPPKREKYVRKGSRNQPPVDAPHVPCKVTATKSNPDKTIEIFEGMTLVELAKRSGK 99

Query: 180 SIPFLEEILVNVGEEVGSDFDPVSIDVVELIAMEVGVNVKRLHSNEGAELLPRPPVVTVM 359
           S+  L++IL  VGE++ S+F+P+S+D+ EL+AMEVGVNVKRLHS EG E+LPRPPVVTVM
Sbjct: 100 SVSSLQDILTTVGEKIQSEFEPLSMDISELVAMEVGVNVKRLHSTEGKEVLPRPPVVTVM 159

Query: 360 GHVDHGKTSLLDALRQTSVAAKEAGGITQHLGAFVVDMPSGASIT 494
           GHVDHGKTSLLDALRQTSVAAKEAGGITQHLGAFVV M SGASIT
Sbjct: 160 GHVDHGKTSLLDALRQTSVAAKEAGGITQHLGAFVVGMSSGASIT 204


>ref|XP_002279490.2| PREDICTED: translation initiation factor IF-2-like [Vitis vinifera]
           gi|296089697|emb|CBI39516.3| unnamed protein product
           [Vitis vinifera]
          Length = 725

 Score =  232 bits (591), Expect = 3e-59
 Identities = 118/164 (71%), Positives = 138/164 (84%), Gaps = 2/164 (1%)
 Frame = +3

Query: 9   GLKPLKRVKYPRKKNRGRPPVDTPYV--PIQKIEKSMPDRTINIFEGMTISELAKRTGRS 182
           GLK  KR KY +++++ +PPV+ PYV    ++  KS+PDRTI+IFEGMTI ELAK T  S
Sbjct: 94  GLKTPKREKYVKRESKMQPPVEAPYVHPKPKRTTKSLPDRTIDIFEGMTIGELAKHTNES 153

Query: 183 IPFLEEILVNVGEEVGSDFDPVSIDVVELIAMEVGVNVKRLHSNEGAELLPRPPVVTVMG 362
           I  L+EILVNVGE+  S+FD +SID+ EL+AME GVNV+RLHSNEGAE+ PRP VVTVMG
Sbjct: 154 ISTLQEILVNVGEKFDSEFDTLSIDIAELVAMETGVNVRRLHSNEGAEIFPRPAVVTVMG 213

Query: 363 HVDHGKTSLLDALRQTSVAAKEAGGITQHLGAFVVDMPSGASIT 494
           HVDHGKTSLLDALRQTSVAA+EAGGITQHLGAFVV MPSGASIT
Sbjct: 214 HVDHGKTSLLDALRQTSVAAREAGGITQHLGAFVVSMPSGASIT 257


>ref|XP_004149759.1| PREDICTED: translation initiation factor IF-2-like [Cucumis
           sativus]
          Length = 724

 Score =  229 bits (584), Expect = 2e-58
 Identities = 116/164 (70%), Positives = 138/164 (84%), Gaps = 2/164 (1%)
 Frame = +3

Query: 9   GLKPLKRVKYPRKKNRGRPPVDTPYVPIQKIEK--SMPDRTINIFEGMTISELAKRTGRS 182
           GLK  K+ K+ RK  R +PPV+ PYVP +      S+ D+TI IF+GMTI ELAKR+G S
Sbjct: 93  GLKTQKKEKFVRKDGRNQPPVEAPYVPPKPKHSIGSVSDKTIEIFDGMTIVELAKRSGES 152

Query: 183 IPFLEEILVNVGEEVGSDFDPVSIDVVELIAMEVGVNVKRLHSNEGAELLPRPPVVTVMG 362
           I  L++IL NVGE++ S+FDP+SIDV EL+AMEVGVN+KRLHS+EG+E+LPRP VVTVMG
Sbjct: 153 ISRLQDILTNVGEKINSEFDPLSIDVAELVAMEVGVNIKRLHSSEGSEILPRPAVVTVMG 212

Query: 363 HVDHGKTSLLDALRQTSVAAKEAGGITQHLGAFVVDMPSGASIT 494
           HVDHGKTSLLDALRQTSVAA+EAGGITQHLGAFVV+M SGASIT
Sbjct: 213 HVDHGKTSLLDALRQTSVAAREAGGITQHLGAFVVEMASGASIT 256


>ref|NP_192854.2| translation initiation factor IF-2 [Arabidopsis thaliana]
           gi|51536512|gb|AAU05494.1| At4g11160 [Arabidopsis
           thaliana] gi|51969726|dbj|BAD43555.1| putative
           translation initiation factor IF-2 [Arabidopsis
           thaliana] gi|51970152|dbj|BAD43768.1| putative
           translation initiation factor IF-2 [Arabidopsis
           thaliana] gi|51970248|dbj|BAD43816.1| putative
           translation initiation factor IF-2 [Arabidopsis
           thaliana] gi|51970442|dbj|BAD43913.1| putative
           translation initiation factor IF-2 [Arabidopsis
           thaliana] gi|53850507|gb|AAU95430.1| At4g11160
           [Arabidopsis thaliana] gi|62318855|dbj|BAD93919.1|
           translation initiation factor IF-2 like protein
           [Arabidopsis thaliana] gi|62319537|dbj|BAD94965.1|
           translation initiation factor IF-2 like protein
           [Arabidopsis thaliana] gi|332657579|gb|AEE82979.1|
           translation initiation factor IF-2 [Arabidopsis
           thaliana]
          Length = 743

 Score =  212 bits (540), Expect = 2e-53
 Identities = 102/154 (66%), Positives = 129/154 (83%), Gaps = 3/154 (1%)
 Frame = +3

Query: 42  RKKNRGRPPVDTPYVP--IQKIEKSMPDRTINIFEGMTISELAKRTGRSIPFLEEILVNV 215
           R+K   +PPV+ PYVP  ++++ K +P +T++IFEGMT+ EL+KRTG S+  L+ IL+NV
Sbjct: 118 REKKTDKPPVEAPYVPPRLKRLAKGLPGKTVDIFEGMTLLELSKRTGESVAVLQSILINV 177

Query: 216 GEEVGSDFDPVSIDVVELIAMEVGVNVKRLHSNEGAELLPRPPVVTVMGHVDHGKTSLLD 395
           GE   S+FD +S+DV EL+AME+G+NV+R HS EG+E+LPRPPVVTVMGHVDHGKTSLLD
Sbjct: 178 GETFSSEFDTISVDVAELLAMEIGINVRRQHSTEGSEILPRPPVVTVMGHVDHGKTSLLD 237

Query: 396 ALRQTSVAAKEAGGITQHLGAFVVDMP-SGASIT 494
           ALR TSVAA+EAGGITQH+GAFVV MP SG SIT
Sbjct: 238 ALRNTSVAAREAGGITQHVGAFVVGMPDSGTSIT 271


>ref|XP_002872554.1| hypothetical protein ARALYDRAFT_489954 [Arabidopsis lyrata subsp.
           lyrata] gi|297318391|gb|EFH48813.1| hypothetical protein
           ARALYDRAFT_489954 [Arabidopsis lyrata subsp. lyrata]
          Length = 746

 Score =  212 bits (540), Expect = 2e-53
 Identities = 101/154 (65%), Positives = 130/154 (84%), Gaps = 3/154 (1%)
 Frame = +3

Query: 42  RKKNRGRPPVDTPYVP--IQKIEKSMPDRTINIFEGMTISELAKRTGRSIPFLEEILVNV 215
           R+K   +PPV+ PYVP  ++++ K +P++T++IFEGMT+ EL++RTG S+  L+ IL+NV
Sbjct: 121 REKKSDKPPVEAPYVPPRLKRLAKGLPEKTVDIFEGMTLLELSRRTGESVAVLQSILINV 180

Query: 216 GEEVGSDFDPVSIDVVELIAMEVGVNVKRLHSNEGAELLPRPPVVTVMGHVDHGKTSLLD 395
           GE   S+FD +S+DV EL+AME+G+NV+R HS EG+E+LPRPPVVTVMGHVDHGKTSLLD
Sbjct: 181 GETFSSEFDTISVDVAELLAMEIGINVRRQHSTEGSEILPRPPVVTVMGHVDHGKTSLLD 240

Query: 396 ALRQTSVAAKEAGGITQHLGAFVVDMP-SGASIT 494
           ALR TSVAA+EAGGITQH+GAFVV MP SG SIT
Sbjct: 241 ALRNTSVAAREAGGITQHVGAFVVGMPDSGTSIT 274