BLASTX nr result

ID: Coptis24_contig00007677 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00007677
         (1223 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274696.1| PREDICTED: uncharacterized protein LOC100244...   463   e-128
ref|XP_004150751.1| PREDICTED: uncharacterized protein LOC101204...   450   e-124
emb|CBI28859.3| unnamed protein product [Vitis vinifera]              438   e-120
ref|XP_002302863.1| predicted protein [Populus trichocarpa] gi|2...   436   e-120
ref|XP_002881256.1| hypothetical protein ARALYDRAFT_345055 [Arab...   434   e-119

>ref|XP_002274696.1| PREDICTED: uncharacterized protein LOC100244748 [Vitis vinifera]
          Length = 300

 Score =  463 bits (1191), Expect = e-128
 Identities = 239/301 (79%), Positives = 267/301 (88%), Gaps = 5/301 (1%)
 Frame = +3

Query: 279  MSLGSDTTWVGKKPLRRLGGMSDALSIASDLGFILPPPPTQEDLQNLATTTGDKSDDLIR 458
            MS+GSDT+WVGKKPLRRLGGMSDALSIA+DLGF + PPP+QE+LQNL++T G+K DDLIR
Sbjct: 1    MSMGSDTSWVGKKPLRRLGGMSDALSIAADLGFSVNPPPSQEELQNLSST-GEKGDDLIR 59

Query: 459  VLRELTTAQRKIADLQVELQGRKDDKNVAYLTHVSEMEKKCETLARITSILKDVIQNKDR 638
            VLRELTT QRKIADLQVELQGRK+DKNVA+LTHVSEMEKKCETLARIT+ILKDVIQNKDR
Sbjct: 60   VLRELTTVQRKIADLQVELQGRKEDKNVAHLTHVSEMEKKCETLARITAILKDVIQNKDR 119

Query: 639  IIARLQQPYSLDCIPVEAEYQKQFSELLFKAASDYGALTASVADFQWSQNFKEPPTVWGE 818
            IIARLQQPYSLDCIPVEAE+QKQFSELL KAASDYGALTASVADFQW+QNFKEPP+VWGE
Sbjct: 120  IIARLQQPYSLDCIPVEAEFQKQFSELLMKAASDYGALTASVADFQWTQNFKEPPSVWGE 179

Query: 819  MLRPIPVALASCTRFFEAMSATRETFATLQNLRVGHSSYSTTTTPANDPSRGVLGDSDCV 998
            MLRPIPVALASCTRFFEAMSA RE+FATLQNLRVG+S+ S  TTPA DP + + GDS+CV
Sbjct: 180  MLRPIPVALASCTRFFEAMSAMRESFATLQNLRVGNSASSLPTTPAKDPYQRIPGDSECV 239

Query: 999  TPPQ-RKGSNFDDLVMRNWKNQEMESQ---DENSEVSGL-QSESMSQRRLSWPPSVKKNG 1163
            TPP  R   +FDDL +R+ + QE E Q   DENSEV  L Q +  S RRLSWPPSVKK+G
Sbjct: 240  TPPPWRNEPSFDDLAVRSVRRQENERQEVEDENSEVGELNQVDGTSHRRLSWPPSVKKSG 299

Query: 1164 L 1166
            +
Sbjct: 300  M 300


>ref|XP_004150751.1| PREDICTED: uncharacterized protein LOC101204893 [Cucumis sativus]
          Length = 301

 Score =  450 bits (1158), Expect = e-124
 Identities = 231/301 (76%), Positives = 259/301 (86%), Gaps = 5/301 (1%)
 Frame = +3

Query: 279  MSLGSDTTWVGKKPLRRLGGMSDALSIASDLGFILPPPPTQEDLQNLATTTGDKSDDLIR 458
            MS+GSDTTWVGKKPLRR+GGMSDALSIA+DLGF + PPP+QE+LQN+++  G+K DDLIR
Sbjct: 1    MSMGSDTTWVGKKPLRRIGGMSDALSIAADLGFSVSPPPSQEELQNISSAIGEKGDDLIR 60

Query: 459  VLRELTTAQRKIADLQVELQGRKDDKNVAYLTHVSEMEKKCETLARITSILKDVIQNKDR 638
            VLRELT  QRKIADLQVELQGRKDDKNVA+LTHVSEMEKK ETL+RIT+ILKDVIQNKDR
Sbjct: 61   VLRELTAVQRKIADLQVELQGRKDDKNVAHLTHVSEMEKKIETLSRITTILKDVIQNKDR 120

Query: 639  IIARLQQPYSLDCIPVEAEYQKQFSELLFKAASDYGALTASVADFQWSQNFKEPPTVWGE 818
            IIARLQQPYSLDCIPVEAEYQKQFSELL KAASDYGALTASVADFQWSQNFKE P+VWGE
Sbjct: 121  IIARLQQPYSLDCIPVEAEYQKQFSELLMKAASDYGALTASVADFQWSQNFKESPSVWGE 180

Query: 819  MLRPIPVALASCTRFFEAMSATRETFATLQNLRVGHSSYSTTTTPANDPSRGVLGDSDCV 998
            MLRPIPVALASCTRFFEAMSA RE+FATLQNLRVG+ + S  TTP  DPS  V  +SDC+
Sbjct: 181  MLRPIPVALASCTRFFEAMSAMRESFATLQNLRVGNPNPSLPTTPPIDPSLRVASESDCI 240

Query: 999  TPPQ-RKGSNFDDLVMRNWKNQE---MESQDENSEVSGL-QSESMSQRRLSWPPSVKKNG 1163
            TPP  R  S+FDDL +R    QE    ++ DE+SE   L Q +  SQRRLSWPPS+KK+G
Sbjct: 241  TPPPWRSDSSFDDLAIRTLHRQENGQQQAGDEHSEQDELNQVDGSSQRRLSWPPSIKKSG 300

Query: 1164 L 1166
            +
Sbjct: 301  I 301


>emb|CBI28859.3| unnamed protein product [Vitis vinifera]
          Length = 274

 Score =  438 bits (1127), Expect = e-120
 Identities = 226/297 (76%), Positives = 252/297 (84%), Gaps = 1/297 (0%)
 Frame = +3

Query: 279  MSLGSDTTWVGKKPLRRLGGMSDALSIASDLGFILPPPPTQEDLQNLATTTGDKSDDLIR 458
            MS+GSDT+WVGKKPLRRLGGMSDALSIA+DLGF + PPP+QE+LQNL++T G+K DDLIR
Sbjct: 1    MSMGSDTSWVGKKPLRRLGGMSDALSIAADLGFSVNPPPSQEELQNLSST-GEKGDDLIR 59

Query: 459  VLRELTTAQRKIADLQVELQGRKDDKNVAYLTHVSEMEKKCETLARITSILKDVIQNKDR 638
            VLRELTT QRKIADLQVELQGRK+DKNVA+LTHVSEMEKKCETLARIT+ILKDVIQNKDR
Sbjct: 60   VLRELTTVQRKIADLQVELQGRKEDKNVAHLTHVSEMEKKCETLARITAILKDVIQNKDR 119

Query: 639  IIARLQQPYSLDCIPVEAEYQKQFSELLFKAASDYGALTASVADFQWSQNFKEPPTVWGE 818
            IIARLQQPYSLDCIPVEAE+QKQFSELL KAASDYGALTASVADFQW+QNFKEPP+VWGE
Sbjct: 120  IIARLQQPYSLDCIPVEAEFQKQFSELLMKAASDYGALTASVADFQWTQNFKEPPSVWGE 179

Query: 819  MLRPIPVALASCTRFFEAMSATRETFATLQNLRVGHSSYSTTTTPANDPSRGVLGDSDCV 998
            MLRPIPVALASCTRFFEAMSA RE+FATLQNLRVG+S+ S  TTPA DP + + GDS+CV
Sbjct: 180  MLRPIPVALASCTRFFEAMSAMRESFATLQNLRVGNSASSLPTTPAKDPYQRIPGDSECV 239

Query: 999  TPPQ-RKGSNFDDLVMRNWKNQEMESQDENSEVSGLQSESMSQRRLSWPPSVKKNGL 1166
            TPP  R   +FDDL +                      +  S RRLSWPPSVKK+G+
Sbjct: 240  TPPPWRNEPSFDDLAV----------------------DGTSHRRLSWPPSVKKSGM 274


>ref|XP_002302863.1| predicted protein [Populus trichocarpa] gi|222844589|gb|EEE82136.1|
            predicted protein [Populus trichocarpa]
          Length = 292

 Score =  436 bits (1122), Expect = e-120
 Identities = 224/300 (74%), Positives = 252/300 (84%), Gaps = 4/300 (1%)
 Frame = +3

Query: 279  MSLGSDTTWVGKKPLRRLGGMSDALSIASDLGFILPPPPTQEDLQNLATTTGDKSDDLIR 458
            MS+G DTTWVGKKP+RR+GGM+DALSIA+DLGF + PPP+QE+LQNL+T +G+K DDLIR
Sbjct: 1    MSMGCDTTWVGKKPIRRIGGMADALSIAADLGFSVAPPPSQEELQNLSTASGEKGDDLIR 60

Query: 459  VLRELTTAQRKIADLQVELQGRKDDKNVAYLTHVSEMEKKCETLARITSILKDVIQNKDR 638
            VLRELT  QRKIADLQVELQGRKDDKNVA+LTHVSEMEKK +TL+RIT+ILKDVIQNKDR
Sbjct: 61   VLRELTAVQRKIADLQVELQGRKDDKNVAHLTHVSEMEKKIDTLSRITTILKDVIQNKDR 120

Query: 639  IIARLQQPYSLDCIPVEAEYQKQFSELLFKAASDYGALTASVADFQWSQNFKEPPTVWGE 818
            IIARLQQPYSLDCIPVEAEYQKQFSELL KAASDYGALTAS ADFQWSQNFKE P+VWGE
Sbjct: 121  IIARLQQPYSLDCIPVEAEYQKQFSELLMKAASDYGALTASAADFQWSQNFKESPSVWGE 180

Query: 819  MLRPIPVALASCTRFFEAMSATRETFATLQNLRVGHSSYSTTTTPANDPSRGVLGDSDCV 998
            MLRPIPVALASCTRFFEAMSA RE+FATLQ+LRVGH           D S+   GDSD  
Sbjct: 181  MLRPIPVALASCTRFFEAMSAMRESFATLQDLRVGHL--------GKDSSQRAFGDSDFA 232

Query: 999  TPPQRKGSNFDDLVMRNWKNQEMESQ---DENSEVSGL-QSESMSQRRLSWPPSVKKNGL 1166
            TPP R  S+FDDL ++  + QE+E Q   D +SEV  + Q + MS RRLSWPPSVK NG+
Sbjct: 233  TPPWRNESSFDDLAIKTARRQEIERQEADDGSSEVGDVHQVDDMSHRRLSWPPSVKHNGI 292


>ref|XP_002881256.1| hypothetical protein ARALYDRAFT_345055 [Arabidopsis lyrata subsp.
            lyrata] gi|297327095|gb|EFH57515.1| hypothetical protein
            ARALYDRAFT_345055 [Arabidopsis lyrata subsp. lyrata]
          Length = 291

 Score =  434 bits (1115), Expect = e-119
 Identities = 221/297 (74%), Positives = 251/297 (84%), Gaps = 1/297 (0%)
 Frame = +3

Query: 279  MSLGSDTTWVGKKPLRRLGGMSDALSIASDLGFILPPPPTQEDLQNLATTTGDKSDDLIR 458
            MS+GSDTTWVGKKP+RR+GG+SDALSIASDLGF + PPP+ E+LQ+LAT+ G+K DDLIR
Sbjct: 1    MSMGSDTTWVGKKPIRRIGGLSDALSIASDLGFAVAPPPSHEELQSLATSNGEKGDDLIR 60

Query: 459  VLRELTTAQRKIADLQVELQGRKDDKNVAYLTHVSEMEKKCETLARITSILKDVIQNKDR 638
            VLREL+  QRKIADLQVELQGRKDDKNVA+LTHVSEM+KK ETL+RIT ILKDVIQNKDR
Sbjct: 61   VLRELSAVQRKIADLQVELQGRKDDKNVAHLTHVSEMQKKIETLSRITQILKDVIQNKDR 120

Query: 639  IIARLQQPYSLDCIPVEAEYQKQFSELLFKAASDYGALTASVADFQWSQNFKEPPTVWGE 818
            IIARLQQPYSLDCIPVEAEYQKQFSELL KAASDYGALTASV+DFQWSQNFKEPP+VWGE
Sbjct: 121  IIARLQQPYSLDCIPVEAEYQKQFSELLMKAASDYGALTASVSDFQWSQNFKEPPSVWGE 180

Query: 819  MLRPIPVALASCTRFFEAMSATRETFATLQNLRVGHSSYSTTTTPANDPSRGVLGDSDCV 998
            MLRPIPVALASCTRFFEAMSA RE+FATLQ++RVG+S+ S  TTP  +       DSDCV
Sbjct: 181  MLRPIPVALASCTRFFEAMSAMRESFATLQDIRVGNSAVSLPTTPGGNEM--THRDSDCV 238

Query: 999  TPPQ-RKGSNFDDLVMRNWKNQEMESQDENSEVSGLQSESMSQRRLSWPPSVKKNGL 1166
            TPPQ R  S+FDDL + N + Q  +  +E  E       + S RRLSWPPSVKK+ +
Sbjct: 239  TPPQGRIESSFDDLAVHNTRRQNNDKNEEEEE----DGNNNSNRRLSWPPSVKKSSV 291


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