BLASTX nr result

ID: Coptis24_contig00007679 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00007679
         (1477 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274500.1| PREDICTED: ABC transporter I family member 1...   350   7e-94
ref|XP_004138625.1| PREDICTED: ABC transporter I family member 1...   338   2e-90
ref|XP_003622165.1| ABC transporter I family member [Medicago tr...   338   2e-90
ref|XP_002328881.1| predicted protein [Populus trichocarpa] gi|2...   334   4e-89
ref|XP_003553946.1| PREDICTED: ABC transporter I family member 1...   332   2e-88

>ref|XP_002274500.1| PREDICTED: ABC transporter I family member 11, chloroplastic [Vitis
            vinifera] gi|296082322|emb|CBI21327.3| unnamed protein
            product [Vitis vinifera]
          Length = 284

 Score =  350 bits (897), Expect = 7e-94
 Identities = 179/251 (71%), Positives = 205/251 (81%)
 Frame = -3

Query: 1274 SIFPRIKRFNFANPRPLNITSDYSCFEVKGVSYRPPGTQLNLLSDVHFSLHEKSLGLIFG 1095
            +I  R  R  F   R L I+ +YSC EV+GVSYRP GT+ +LL+DV+FSL EKS GLIFG
Sbjct: 32   AILTRPCRSKFWRIRNLRISCEYSCIEVRGVSYRPQGTEFDLLNDVNFSLPEKSFGLIFG 91

Query: 1094 RSGSGKTTLLQLLAGLSKPTSGTINIQRYGEDGKPNQAPIQLPPERVGIVFQFPERYFLA 915
            RSGSGKTTLLQLLAG++KPTSG+I +Q+YG+DGK  Q    LP ERVGI+FQFPERYF+A
Sbjct: 92   RSGSGKTTLLQLLAGINKPTSGSIFVQKYGDDGKLTQTSEPLPSERVGILFQFPERYFVA 151

Query: 914  DTVLEEVTFGWPRQRENIHLKEQLASGLQRAINSVGLNGISLDEDPHALSGGYKRRLALA 735
            D VLEEVTFGWPRQR +  LKE LA GL+RAIN VGLNGISLD+DPH+LSGGYKRRLALA
Sbjct: 152  DNVLEEVTFGWPRQRGSFQLKEHLALGLERAINWVGLNGISLDKDPHSLSGGYKRRLALA 211

Query: 734  IQLVKFPDLLILDEPLAGLDWKARADVVXXXXXXXXXXXXLVVSHDLKELSCLVDQSWRM 555
            IQLV+ PDLLILDEPLAGLDWKARADVV            LVVSHDLKEL+ LVD+SWRM
Sbjct: 212  IQLVQIPDLLILDEPLAGLDWKARADVVELLKHLKKELTILVVSHDLKELAALVDRSWRM 271

Query: 554  EMGGLLKKEPM 522
            EMGG+LK+EP+
Sbjct: 272  EMGGVLKEEPI 282


>ref|XP_004138625.1| PREDICTED: ABC transporter I family member 11, chloroplastic-like
            [Cucumis sativus]
          Length = 274

 Score =  338 bits (868), Expect = 2e-90
 Identities = 171/244 (70%), Positives = 198/244 (81%)
 Frame = -3

Query: 1247 NFANPRPLNITSDYSCFEVKGVSYRPPGTQLNLLSDVHFSLHEKSLGLIFGRSGSGKTTL 1068
            N      L + S+YSCFEV+ +SYRPPGT+ +LL+ V+FSL EKS GLIFG+SGSGKTTL
Sbjct: 31   NSRRTNALTLKSNYSCFEVRDLSYRPPGTEHSLLNAVNFSLREKSFGLIFGQSGSGKTTL 90

Query: 1067 LQLLAGLSKPTSGTINIQRYGEDGKPNQAPIQLPPERVGIVFQFPERYFLADTVLEEVTF 888
            LQLLAGLSKPTSG+I +Q+Y +DGKP Q+   L PERVGIVFQFPERYF+ D+VL EVTF
Sbjct: 91   LQLLAGLSKPTSGSICVQKYDKDGKPCQSSQPLTPERVGIVFQFPERYFITDSVLNEVTF 150

Query: 887  GWPRQRENIHLKEQLASGLQRAINSVGLNGISLDEDPHALSGGYKRRLALAIQLVKFPDL 708
            GWPRQR +  LKE LA  LQRAIN VGLNGI+LD+DPH+LSGGYKRRLALAIQLV+ PDL
Sbjct: 151  GWPRQRSDSDLKENLALRLQRAINWVGLNGIALDKDPHSLSGGYKRRLALAIQLVQIPDL 210

Query: 707  LILDEPLAGLDWKARADVVXXXXXXXXXXXXLVVSHDLKELSCLVDQSWRMEMGGLLKKE 528
            LILDEPLAGLDWKAR DVV            L+VSHDLKE + LVD SWRMEMGG+L++E
Sbjct: 211  LILDEPLAGLDWKARTDVVKLLKNLKKELTVLIVSHDLKEFAGLVDNSWRMEMGGVLREE 270

Query: 527  PMPI 516
            P+PI
Sbjct: 271  PLPI 274


>ref|XP_003622165.1| ABC transporter I family member [Medicago truncatula]
            gi|355497180|gb|AES78383.1| ABC transporter I family
            member [Medicago truncatula]
          Length = 280

 Score =  338 bits (868), Expect = 2e-90
 Identities = 180/267 (67%), Positives = 212/267 (79%), Gaps = 2/267 (0%)
 Frame = -3

Query: 1310 LAPPLNSLTTSLSIFPR--IKRFNFANPRPLNITSDYSCFEVKGVSYRPPGTQLNLLSDV 1137
            L PPL+S   SLS  P+     FN +  R       YS  EV+ VSY+PPGT+  LL+ V
Sbjct: 20   LKPPLSSFP-SLSRSPQSHCSFFNSSTTR-----CSYSSLEVRDVSYQPPGTEFKLLNSV 73

Query: 1136 HFSLHEKSLGLIFGRSGSGKTTLLQLLAGLSKPTSGTINIQRYGEDGKPNQAPIQLPPER 957
            +FSL EKSLGLIFG+SGSGKTTLLQLLAG++KPTSG+I+IQ+YG+DG P+Q+P  L PER
Sbjct: 74   NFSLPEKSLGLIFGQSGSGKTTLLQLLAGINKPTSGSIHIQKYGDDGSPSQSPEPLVPER 133

Query: 956  VGIVFQFPERYFLADTVLEEVTFGWPRQRENIHLKEQLASGLQRAINSVGLNGISLDEDP 777
            VGIVFQFPERYF+ADTVL+EVTFGWPRQ+ N  L+E LA GLQRAIN VGL+GISLD++P
Sbjct: 134  VGIVFQFPERYFVADTVLDEVTFGWPRQKGNDQLRENLALGLQRAINWVGLSGISLDKNP 193

Query: 776  HALSGGYKRRLALAIQLVKFPDLLILDEPLAGLDWKARADVVXXXXXXXXXXXXLVVSHD 597
            H+LSGGYKRRLALAIQLV+ PDLLILDEPLAGLDWKARADVV            LVVSHD
Sbjct: 194  HSLSGGYKRRLALAIQLVQIPDLLILDEPLAGLDWKARADVVKLLKHLKKELTVLVVSHD 253

Query: 596  LKELSCLVDQSWRMEMGGLLKKEPMPI 516
            L+E + LVDQSWRMEMGG L++E +P+
Sbjct: 254  LREFASLVDQSWRMEMGGNLRQEFLPL 280


>ref|XP_002328881.1| predicted protein [Populus trichocarpa] gi|222839311|gb|EEE77648.1|
            predicted protein [Populus trichocarpa]
          Length = 234

 Score =  334 bits (856), Expect = 4e-89
 Identities = 165/226 (73%), Positives = 191/226 (84%)
 Frame = -3

Query: 1193 VKGVSYRPPGTQLNLLSDVHFSLHEKSLGLIFGRSGSGKTTLLQLLAGLSKPTSGTINIQ 1014
            VK VSYRPPGT+LNLL+ V FSL E+S GLIFG+SGSGKTTLLQLL+G+SKPTSG+I +Q
Sbjct: 9    VKDVSYRPPGTELNLLNKVTFSLPERSFGLIFGQSGSGKTTLLQLLSGISKPTSGSICVQ 68

Query: 1013 RYGEDGKPNQAPIQLPPERVGIVFQFPERYFLADTVLEEVTFGWPRQRENIHLKEQLASG 834
            RYG DG PNQ P QL PE+VGIVFQFPERYF+ADT+ +EVTFGWPR++ ++ L+E LA  
Sbjct: 69   RYGNDGNPNQLPEQLSPEKVGIVFQFPERYFVADTIADEVTFGWPRRKSSVQLREHLALN 128

Query: 833  LQRAINSVGLNGISLDEDPHALSGGYKRRLALAIQLVKFPDLLILDEPLAGLDWKARADV 654
            LQRA+N VGLNGISLD+DPH+LSGGYKRRLALAIQLV+ PDLLILDEPLAGLDWKARADV
Sbjct: 129  LQRAVNWVGLNGISLDKDPHSLSGGYKRRLALAIQLVEVPDLLILDEPLAGLDWKARADV 188

Query: 653  VXXXXXXXXXXXXLVVSHDLKELSCLVDQSWRMEMGGLLKKEPMPI 516
            V            LVVSHDLKEL+ LVD SWRMEMGG L++E +P+
Sbjct: 189  VKLLKHLKKELTILVVSHDLKELAALVDHSWRMEMGGFLREELLPV 234


>ref|XP_003553946.1| PREDICTED: ABC transporter I family member 11, chloroplastic-like
            [Glycine max]
          Length = 272

 Score =  332 bits (850), Expect = 2e-88
 Identities = 169/235 (71%), Positives = 195/235 (82%)
 Frame = -3

Query: 1220 ITSDYSCFEVKGVSYRPPGTQLNLLSDVHFSLHEKSLGLIFGRSGSGKTTLLQLLAGLSK 1041
            I S+YS FEV+ V+Y+PPGTQL LL+ V FSL EKS GLIFG+SGSGKTTLLQLLAG+SK
Sbjct: 38   INSNYSSFEVRDVTYQPPGTQLRLLNSVSFSLPEKSFGLIFGQSGSGKTTLLQLLAGISK 97

Query: 1040 PTSGTINIQRYGEDGKPNQAPIQLPPERVGIVFQFPERYFLADTVLEEVTFGWPRQRENI 861
            PTSG+I IQ Y  DG P+Q P  L PERVGIVFQFPERYF+AD VL+EVTFGWPRQ+ N 
Sbjct: 98   PTSGSIYIQEYESDGNPSQPPEPLVPERVGIVFQFPERYFVADNVLDEVTFGWPRQKGNH 157

Query: 860  HLKEQLASGLQRAINSVGLNGISLDEDPHALSGGYKRRLALAIQLVKFPDLLILDEPLAG 681
            HL+E LA GLQRAIN VGL+GISL+++PH+LSGGYKRRLALAIQLV+ PDLLILDEPLAG
Sbjct: 158  HLRENLALGLQRAINWVGLSGISLNKNPHSLSGGYKRRLALAIQLVQTPDLLILDEPLAG 217

Query: 680  LDWKARADVVXXXXXXXXXXXXLVVSHDLKELSCLVDQSWRMEMGGLLKKEPMPI 516
            LDWKARADVV            LVVSHDL+E + LVD+SWRMEMGG L++E +P+
Sbjct: 218  LDWKARADVVKLLKHLKKELTVLVVSHDLREFASLVDRSWRMEMGGNLREEFLPL 272


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