BLASTX nr result

ID: Coptis24_contig00007691 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00007691
         (409 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002323541.1| predicted protein [Populus trichocarpa] gi|2...   120   9e-26
ref|NP_001176770.1| Os12g0127400 [Oryza sativa Japonica Group] g...    78   9e-13
gb|EAY82142.1| hypothetical protein OsI_37336 [Oryza sativa Indi...    78   9e-13
ref|NP_001176331.1| Os11g0130500 [Oryza sativa Japonica Group] g...    75   7e-12
emb|CAN81149.1| hypothetical protein VITISV_020815 [Vitis vinifera]    67   2e-09

>ref|XP_002323541.1| predicted protein [Populus trichocarpa] gi|222868171|gb|EEF05302.1|
           predicted protein [Populus trichocarpa]
          Length = 426

 Score =  120 bits (302), Expect = 9e-26
 Identities = 60/135 (44%), Positives = 82/135 (60%)
 Frame = +1

Query: 1   LSSSTGNVYFDLRTLFGINYDRNYLSKNSNSLWEGKYRFINAVDQIMQLYRSPKLYSFKI 180
           LS    ++ FD+ TLFG +              E   +F+ AVDQ++   R PK+ + K+
Sbjct: 38  LSPPLSHLQFDVFTLFGTH-------------GESSSKFVTAVDQVLLACRGPKIGTVKV 84

Query: 181 CYCLGNESASHIDRWISFALRMQVEKIDLEFPCIPGGCENYKFPCHLLPHGKASHLKHLS 360
            + LG++ A H+DRW+SF+  MQVEKI  +F C P  C +Y FPCH+LP  KASHLKHL 
Sbjct: 85  RFGLGDDHAFHVDRWVSFSSAMQVEKIAFDFSCSPKSCGSYNFPCHILPADKASHLKHLC 144

Query: 361 LQSCVLSPSPDFTNR 405
           L SC L  SP FT++
Sbjct: 145 LVSCTLRLSPKFTSQ 159


>ref|NP_001176770.1| Os12g0127400 [Oryza sativa Japonica Group]
           gi|77553566|gb|ABA96362.1| F-box domain containing
           protein, expressed [Oryza sativa Japonica Group]
           gi|125578377|gb|EAZ19523.1| hypothetical protein
           OsJ_35088 [Oryza sativa Japonica Group]
           gi|255670007|dbj|BAH95498.1| Os12g0127400 [Oryza sativa
           Japonica Group]
          Length = 358

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 42/127 (33%), Positives = 66/127 (51%), Gaps = 1/127 (0%)
 Frame = +1

Query: 19  NVYFDLRTLFGINYDRNYLSKNSNSLWEGKYRFINAVDQIMQLYRSPKLYSFKICYCLGN 198
           N+YF ++T+ G N  R   S + N       +FI  VD I++ +    +  F + + L N
Sbjct: 100 NLYFGIKTVLGNNAKRKGTSSDLNCRISSANKFIKRVDAILEKHCGTMVNKFAVKFGLSN 159

Query: 199 ESASHIDRWISFALRMQVEKIDLEF-PCIPGGCENYKFPCHLLPHGKASHLKHLSLQSCV 375
           E A+H++ W++FA+  +   I L+F P       NY FPCH+      S+L+ L L S  
Sbjct: 160 EHANHVNGWVAFAIASKARVIILDFSPDWKSHENNYDFPCHIFDKHNGSYLEALRLDSVT 219

Query: 376 LSPSPDF 396
           L+P  DF
Sbjct: 220 LNPPLDF 226


>gb|EAY82142.1| hypothetical protein OsI_37336 [Oryza sativa Indica Group]
          Length = 446

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 42/127 (33%), Positives = 66/127 (51%), Gaps = 1/127 (0%)
 Frame = +1

Query: 19  NVYFDLRTLFGINYDRNYLSKNSNSLWEGKYRFINAVDQIMQLYRSPKLYSFKICYCLGN 198
           N+YF ++T+ G N  R   S + N       +FI  VD I++ +    +  F + + L N
Sbjct: 100 NLYFGIKTVLGNNAKRKGTSSDLNCRISSANKFIKRVDAILEKHCGTMVNKFAVKFGLSN 159

Query: 199 ESASHIDRWISFALRMQVEKIDLEF-PCIPGGCENYKFPCHLLPHGKASHLKHLSLQSCV 375
           E A+H++ W++FA+  +   I L+F P       NY FPCH+      S+L+ L L S  
Sbjct: 160 EHANHVNGWVAFAIASKARVIILDFSPDWKSHENNYDFPCHIFDKHNGSYLEALRLDSVT 219

Query: 376 LSPSPDF 396
           L+P  DF
Sbjct: 220 LNPPLDF 226


>ref|NP_001176331.1| Os11g0130500 [Oryza sativa Japonica Group]
           gi|255679751|dbj|BAH95059.1| Os11g0130500 [Oryza sativa
           Japonica Group]
          Length = 244

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 42/127 (33%), Positives = 65/127 (51%), Gaps = 1/127 (0%)
 Frame = +1

Query: 19  NVYFDLRTLFGINYDRNYLSKNSNSLWEGKYRFINAVDQIMQLYRSPKLYSFKICYCLGN 198
           N+YF ++T  G N  R   S + N       +FI  VD I++ +    +  F + + L N
Sbjct: 100 NLYFGIKTALGNNAKRKGTSSDLNCRISSGNKFIKRVDAILEKHCGTMVNKFAVKFGLSN 159

Query: 199 ESASHIDRWISFALRMQVEKIDLEFPCIPGGCEN-YKFPCHLLPHGKASHLKHLSLQSCV 375
           E A+H++ W++FA+  +   I L+F       EN Y FPCH+      S+L+ L L S  
Sbjct: 160 EHANHVNGWVAFAIASKARVIILDFSPDWKSHENKYDFPCHIFDKHNGSYLEALRLDSVT 219

Query: 376 LSPSPDF 396
           L+P  DF
Sbjct: 220 LNPPLDF 226


>emb|CAN81149.1| hypothetical protein VITISV_020815 [Vitis vinifera]
          Length = 1789

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 52/140 (37%), Positives = 70/140 (50%), Gaps = 17/140 (12%)
 Frame = +1

Query: 22   VYFDLRTLFGINYDRNYLSKNSNSLWEG--KYRFINAVDQIMQLYRS--PKLYSFKICYC 189
            ++FD  ++ GI      +S N   L       +F+  VDQ M  YRS  PK+ SF I + 
Sbjct: 1360 LWFDAASVLGIGDCSXSMSGNQPELNSQMQSXKFVERVDQFMY-YRSQGPKINSFSIHFP 1418

Query: 190  LGNESASHIDRWISFALRMQVEKIDLEF-----------PCIPGGCENYKFPCHL--LPH 330
            LG E  SHID+WI+ A+   VE IDL+                   + Y+FPC L  +P 
Sbjct: 1419 LGKEFMSHIDQWITCAVMKGVENIDLDLSEYFSFNLKRDDTSSTAFQIYEFPCRLFSVPG 1478

Query: 331  GKASHLKHLSLQSCVLSPSP 390
            G+ + LKHL L SC LS  P
Sbjct: 1479 GRCT-LKHLRLASCHLSALP 1497


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