BLASTX nr result

ID: Coptis24_contig00007706 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00007706
         (548 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|2...    61   1e-08
gb|ABN08700.1| Endonuclease/exonuclease/phosphatase [Medicago tr...    63   3e-08
ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|2...    62   6e-08
ref|XP_002331746.1| predicted protein [Populus trichocarpa] gi|2...    62   6e-08
ref|XP_002331745.1| predicted protein [Populus trichocarpa] gi|2...    62   6e-08

>ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|222870351|gb|EEF07482.1|
           predicted protein [Populus trichocarpa]
          Length = 1046

 Score = 60.8 bits (146), Expect(2) = 1e-08
 Identities = 27/87 (31%), Positives = 43/87 (49%)
 Frame = -2

Query: 265 EEALFFGLLERKVRIHKYDEIRNICCPSWQHVHNYNKSLAGRIWACWDPFFMSVQKISES 86
           E    FGL+E +V+    D +  +   SW  ++NY+ S  GRIW CW+   + V     S
Sbjct: 481 ERITLFGLVETRVKDKNKDNVSQLLLRSWSFLYNYDFSCRGRIWVCWNADTVKVDVFGMS 540

Query: 85  SQFIHCKVVYLSENEKIFLTVVYASNS 5
            + IH  V  L+ N     +++Y  N+
Sbjct: 541 DEAIHVSVTILATNISFNTSIIYGDNN 567



 Score = 23.1 bits (48), Expect(2) = 1e-08
 Identities = 9/35 (25%), Positives = 19/35 (54%)
 Frame = -3

Query: 360 TPLKMIAPLSIWNVRDTNDIHRAKEISKIRIEKKL 256
           TPL     +  WN+R  ND  +  E+ ++  ++++
Sbjct: 449 TPLYFPMIIGCWNIRGLNDPIKHSELHRLIHQERI 483


>gb|ABN08700.1| Endonuclease/exonuclease/phosphatase [Medicago truncatula]
          Length = 814

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 27/80 (33%), Positives = 49/80 (61%)
 Frame = -2

Query: 244 LLERKVRIHKYDEIRNICCPSWQHVHNYNKSLAGRIWACWDPFFMSVQKISESSQFIHCK 65
           L+E +++  K+++I ++    W  ++NY+ +  GRIW  W+P  + V+ I+ S+Q IHC+
Sbjct: 551 LVETRIKADKFNKISSMIFKRWPVLNNYDSAANGRIWVSWNPTVLDVKPIASSAQAIHCE 610

Query: 64  VVYLSENEKIFLTVVYASNS 5
           V  L+ +E      VYA N+
Sbjct: 611 VDNLTSSECFNFVAVYAFNT 630


>ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|222874875|gb|EEF12006.1|
           predicted protein [Populus trichocarpa]
          Length = 1386

 Score = 62.0 bits (149), Expect = 6e-08
 Identities = 28/87 (32%), Positives = 43/87 (49%)
 Frame = -2

Query: 265 EEALFFGLLERKVRIHKYDEIRNICCPSWQHVHNYNKSLAGRIWACWDPFFMSVQKISES 86
           E    FGL+E +V+    D +  +   SW  ++NY+ S  GRIW CW+   + V     S
Sbjct: 551 ERIALFGLVETRVKDKNKDNVTQLLLRSWSFLYNYDFSCRGRIWVCWNADTVKVDVFGMS 610

Query: 85  SQFIHCKVVYLSENEKIFLTVVYASNS 5
            Q IH  V  L+ N     +++Y  N+
Sbjct: 611 DQAIHVSVTILATNISFNTSIIYGDNN 637



 Score = 58.5 bits (140), Expect(2) = 7e-08
 Identities = 27/87 (31%), Positives = 42/87 (48%)
 Frame = -2

Query: 265  EEALFFGLLERKVRIHKYDEIRNICCPSWQHVHNYNKSLAGRIWACWDPFFMSVQKISES 86
            E    FGL+E +V+      +  +   SW  ++NY+ S  GRIW CW+   + V     S
Sbjct: 832  ERIALFGLVETRVKDKNKYNVTQLLLRSWSFLYNYDFSCRGRIWVCWNADTVKVDVFGMS 891

Query: 85   SQFIHCKVVYLSENEKIFLTVVYASNS 5
             Q IH  V  L+ N     +++Y  N+
Sbjct: 892  DQAIHVSVTILATNISFNTSIIYGDNN 918



 Score = 23.1 bits (48), Expect(2) = 7e-08
 Identities = 9/35 (25%), Positives = 19/35 (54%)
 Frame = -3

Query: 360 TPLKMIAPLSIWNVRDTNDIHRAKEISKIRIEKKL 256
           TPL     +  WN+R  ND  +  E+ ++  ++++
Sbjct: 800 TPLYFPMIIGCWNIRGLNDPIKHSELRRLIHQERI 834


>ref|XP_002331746.1| predicted protein [Populus trichocarpa] gi|222874272|gb|EEF11403.1|
           predicted protein [Populus trichocarpa]
          Length = 503

 Score = 62.0 bits (149), Expect = 6e-08
 Identities = 28/87 (32%), Positives = 43/87 (49%)
 Frame = -2

Query: 265 EEALFFGLLERKVRIHKYDEIRNICCPSWQHVHNYNKSLAGRIWACWDPFFMSVQKISES 86
           E    FGL+E +V+    D +  +   SW  ++NY+ S  GRIW CW+   + V     S
Sbjct: 11  ERIALFGLVETRVKDKNKDNVSQLLLRSWSFLYNYDFSCRGRIWVCWNADTVKVNVFGMS 70

Query: 85  SQFIHCKVVYLSENEKIFLTVVYASNS 5
            Q IH  V  L+ N     +++Y  N+
Sbjct: 71  DQAIHVSVTILATNISFNTSIIYGDNN 97


>ref|XP_002331745.1| predicted protein [Populus trichocarpa] gi|222874271|gb|EEF11402.1|
           predicted protein [Populus trichocarpa]
          Length = 317

 Score = 62.0 bits (149), Expect = 6e-08
 Identities = 28/87 (32%), Positives = 43/87 (49%)
 Frame = -2

Query: 265 EEALFFGLLERKVRIHKYDEIRNICCPSWQHVHNYNKSLAGRIWACWDPFFMSVQKISES 86
           E    FGL+E +V+    D +  +   SW  ++NY+ S  GRIW CW+   + V     S
Sbjct: 143 ERIALFGLVETRVKDKNKDNVSQLLLRSWSFLYNYDFSCRGRIWVCWNADTVKVDVFGMS 202

Query: 85  SQFIHCKVVYLSENEKIFLTVVYASNS 5
            Q IH  V  L+ N     +++Y  N+
Sbjct: 203 DQAIHVSVTILATNISFNTSIIYGDNN 229


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