BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00007712
         (1447 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510608.1| conserved hypothetical protein [Ricinus comm...   118   3e-24
ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis ...   109   2e-21
emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]   108   3e-21
ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|2...   104   5e-20
ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus ...   103   9e-20

>ref|XP_002510608.1| conserved hypothetical protein [Ricinus communis]
            gi|223551309|gb|EEF52795.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 406

 Score =  118 bits (296), Expect = 3e-24
 Identities = 114/442 (25%), Positives = 175/442 (39%), Gaps = 41/442 (9%)
 Frame = -3

Query: 1319 SRWSQIPDHXXXXXXXXXXXXXL-VRFSCVCRPWRSHATPLLVPNLNLIPWLIVPYGNYT 1143
            S WS++P                 +    VC+ W S         L  +PWL++PY    
Sbjct: 2    SNWSELPQELLQTITQKQSNYVDYISTRAVCKSWWSAIPKKPHDLLCQLPWLLLPYHKNN 61

Query: 1142 CKIASNICDKTLGFFNIQDGKTYKIDTPQLADRRICGSCSGGWLVTVHENSEIQVYHPFS 963
                        GF+N+ DGKTY ++ P+  ++R CGS S GWLV V +   I + +P +
Sbjct: 62   --------PNHRGFYNLADGKTYHLELPETIEKRCCGS-SHGWLVMVEDTPSIFLLNPLT 112

Query: 962  KKVIQLPPVTKLPGVTGCFIGRRNELYYVVPNRPHFSYRVLEXXXXXXXXSEVRERYIYK 783
            K  I+LP ++  P              Y      + + R +           +RE YI K
Sbjct: 113  KARIELPSLSTFP--------------YFPTEVVYENSRNINEYFNTKAKLRIRETYIRK 158

Query: 782  AIMS--PSTG--IVMVIQGRFRT---LAVCRVGRVKKWYSVKGDIEGM-YNDIAIYNREF 627
            AI+S  PSTG   VM I     +   +A C+ G    W++++   + + Y D+  +  +F
Sbjct: 159  AIVSEDPSTGNFAVMAIYKTINSTENIAFCKSGDAT-WFTIQETSQKIHYQDVMFHRGKF 217

Query: 626  YAVNDFGQVFVVSSVDSGRPVIKLVISGPYG--FDYCKSYLVECKGEXXXXXXXXXXXXV 453
            YAV+D G+V +  +  +   VI++    P      Y + YL     +             
Sbjct: 218  YAVDDKGRVSICITDINPPSVIQVADPPPVPPLMGYKQWYLASLDEDLILAGRFRKYRGS 277

Query: 452  -----TACFMINKLDFSGPRWVEVKHLNRGYVDDVGKDCAMFVGYNDSFCISTSSFTGYE 288
                 T  FM+ KLD S   W+E+  L          D   F+G+N    IST ++  Y 
Sbjct: 278  GYEYQTHKFMVYKLDASSSNWLELDGLG---------DMLSFLGWNCFHSISTQNYRNYS 328

Query: 287  EHSVYFTGDILKRGLSFASELQETIYGDLGVFNLKNDVIKRFFSKSFQ------------ 144
             + +YFT D    G  F  E       D G+FNL +  ++R    S+             
Sbjct: 329  GNCIYFTDDKFIVGSDFPWEGH-----DYGIFNLDDKSVQRLGLPSYPIKLPILPFIYGY 383

Query: 143  -------------PSPIWFTTN 117
                         P PIW T N
Sbjct: 384  ERSLKRDRSSFILPPPIWVTIN 405


>ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera]
          Length = 389

 Score =  109 bits (272), Expect = 2e-21
 Identities = 110/428 (25%), Positives = 177/428 (41%), Gaps = 29/428 (6%)
 Frame = -3

Query: 1313 WSQI-PDHXXXXXXXXXXXXXLVRFSCVCRPWRSHA--TPLLVPNLNLIPWLIVPYG--N 1149
            WSQ+ P+               VRF  VC  WR+    TP  +P    +PWL++P    +
Sbjct: 4    WSQLHPELLDFIAKKFKIYTDYVRFRAVCHNWRASVPKTPHHLPTQ--LPWLMLPQSQPH 61

Query: 1148 YTCKIASNICDKTLGFFNIQDGKTYKIDTPQLADRRICGSCSGGWLVTVHENSEIQVYHP 969
            +T +           FF++   K + +  P+ + RR     S GWL+ + E  EI + +P
Sbjct: 62   HTHR----------PFFSLSLNKFHFLQLPEASHRRRRRGSSHGWLLILDEAPEIFLLNP 111

Query: 968  FSKKVIQLPPVTKLPGVTG---CFIGRRNELYYVVPNRPHFSYRVLEXXXXXXXXSEVRE 798
             ++  + LPP++  P V       +GR             ++ R            ++R+
Sbjct: 112  LTRSKVHLPPLSTFPNVVRFNFADVGR------------EYALRTSSGDVYTRSLKKMRD 159

Query: 797  RYIYKAIM--SPSTG---IVMVIQGRFRTLAVCRVGRVKKWYSVKGDIEGMYNDIAIYNR 633
             +I K I+  SP+ G   I +VI  +   LA+CR  +    ++   D +    D+  +  
Sbjct: 160  SFIKKTILSSSPANGSDFIAVVILNQTGDLALCR--KSDDSWTFLEDAQSYAEDVIFHRG 217

Query: 632  EFYAVNDFGQVFVVSSVDSGRPVIKLVISGPYGFDYCKSYLVECKGE-----------XX 486
             FYAVN +G +  V  V    P +  +I  P  F     YLVE   E             
Sbjct: 218  LFYAVNKYGSI-AVCDVSGSSPRVS-IIEMPQQFGGDLQYLVESGEELLLVTRYLDLTYD 275

Query: 485  XXXXXXXXXXVTACFMINKLDFSGPRWVEVKHLNRGYVDDVGKDCAMFVGYNDSFCISTS 306
                       T  F + +LD   PRW  V  L          D A+F+G N S  +S+ 
Sbjct: 276  VEPDQTSLIYRTTRFQVCRLDLKAPRWEVVSSLG---------DRALFLGENLSLSLSSV 326

Query: 305  SFTGYEEHSVYFTGDILKRGLSFASELQETIYG--DLGVFNLKNDVIKRFFSKSFQ---P 141
             F G + + +Y+T D       ++ +  + I G  DLG+FNL++  I+      F+   P
Sbjct: 327  DFPGCKGNCIYYTDD-------YSEDNYDGIGGEQDLGIFNLEDGSIEPLPCSHFRIRWP 379

Query: 140  SPIWFTTN 117
             P+W T N
Sbjct: 380  PPLWVTPN 387


>emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]
          Length = 389

 Score =  108 bits (270), Expect = 3e-21
 Identities = 111/428 (25%), Positives = 178/428 (41%), Gaps = 29/428 (6%)
 Frame = -3

Query: 1313 WSQI-PDHXXXXXXXXXXXXXLVRFSCVCRPWRSHA--TPLLVPNLNLIPWLIVPYG--N 1149
            WSQ+ P+               VRF  VC  WR+    TP  +P    +PWL++P    +
Sbjct: 4    WSQLHPELLDFIAKKFKIYTDYVRFRAVCHNWRASVPKTPHHLPTQ--LPWLMLPQSQPH 61

Query: 1148 YTCKIASNICDKTLGFFNIQDGKTYKIDTPQLADRRICGSCSGGWLVTVHENSEIQVYHP 969
            +T +           FF++   K + +  P+ + RR     S GWL+ + E  EI + +P
Sbjct: 62   HTHR----------PFFSLSLNKFHFLQLPEASHRRRRRGSSHGWLLILDEAPEIFLLNP 111

Query: 968  FSKKVIQLPPVTKLPGVTG---CFIGRRNELYYVVPNRPHFSYRVLEXXXXXXXXSEVRE 798
             ++  + LPP++  P V       +GR             ++ R            ++R+
Sbjct: 112  LTRSKVHLPPLSTFPNVVRFNFADVGR------------EYALRTSSGDVYTRSLKKMRD 159

Query: 797  RYIYKAIM--SPSTG---IVMVIQGRFRTLAVCRVGRVKKWYSVKGDIEGMYNDIAIYNR 633
             +I K I+  SP+ G   I +VI  +   LA+CR  +    ++   D +    D+  +  
Sbjct: 160  SFIKKTILSSSPANGSDFIAVVILNQTGDLALCR--KSDDSWTFLEDAQSYSEDVIFHRG 217

Query: 632  EFYAVNDFGQVFVVSSVDSGRPVIKLVISGPYGFDYCKSYLVECKGE-----------XX 486
             FYAVN +G +  V  V    P +  +I  P  F     YLVE   E             
Sbjct: 218  LFYAVNKYGSI-AVCDVSGSSPRVS-IIEMPQQFGGDLQYLVESGEELLLVTRYLDLTYD 275

Query: 485  XXXXXXXXXXVTACFMINKLDFSGPRWVEVKHLNRGYVDDVGKDCAMFVGYNDSFCISTS 306
                       T  F + +LD   PRW  V  L          D A+F+G N S  +S+ 
Sbjct: 276  VEXDQTSLIYRTTRFQVCRLDSKAPRWEVVSSLG---------DRALFLGENLSLSLSSV 326

Query: 305  SFTGYEEHSVYFTGDILKRGLSFASELQETIYG--DLGVFNLKNDVIKRFFSKSFQ---P 141
             F G + + +Y+T D       ++ +  + I G  DLG+FNL++  I+      F+   P
Sbjct: 327  DFPGCKGNCIYYTDD-------YSEDNYDGIGGEQDLGIFNLEDGSIEPLPCSHFRIRWP 379

Query: 140  SPIWFTTN 117
             P+W T N
Sbjct: 380  PPLWVTPN 387


>ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|222842400|gb|EEE79947.1|
            predicted protein [Populus trichocarpa]
          Length = 393

 Score =  104 bits (260), Expect = 5e-20
 Identities = 112/432 (25%), Positives = 174/432 (40%), Gaps = 29/432 (6%)
 Frame = -3

Query: 1325 MASRWSQIPDHXXXXXXXXXXXXXL-VRFSCVCRPWRSHA--TPLLVPNLNLIPWLIVPY 1155
            MA  W+Q+P                 + F  VC  W+S    TP  +P    +PWL++P 
Sbjct: 1    MAVDWTQLPPELIEIISKKITIYSDYLHFQAVCHAWKSSIPKTPNHLPPQ--LPWLLLPQ 58

Query: 1154 GNYTCKIASNICDKTLGFFNIQDGKTYKIDTPQLADRRI-CGSCSGGWLVTVHENSEIQV 978
                    SN       FFN+   K + ++ P+ + R+  CGS S GWL+ + ++  I V
Sbjct: 59   SQ------SNQSSYR-AFFNLSTYKFHSLNLPEASHRKKHCGS-SHGWLIILDDSPSILV 110

Query: 977  YHPFSKKVIQLPPVTKLPGVTG---CFIGRRNELYYVVPNRPHFSYRVLEXXXXXXXXSE 807
             +P +++ I LP ++  P V       +GR   L      R   S R            +
Sbjct: 111  INPLTRRKIHLPAISSFPNVVSFDYANVGREYLLVNPQGERNTASLR------------Q 158

Query: 806  VRERYIYKAIMSPST-------GIVMVIQGRFRTLAVCRVGRVKKWYSVKGDIEGMYNDI 648
            +R+ +I K +MS S         + M I      LA C+ G   + +++  +      D+
Sbjct: 159  MRDGFIKKVVMSSSPLEKKGDFFVAMAILCSTGDLAYCKNG--DECWNIVENSRSFSEDV 216

Query: 647  AIYNREFYAVNDFGQVFVVSSVDSGRPVIKLVISGPYGFDYCKSYLVECKGE-------- 492
              +N  FYAVN  GQ+ VV  V+   P +   I  P        YLV   G+        
Sbjct: 217  IYFNGLFYAVNKAGQI-VVCDVNGNSPKVSF-IETPRQIGGDMQYLVS-SGDGLLLVTRY 273

Query: 491  XXXXXXXXXXXXVTACFMINKLDFSGPRWVEVKHLNRGYVDDVGKDCAMFVGYNDSFCIS 312
                         TA F + KLD +GPRW  V  L          D  +F+G N S  +S
Sbjct: 274  LDLDVEFDIFIYKTARFEVFKLDLNGPRWERVTSLG---------DMMLFIGENSSLALS 324

Query: 311  TSSFTGYEEHSVYFTGDILKRGLSFASELQETIYGDLGVFNLKNDVI-------KRFFSK 153
             S  +G     +Y+T D      ++   + E    DLG+F L +  I       +  +S+
Sbjct: 325  ASGLSGCMGDCIYYTDDYSAN--NYDGHIGE---HDLGIFKLSDGSIEPLPCYPRNSYSR 379

Query: 152  SFQPSPIWFTTN 117
               P P+W + N
Sbjct: 380  LQWPPPLWISPN 391


>ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus communis]
            gi|223551319|gb|EEF52805.1| ubiquitin-protein ligase,
            putative [Ricinus communis]
          Length = 398

 Score =  103 bits (258), Expect = 9e-20
 Identities = 112/437 (25%), Positives = 180/437 (41%), Gaps = 34/437 (7%)
 Frame = -3

Query: 1325 MASRWSQIPDHXXXXXXXXXXXXXLVRFS-CVCRPWRSHA--TPLLVPNLNLIPWLIVPY 1155
            M   WSQ+P                  +S  VC  WR     TP  +P    +PWL++P 
Sbjct: 1    MIMDWSQLPPELIEIISKGLTIYSDYLYSRAVCHAWRFSIPKTPNHLPPQ--LPWLMLPQ 58

Query: 1154 GNYTCKIASNICDKTLGFFNIQDGKTYKIDTPQLADR-RICGSCSGGWLVTVHENSEIQV 978
                    S        FF++   K + ++ P+++ R R CGS S GWL+ + +   I +
Sbjct: 59   SQ------SQSNQSRRAFFSLSTNKFHFLNLPEVSYRKRHCGS-SHGWLMILDDTPTILL 111

Query: 977  YHPFSKKVIQLPPVTKLPGVTG---CFIGRRNELYYVVPNRPHFSYRVLEXXXXXXXXSE 807
             +P ++  + LPP++  P V       IGR   L  ++  R   S R            +
Sbjct: 112  INPLTRAKLSLPPLSSFPNVISFNYSDIGREYALRNLLGERVTVSLR------------Q 159

Query: 806  VRERYIYKAIMSPS-----TGIVMVIQGRFRTLAVCRVGRVKKWYSVKGDIEGMYNDIAI 642
            +R+ +I K ++S S       +V+ I  +   LA CR G  K W  V+ +      D+  
Sbjct: 160  MRDSFIRKVVLSSSPLKDNNFVVIAILNQTDDLAYCRNGD-KSWSLVE-NARSFCEDVIF 217

Query: 641  YNREFYAVNDFGQVFVVSSVDSGRPVIKLVISGPYGFDYCKSYLV-------------EC 501
             N  FYAVN  GQ+ V+  + S  P +  + + P        YLV             + 
Sbjct: 218  VNGMFYAVNKAGQI-VICDISSDSPRVSFMET-PRQAGGDMQYLVNSGDELLLVTRYLDL 275

Query: 500  KGEXXXXXXXXXXXXVTACFMINKLDFSGPRWVEVKHLNRGYVDDVGKDCAMFVGYNDSF 321
            + E             T  F + +LD++GP+W+ +  L          D A+F+G N S 
Sbjct: 276  EYEFDHPDMEPHLIYRTIRFEVFRLDWNGPQWLRMSTLG---------DKALFIGENSSL 326

Query: 320  CISTSSFTGYEEHSVYFTGDILKRGLS--FASELQETIYGDLGVFNLKNDVIK------R 165
             +S + F+G   + +Y+T D L       F          DLG+F L ++ I+      R
Sbjct: 327  SLSATDFSGCMGNCIYYTDDYLDANYDGHFGDH-------DLGIFKLCDETIEPLPCYPR 379

Query: 164  FFSKSFQPS-PIWFTTN 117
             F+   Q S P+W + N
Sbjct: 380  NFTSPLQWSPPLWVSPN 396