BLASTX nr result

ID: Coptis24_contig00007700 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00007700
         (1785 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313033.1| predicted protein [Populus trichocarpa] gi|2...   785   0.0  
ref|XP_002283712.1| PREDICTED: diaminopimelate decarboxylase 2, ...   779   0.0  
ref|XP_002512941.1| diaminopimelate decarboxylase, putative [Ric...   779   0.0  
ref|XP_002275012.1| PREDICTED: diaminopimelate decarboxylase 2, ...   774   0.0  
ref|XP_004148832.1| PREDICTED: diaminopimelate decarboxylase 2, ...   773   0.0  

>ref|XP_002313033.1| predicted protein [Populus trichocarpa] gi|222849441|gb|EEE86988.1|
            predicted protein [Populus trichocarpa]
          Length = 482

 Score =  785 bits (2026), Expect = 0.0
 Identities = 381/442 (86%), Positives = 415/442 (93%), Gaps = 1/442 (0%)
 Frame = -1

Query: 1644 TVKAVLSESTQITKTTPNN-FDHCFKKYEDGYLYCESLKVQDILESLEKRPFYLYSKPQI 1468
            ++KAV+S+    T TT    F HCF K +DG+LYCESLKVQ+I+ES+EKRPFYLYSKPQI
Sbjct: 41   SLKAVISQQNPATATTQKTQFKHCFTKSQDGFLYCESLKVQEIMESVEKRPFYLYSKPQI 100

Query: 1467 TRNFDAYQEALQGLDSIIGYAIKANNNLKILEHLRSLGCGAVLVSGNELRLALRAGFDPT 1288
            TRN +AY++ALQGL SIIGYAIKANNNLKILEHLR LGCGAVLVSGNELRLALRAGFDPT
Sbjct: 101  TRNVEAYKDALQGLSSIIGYAIKANNNLKILEHLRGLGCGAVLVSGNELRLALRAGFDPT 160

Query: 1287 RCVFNGNGKLLEDLVLAAQEGVFVNVDSEFDLENIVTAARVTGKKINILLRINPDVDPQV 1108
            RC+FNGNGKLL+DLVLAAQEGVFVNVDSEFDLENIV AAR+ GKK+N+LLRINPDVDPQV
Sbjct: 161  RCIFNGNGKLLDDLVLAAQEGVFVNVDSEFDLENIVAAARIAGKKVNVLLRINPDVDPQV 220

Query: 1107 HAYVATGNKNSKFGIRNEKLQWFLNEVKAHPNELKLVGAHCHLGSTITKVDIFRDAAVLM 928
            H YVATGNKNSKFGIRNEKLQWFL+ VKAHPNELKLVGAHCHLGSTITKVDIFRDAA LM
Sbjct: 221  HPYVATGNKNSKFGIRNEKLQWFLDAVKAHPNELKLVGAHCHLGSTITKVDIFRDAAALM 280

Query: 927  VNYIDQIRAQGFEIEYLNIGGGLGIDYHHTGAVLPTPMDLINTVRELVISRNLHLIIEPG 748
            VNYID+IRAQGFE++YLNIGGGLGIDY+H+GAVLPTP DLI+TVRELV+SR+L+LIIEPG
Sbjct: 281  VNYIDEIRAQGFEVDYLNIGGGLGIDYYHSGAVLPTPRDLIDTVRELVLSRDLNLIIEPG 340

Query: 747  RSLIANTCCLVNRVTGVKTNGTKNFVVIDGSMAELIRPSLYGAYQHIELISPSMPDAEVS 568
            RSLIANTCCLVNRVTGVKTNGTKNFVVIDGSMAELIRPSLY AYQHIEL+SP+ P AEVS
Sbjct: 341  RSLIANTCCLVNRVTGVKTNGTKNFVVIDGSMAELIRPSLYDAYQHIELVSPASPSAEVS 400

Query: 567  TFDVVGPVCESADFLGKDRELPTPGKGAGLVVHDAGAYCMSMASTYNLKMRPPEYWVEED 388
            TFDVVGPVCESADFLGKDRELPTP KGAGLVVHDAGAYCMSMASTYNLKMRPPEYWVE+D
Sbjct: 401  TFDVVGPVCESADFLGKDRELPTPAKGAGLVVHDAGAYCMSMASTYNLKMRPPEYWVEDD 460

Query: 387  GSVEKIRHGETFDDYMRFFDGL 322
            GSV KIR GETF+D++RFF+GL
Sbjct: 461  GSVSKIRQGETFEDHIRFFEGL 482


>ref|XP_002283712.1| PREDICTED: diaminopimelate decarboxylase 2, chloroplastic isoform 1
            [Vitis vinifera]
          Length = 485

 Score =  779 bits (2012), Expect = 0.0
 Identities = 377/444 (84%), Positives = 415/444 (93%), Gaps = 3/444 (0%)
 Frame = -1

Query: 1644 TVKAVLSESTQITKTTP---NNFDHCFKKYEDGYLYCESLKVQDILESLEKRPFYLYSKP 1474
            T+KAVLS++   T T       F HCF+K EDG+LYCE L+VQD+++ +EKRPFYLYSKP
Sbjct: 42   TLKAVLSQNPAKTLTPDAQAQKFQHCFRKSEDGFLYCEGLRVQDVMDQVEKRPFYLYSKP 101

Query: 1473 QITRNFDAYQEALQGLDSIIGYAIKANNNLKILEHLRSLGCGAVLVSGNELRLALRAGFD 1294
            QITRNF+AY+EAL+GL SIIGYAIKANNNLKILEHLR LGCGAVLVSGNELRLALRAGFD
Sbjct: 102  QITRNFEAYKEALEGLRSIIGYAIKANNNLKILEHLRELGCGAVLVSGNELRLALRAGFD 161

Query: 1293 PTRCVFNGNGKLLEDLVLAAQEGVFVNVDSEFDLENIVTAARVTGKKINILLRINPDVDP 1114
            PTRC+FNGNGKLLEDLVLAAQEGVFVNVDSEFDL+NI++AAR+ GKK+N+LLRINPDVDP
Sbjct: 162  PTRCIFNGNGKLLEDLVLAAQEGVFVNVDSEFDLDNIISAARIAGKKVNVLLRINPDVDP 221

Query: 1113 QVHAYVATGNKNSKFGIRNEKLQWFLNEVKAHPNELKLVGAHCHLGSTITKVDIFRDAAV 934
            QVH YVATGNKNSKFGIRNEKLQWFL+ VKAHPNELKLVGAHCHLGSTITKVDIFRDAAV
Sbjct: 222  QVHPYVATGNKNSKFGIRNEKLQWFLDAVKAHPNELKLVGAHCHLGSTITKVDIFRDAAV 281

Query: 933  LMVNYIDQIRAQGFEIEYLNIGGGLGIDYHHTGAVLPTPMDLINTVRELVISRNLHLIIE 754
            LMVNYID+IRAQGFEI YLNIGGGLGIDY+H GAVLPTP DLI+TVRELV+SR+L+LIIE
Sbjct: 282  LMVNYIDEIRAQGFEISYLNIGGGLGIDYYHAGAVLPTPRDLIDTVRELVLSRDLNLIIE 341

Query: 753  PGRSLIANTCCLVNRVTGVKTNGTKNFVVIDGSMAELIRPSLYGAYQHIELISPSMPDAE 574
            PGRSLIANTCCLVNRVTGVKTNGTKNFVVIDGSMAELIRPSLY AYQHIEL+SP   DA+
Sbjct: 342  PGRSLIANTCCLVNRVTGVKTNGTKNFVVIDGSMAELIRPSLYDAYQHIELVSPPPSDAQ 401

Query: 573  VSTFDVVGPVCESADFLGKDRELPTPGKGAGLVVHDAGAYCMSMASTYNLKMRPPEYWVE 394
            +STFDVVGPVCESADFLGKDRELPTP +GAGLVVHDAGAYCMSMASTYNLKMRPPEYWVE
Sbjct: 402  ISTFDVVGPVCESADFLGKDRELPTPPRGAGLVVHDAGAYCMSMASTYNLKMRPPEYWVE 461

Query: 393  EDGSVEKIRHGETFDDYMRFFDGL 322
            +DGS+ KIRHGETF+D++R+F+GL
Sbjct: 462  DDGSMSKIRHGETFEDHVRYFEGL 485


>ref|XP_002512941.1| diaminopimelate decarboxylase, putative [Ricinus communis]
            gi|223547952|gb|EEF49444.1| diaminopimelate
            decarboxylase, putative [Ricinus communis]
          Length = 488

 Score =  779 bits (2011), Expect = 0.0
 Identities = 377/441 (85%), Positives = 413/441 (93%)
 Frame = -1

Query: 1644 TVKAVLSESTQITKTTPNNFDHCFKKYEDGYLYCESLKVQDILESLEKRPFYLYSKPQIT 1465
            T+KAVLS++  +T+ T   F HCF K  DG+LYCE+LKVQD++ES+EKRPFYLYSKPQIT
Sbjct: 49   TLKAVLSQNPTLTQETAQ-FKHCFTKSNDGFLYCENLKVQDVMESVEKRPFYLYSKPQIT 107

Query: 1464 RNFDAYQEALQGLDSIIGYAIKANNNLKILEHLRSLGCGAVLVSGNELRLALRAGFDPTR 1285
            RN +AY+ AL+GL+SIIGYAIKANNN KILEHLR LGCGAVLVSGNELRLALRAG+DP +
Sbjct: 108  RNVEAYKSALEGLNSIIGYAIKANNNFKILEHLRQLGCGAVLVSGNELRLALRAGYDPKK 167

Query: 1284 CVFNGNGKLLEDLVLAAQEGVFVNVDSEFDLENIVTAARVTGKKINILLRINPDVDPQVH 1105
            C+FNGNGKLLEDLVLAA+EGVFVNVDSEFDLENIV A+R+ G+KIN+LLRINPDVDPQVH
Sbjct: 168  CIFNGNGKLLEDLVLAAEEGVFVNVDSEFDLENIVAASRIAGEKINVLLRINPDVDPQVH 227

Query: 1104 AYVATGNKNSKFGIRNEKLQWFLNEVKAHPNELKLVGAHCHLGSTITKVDIFRDAAVLMV 925
             YVATGNKNSKFGIRNEKLQWFL+ VKAHPNELKLVGAHCHLGSTITKVDIFRDAAVLMV
Sbjct: 228  PYVATGNKNSKFGIRNEKLQWFLDAVKAHPNELKLVGAHCHLGSTITKVDIFRDAAVLMV 287

Query: 924  NYIDQIRAQGFEIEYLNIGGGLGIDYHHTGAVLPTPMDLINTVRELVISRNLHLIIEPGR 745
            NYID+IRAQGFEI+YLNIGGGLGIDY+H GAVLPTP DLI+TVRELV+SRNL+LIIEPGR
Sbjct: 288  NYIDEIRAQGFEIDYLNIGGGLGIDYYHAGAVLPTPRDLIDTVRELVLSRNLNLIIEPGR 347

Query: 744  SLIANTCCLVNRVTGVKTNGTKNFVVIDGSMAELIRPSLYGAYQHIELISPSMPDAEVST 565
            SLIANTCCLVNRVTGVKTNGTKNF+VIDGSMAELIRPSLY AYQHIEL+SP+ P  EVST
Sbjct: 348  SLIANTCCLVNRVTGVKTNGTKNFIVIDGSMAELIRPSLYDAYQHIELVSPAQPIVEVST 407

Query: 564  FDVVGPVCESADFLGKDRELPTPGKGAGLVVHDAGAYCMSMASTYNLKMRPPEYWVEEDG 385
            FDVVGPVCESADFLGK RELPTP KGAGLVVHDAGAYCMSMASTYNLKMRPPEYW+EEDG
Sbjct: 408  FDVVGPVCESADFLGKGRELPTPSKGAGLVVHDAGAYCMSMASTYNLKMRPPEYWIEEDG 467

Query: 384  SVEKIRHGETFDDYMRFFDGL 322
            SV KIRHGETF+D+MRFF+GL
Sbjct: 468  SVTKIRHGETFEDHMRFFEGL 488


>ref|XP_002275012.1| PREDICTED: diaminopimelate decarboxylase 2, chloroplastic-like [Vitis
            vinifera]
          Length = 564

 Score =  774 bits (1998), Expect = 0.0
 Identities = 375/444 (84%), Positives = 412/444 (92%), Gaps = 3/444 (0%)
 Frame = -1

Query: 1644 TVKAVLSESTQITKTTP---NNFDHCFKKYEDGYLYCESLKVQDILESLEKRPFYLYSKP 1474
            T+KAVLS++   T T       F HCF+K EDG+LYCE L+VQD++  +EKRPFYLYSKP
Sbjct: 121  TLKAVLSQNPAKTLTPDAQAKKFQHCFRKSEDGFLYCEGLRVQDVMNQVEKRPFYLYSKP 180

Query: 1473 QITRNFDAYQEALQGLDSIIGYAIKANNNLKILEHLRSLGCGAVLVSGNELRLALRAGFD 1294
            QI RNF+AY+EAL+GL SIIGYAIKANNNLKILEHLR LGCGAVLVSGNELRLALRAGFD
Sbjct: 181  QIARNFEAYREALEGLRSIIGYAIKANNNLKILEHLRELGCGAVLVSGNELRLALRAGFD 240

Query: 1293 PTRCVFNGNGKLLEDLVLAAQEGVFVNVDSEFDLENIVTAARVTGKKINILLRINPDVDP 1114
            PTRC+FNGNGKLLEDLVLAAQEGVFVNVDSEFDL+NI++AAR+ GKK+N+LLRINPDVDP
Sbjct: 241  PTRCIFNGNGKLLEDLVLAAQEGVFVNVDSEFDLDNIISAARIAGKKVNVLLRINPDVDP 300

Query: 1113 QVHAYVATGNKNSKFGIRNEKLQWFLNEVKAHPNELKLVGAHCHLGSTITKVDIFRDAAV 934
            QVH YVATGNKNSKFGIRNEKLQWFL+ VKAHPNELKLVGAHCHLGSTITKVDIFRDAAV
Sbjct: 301  QVHPYVATGNKNSKFGIRNEKLQWFLDAVKAHPNELKLVGAHCHLGSTITKVDIFRDAAV 360

Query: 933  LMVNYIDQIRAQGFEIEYLNIGGGLGIDYHHTGAVLPTPMDLINTVRELVISRNLHLIIE 754
            LMVNYID+IRAQGFEI YLNIGGGLGIDY+H GAVLPTP DLI+TVRELV+SR+L+LIIE
Sbjct: 361  LMVNYIDEIRAQGFEISYLNIGGGLGIDYYHAGAVLPTPRDLIDTVRELVLSRDLNLIIE 420

Query: 753  PGRSLIANTCCLVNRVTGVKTNGTKNFVVIDGSMAELIRPSLYGAYQHIELISPSMPDAE 574
            PGRSLIANTCCLVNRV GVKTNGTKNFVVIDGSMAELIRPSLY AYQHIEL+SP   DA+
Sbjct: 421  PGRSLIANTCCLVNRVIGVKTNGTKNFVVIDGSMAELIRPSLYDAYQHIELVSPPPSDAQ 480

Query: 573  VSTFDVVGPVCESADFLGKDRELPTPGKGAGLVVHDAGAYCMSMASTYNLKMRPPEYWVE 394
            +STFDVVGPVCESADFLGKDRELPTP +GAGLVVHDAGAYCMSMAS+YNLKMRPPEYWVE
Sbjct: 481  ISTFDVVGPVCESADFLGKDRELPTPPRGAGLVVHDAGAYCMSMASSYNLKMRPPEYWVE 540

Query: 393  EDGSVEKIRHGETFDDYMRFFDGL 322
            +DGSV KIRHGETF+D++R+F+GL
Sbjct: 541  DDGSVSKIRHGETFEDHVRYFEGL 564


>ref|XP_004148832.1| PREDICTED: diaminopimelate decarboxylase 2, chloroplastic-like
            [Cucumis sativus] gi|449524272|ref|XP_004169147.1|
            PREDICTED: diaminopimelate decarboxylase 2,
            chloroplastic-like [Cucumis sativus]
          Length = 482

 Score =  773 bits (1996), Expect = 0.0
 Identities = 371/441 (84%), Positives = 412/441 (93%)
 Frame = -1

Query: 1644 TVKAVLSESTQITKTTPNNFDHCFKKYEDGYLYCESLKVQDILESLEKRPFYLYSKPQIT 1465
            ++KAVLS++   T+T    F HCF K  DG+LYCE +KVQDI+ES++KRPFYLYSKPQIT
Sbjct: 45   SLKAVLSQNPSKTQT---QFQHCFSKSSDGFLYCEGIKVQDIMESVDKRPFYLYSKPQIT 101

Query: 1464 RNFDAYQEALQGLDSIIGYAIKANNNLKILEHLRSLGCGAVLVSGNELRLALRAGFDPTR 1285
            RN +AY+EAL+GL+SIIGYAIKANNNLK+LEHLR LGCGAVLVSGNELRLAL AGFDPTR
Sbjct: 102  RNVEAYKEALEGLNSIIGYAIKANNNLKVLEHLRKLGCGAVLVSGNELRLALHAGFDPTR 161

Query: 1284 CVFNGNGKLLEDLVLAAQEGVFVNVDSEFDLENIVTAARVTGKKINILLRINPDVDPQVH 1105
            C+FNGNGKLLEDLVLAA++GVFVNVDSEFDL+NIV AAR+  KK+N+LLRINPDVDPQVH
Sbjct: 162  CIFNGNGKLLEDLVLAAEQGVFVNVDSEFDLDNIVAAARIARKKVNVLLRINPDVDPQVH 221

Query: 1104 AYVATGNKNSKFGIRNEKLQWFLNEVKAHPNELKLVGAHCHLGSTITKVDIFRDAAVLMV 925
             YVATGNKNSKFGIRNEKLQWFL+ VKAHP+ELKLVGAHCHLGSTITKVDIFRDAAVLMV
Sbjct: 222  PYVATGNKNSKFGIRNEKLQWFLDAVKAHPDELKLVGAHCHLGSTITKVDIFRDAAVLMV 281

Query: 924  NYIDQIRAQGFEIEYLNIGGGLGIDYHHTGAVLPTPMDLINTVRELVISRNLHLIIEPGR 745
            NYID+IR QGFE++YLNIGGGLGIDY+H GA+LPTP DLINTVRELV+SRNL+LIIEPGR
Sbjct: 282  NYIDEIRDQGFEVDYLNIGGGLGIDYYHAGAILPTPRDLINTVRELVLSRNLNLIIEPGR 341

Query: 744  SLIANTCCLVNRVTGVKTNGTKNFVVIDGSMAELIRPSLYGAYQHIELISPSMPDAEVST 565
            S+IANTCCLVNRVTGVKTNGTKNF+VIDGSMAELIRPSLY AYQHIEL++P+ PD+E+ST
Sbjct: 342  SVIANTCCLVNRVTGVKTNGTKNFIVIDGSMAELIRPSLYDAYQHIELVAPTPPDSEIST 401

Query: 564  FDVVGPVCESADFLGKDRELPTPGKGAGLVVHDAGAYCMSMASTYNLKMRPPEYWVEEDG 385
            FDVVGPVCESADFLGK RELPTP KGAGLVVHDAGAYCMSMASTYNLKMRPPEYWVEEDG
Sbjct: 402  FDVVGPVCESADFLGKQRELPTPPKGAGLVVHDAGAYCMSMASTYNLKMRPPEYWVEEDG 461

Query: 384  SVEKIRHGETFDDYMRFFDGL 322
            SV KIRHGETFDD++RFF+ L
Sbjct: 462  SVSKIRHGETFDDHLRFFENL 482


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